RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SCXQ7RTU7 201 aa9.32□□□□□ -0.92
ACTB-204ENST00000425660 LINC00846Q9NV44 126 aa9.31□□□□□ -0.92
ACTB-204ENST00000425660 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
ACTB-204ENST00000425660 MT-ATP8P03928 68 aa9.29□□□□□ -0.92
ACTB-204ENST00000425660 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
ACTB-204ENST00000425660 A0A1B0GVY2 172 aa9.28□□□□□ -0.92
ACTB-204ENST00000425660 ZNF861PO60384 105 aa9.28□□□□□ -0.92
ACTB-204ENST00000425660 LINC00643Q86TS7 51 aa9.28□□□□□ -0.92
ACTB-204ENST00000425660 IGLV8-61A0A075B6I0 122 aa9.26□□□□□ -0.93
ACTB-204ENST00000425660 IGLV7-43P04211 117 aa9.24□□□□□ -0.93
ACTB-204ENST00000425660 F8WEM9 126 aa9.24□□□□□ -0.93
ACTB-204ENST00000425660 LINC00483Q53H64 154 aa9.23□□□□□ -0.93
ACTB-204ENST00000425660 SPRR4Q96PI1 79 aa9.23□□□□□ -0.93
ACTB-204ENST00000425660 A0A1B0GW54 56 aa9.22□□□□□ -0.93
ACTB-204ENST00000425660 ZNF706Q9Y5V0 76 aaPredicted RBP9.21□□□□□ -0.93
ACTB-204ENST00000425660 DYNC1H1Q14204 4646 aaKnown RBP9.21□□□□□ -0.93
ACTB-204ENST00000425660 HAMPP81172 84 aa9.21□□□□□ -0.94
ACTB-204ENST00000425660 UBL5Q9BZL1 73 aa9.21□□□□□ -0.94
ACTB-204ENST00000425660 TRBV7-7A0A0K0K1E9 115 aa9.2□□□□□ -0.94
ACTB-204ENST00000425660 A0A1W2PNM2 257 aa9.2□□□□□ -0.94
ACTB-204ENST00000425660 Q8NBF4 154 aa9.19□□□□□ -0.94
ACTB-204ENST00000425660 Q6JHZ5 121 aa9.19□□□□□ -0.94
ACTB-204ENST00000425660 IGFL1Q6UW32 110 aa9.19□□□□□ -0.94
ACTB-204ENST00000425660 Q6Q795 121 aa9.18□□□□□ -0.94
ACTB-204ENST00000425660 IMUPQ9GZP8 106 aa9.18□□□□□ -0.94
ACTB-204ENST00000425660 SCGB1A1P11684 91 aa9.17□□□□□ -0.94
ACTB-204ENST00000425660 Q6ZVQ6 151 aa9.17□□□□□ -0.94
ACTB-204ENST00000425660 CRYGAP11844 174 aa9.16□□□□□ -0.94
ACTB-204ENST00000425660 ATP5EP2Q5VTU8 51 aa9.16□□□□□ -0.94
ACTB-204ENST00000425660 VPS13BQ7Z7G8 4022 aa9.16□□□□□ -0.94
ACTB-204ENST00000425660 EPPK1P58107 5090 aaKnown RBP9.14□□□□□ -0.95
ACTB-204ENST00000425660 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
ACTB-204ENST00000425660 APOBP04114 4563 aaKnown RBP9.12□□□□□ -0.95
ACTB-204ENST00000425660 A0A0G2JQZ4 141 aa9.11□□□□□ -0.95
ACTB-204ENST00000425660 IGKV3D-7A0A0C4DH55 119 aa9.1□□□□□ -0.95
ACTB-204ENST00000425660 CXCL6P80162 114 aa9.09□□□□□ -0.95
ACTB-204ENST00000425660 IGLV9-49A0A0B4J1Y8 123 aa9.08□□□□□ -0.96
ACTB-204ENST00000425660 NREPQ16612 68 aa9.08□□□□□ -0.96
ACTB-204ENST00000425660 ANAPC11Q9NYG5 84 aa9.08□□□□□ -0.96
ACTB-204ENST00000425660 SVIPQ8NHG7 77 aa9.07□□□□□ -0.96
ACTB-204ENST00000425660 C9orf153Q5TBE3 101 aa9.06□□□□□ -0.96
ACTB-204ENST00000425660 PCP4P48539 62 aa9.04□□□□□ -0.96
ACTB-204ENST00000425660 MOBPQ13875 183 aa9.04□□□□□ -0.96
ACTB-204ENST00000425660 A0A087WSZ3 146 aa9.03□□□□□ -0.96
ACTB-204ENST00000425660 FAT1Q14517 4588 aa9.01□□□□□ -0.97
ACTB-204ENST00000425660 FAM229BQ4G0N7 80 aa9.01□□□□□ -0.97
ACTB-204ENST00000425660 KRTAP1-4P0C5Y4 121 aa9.01□□□□□ -0.97
ACTB-204ENST00000425660 BPY2O14599 106 aa9□□□□□ -0.97
ACTB-204ENST00000425660 HIST1H4AP62805 103 aaKnown RBP9□□□□□ -0.97
ACTB-204ENST00000425660 A0A087WVE0 104 aa8.99□□□□□ -0.97
ACTB-204