RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 HMCN2Q8NDA2 5059 aa14.15□□□□□ -0.14
VEGFA-209ENST00000425836 SPAG11AQ6PDA7 123 aa14.15□□□□□ -0.14
VEGFA-209ENST00000425836 SNHG12Q9BXW3 62 aa14.14□□□□□ -0.15
VEGFA-209ENST00000425836 BATFQ16520 125 aa14.13□□□□□ -0.15
VEGFA-209ENST00000425836 C4orf48Q5BLP8 95 aa14.13□□□□□ -0.15
VEGFA-209ENST00000425836 PPDPFLQ8WWR9 84 aa14.1□□□□□ -0.15
VEGFA-209ENST00000425836 SCGB1C2P0DMR2 95 aa14.09□□□□□ -0.15
VEGFA-209ENST00000425836 OCIAD2Q56VL3 154 aa14.09□□□□□ -0.15
VEGFA-209ENST00000425836 SPINK1P00995 79 aa14.07□□□□□ -0.16
VEGFA-209ENST00000425836 NAA38Q9BRA0 125 aaKnown RBP14.06□□□□□ -0.16
VEGFA-209ENST00000425836 F8WEM9 126 aa14.03□□□□□ -0.16
VEGFA-209ENST00000425836 DNAL4O96015 105 aa14.02□□□□□ -0.16
VEGFA-209ENST00000425836 LST1O00453 97 aa14□□□□□ -0.17
VEGFA-209ENST00000425836 A0A0G2JQZ4 141 aa14□□□□□ -0.17
VEGFA-209ENST00000425836 GHRHP01286 108 aa14□□□□□ -0.17
VEGFA-209ENST00000425836 IGLV8-61A0A075B6I0 122 aa13.99□□□□□ -0.17
VEGFA-209ENST00000425836 TRACP01848 142 aa13.99□□□□□ -0.17
VEGFA-209ENST00000425836 RPS29P62273 56 aaKnown RBP13.99□□□□□ -0.17
VEGFA-209ENST00000425836 COL5A1-AS1Q5SY13 56 aa13.98□□□□□ -0.17
VEGFA-209ENST00000425836 HRCT1Q6UXD1 115 aa13.98□□□□□ -0.17
VEGFA-209ENST00000425836 RETNLBQ9BQ08 111 aa13.98□□□□□ -0.17
VEGFA-209ENST00000425836 FABP2P12104 132 aa13.97□□□□□ -0.17
VEGFA-209ENST00000425836 ORMDL1Q9P0S3 153 aa13.97□□□□□ -0.17
VEGFA-209ENST00000425836 PRR4Q16378 134 aa13.96□□□□□ -0.17
VEGFA-209ENST00000425836 NDUFV3P56181 108 aaKnown RBP13.96□□□□□ -0.18
VEGFA-209ENST00000425836 TAX1BP3O14907 124 aa13.95□□□□□ -0.18
VEGFA-209ENST00000425836 CD164Q04900 197 aa13.95□□□□□ -0.18
VEGFA-209ENST00000425836 H3BUT2 72 aa13.94□□□□□ -0.18
VEGFA-209ENST00000425836 Q6JHZ5 121 aa13.94□□□□□ -0.18
VEGFA-209ENST00000425836 TCL1BO95988 128 aa13.93□□□□□ -0.18
VEGFA-209ENST00000425836 H3BQ85 93 aa13.92□□□□□ -0.18
VEGFA-209ENST00000425836 C9orf118A6NHY6 69 aa13.92□□□□□ -0.18
VEGFA-209ENST00000425836 IGFL1Q6UW32 110 aa13.92□□□□□ -0.18
VEGFA-209ENST00000425836 ATXN8Q156A1 80 aa13.91□□□□□ -0.18
VEGFA-209ENST00000425836 TMEM256-PLSCR3K7ERE1 68 aa13.9□□□□□ -0.18
VEGFA-209ENST00000425836 LYRM7Q5U5X0 104 aa13.88□□□□□ -0.19
VEGFA-209ENST00000425836 H3BMG7 143 aa13.88□□□□□ -0.19
VEGFA-209ENST00000425836 LIMD2Q9BT23 127 aa13.86□□□□□ -0.19
VEGFA-209ENST00000425836 TRBV20-1A0A075B6N2 111 aa13.83□□□□□ -0.19
VEGFA-209ENST00000425836 UBE2V1Q13404 147 aa13.83□□□□□ -0.19
VEGFA-209ENST00000425836 A0A1W2PPM0 123 aa13.83□□□□□ -0.2
VEGFA-209ENST00000425836 BAALC-AS2P0C853 105 aa13.83□□□□□ -0.2
VEGFA-209ENST00000425836 LPAP08519 4548 aa13.82□□□□□ -0.2
VEGFA-209ENST00000425836 IGLV7-46A0A075B6I9 117 aa13.81□□□□□ -0.2
VEGFA-209ENST00000425836 Q5XG85 94 aa13.81□□□□□ -0.2
VEGFA-209ENST00000425836 FP248Q71RG6 208 aaPredicted RBP13.81□□□□□ -0.2
VEGFA-209ENST00000425836 LRP2P98164 4655 aa13.81□□□□□ -0.2
VEGFA-209ENST00000425836 TRBV7-7A0A0K0K1E9 115 aa13.78□□□□□ -0.2
VEGFA-209ENST00000425836 A0A1B0GV72 72 aa13.78□□□□□ -0.2
VEGFA-209ENST00000425836 ANKRD29Q8N6D5 301 aa13.76□□□□□ -0.21
VEGFA-209ENST00000425836 Q6Q795 121 aa13.75□□□□□ -0.21
VEGFA-209ENST00000425836 TEN1Q86WV5 123 aa13.72□□□□□ -0.21
VEGFA-209ENST00000425836 C9JAW5 83 aa13.71□□□□□ -0.21
VEGFA-209ENST00000425836 A0A1W2PNM2 257 aa13.7□□□□□ -0.22
VEGFA-209ENST00000425836 TPRXLQ17RH7 258 aa13.69□□□□□ -0.22
VEGFA-209ENST00000425836 C1orf195Q5TG92 126 aa13.69□□□□□ -0.22
VEGFA-209ENST00000425836 RBM3P98179 157 aaKnown RBP13.68□□□□□ -0.22
VEGFA-209ENST00000425836 SPCS1Q9Y6A9 102 aa13.67□□□□□ -0.22
VEGFA-209ENST00000425836 TRBV7-4A0A0J9YYF1 115 aa13.66□□□□□ -0.22
VEGFA-209ENST00000425836 A0A1B0GV90 55 aa13.66□□□□□ -0.22
VEGFA-209ENST00000425836 ASB16-AS1Q495Z4 193 aa13.66□□□□□ -0.22
VEGFA-209ENST00000425836 A0A087WSZ3 146 aa13.62□□□□□ -0.23
VEGFA-209ENST00000425836 KRTAP13-3Q3SY46 172 aa13.62□□□□□ -0.23
VEGFA-209ENST00000425836 UBR4Q5T4S7 5183 aa13.62□□□□□ -0.23
VEGFA-209ENST00000425836 DSCR8Q96T75 97 aa13.62□□□□□ -0.23
VEGFA-209ENST00000425836 MTURNQ8N3F0 131 aa13.62□□□□□ -0.23
VEGFA-209ENST00000425836 CCKP06307 115 aa13.61□□□□□ -0.23
VEGFA-209ENST00000425836 JMJD7-PLA2G4BH0Y9G9 81 aa13.6□□□□□ -0.23
VEGFA-209ENST00000425836 H3BT86 120 aa13.59□□□□□ -0.23
VEGFA-209ENST00000425836 K7EP34 96 aa13.58□□□□□ -0.23
VEGFA-209ENST00000425836 CDIP1Q9H305 208 aa13.58□□□□□ -0.23
VEGFA-209ENST00000425836 SS18L2Q9UHA2 77 aa13.58□□□□□ -0.23
VEGFA-209ENST00000425836 OBSCN-AS1Q96MR7 158 aa13.56□□□□□ -0.24
VEGFA-209ENST00000425836 VPS25Q9BRG1 176 aa13.54□□□□□ -0.24
VEGFA-209ENST00000425836 GTF2H5Q6ZYL4 71 aa13.54□□□□□ -0.24
VEGFA-209ENST00000425836 LOC110117498A0A087WWA1 95 aa13.52□□□□□ -0.25
VEGFA-209ENST00000425836 C14orf132Q9NPU4 83 aa13.51□□□□□ -0.25
VEGFA-209ENST00000425836 Q6ZQT0 140 aa13.5□□□□□ -0.25
VEGFA-209ENST00000425836 SMCPP49901 116 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-209ENST00000425836 PDE6GP18545 87 aa13.48□□□□□ -0.25
VEGFA-209ENST00000425836 Q96NJ1 140 aa13.47□□□□□ -0.25
VEGFA-209ENST00000425836 PRO0461Q9UI25 63 aa13.46□□□□□ -0.25
VEGFA-209ENST00000425836 C9orf92A6NGG3 77 aa13.45□□□□□ -0.26
VEGFA-209ENST00000425836 XP32Q5T750 250 aa13.41□□□□□ -0.26
VEGFA-209ENST00000425836 C21orf62-AS1Q17RA5 79 aa13.39□□□□□ -0.27
VEGFA-209ENST00000425836 LINC00472Q9H8W2 130 aa13.39□□□□□ -0.27
VEGFA-209ENST00000425836 A0A1B0GW54 56 aa13.37□□□□□ -0.27
VEGFA-209ENST00000425836 MUC17Q685J3 4493 aa13.36□□□□□ -0.27
VEGFA-209ENST00000425836 F8W1H4 67 aa13.35□□□□□ -0.27
VEGFA-209ENST00000425836 DEFB116Q30KQ4 102 aa13.34□□□□□ -0.27
VEGFA-209ENST00000425836 IGKV4-1P06312 121 aa13.33□□□□□ -0.28
VEGFA-209ENST00000425836 RNF213Q63HN8 5207 aa13.32□□□□□ -0.28
VEGFA-209ENST00000425836 SIGMAR1Q99720 223 aa13.32□□□□□ -0.28
VEGFA-209ENST00000425836 SEC61BP60468 96 aaKnown RBP13.24□□□□□ -0.29
VEGFA-209ENST00000425836 J3KT08 172 aa13.2□□□□□ -0.3
VEGFA-209ENST00000425836 NREPQ16612 68 aa13.2□□□□□ -0.3
VEGFA-209ENST00000425836 ETDBQ3ZM63 59 aa13.2□□□□□ -0.3
VEGFA-209ENST00000425836 DSCR10P59022 87 aa13.19□□□□□ -0.3
VEGFA-209ENST00000425836 RPL37P61927 97 aaKnown RBP13.17□□□□□ -0.3
VEGFA-209ENST00000425836 MUC2Q02817 5179 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms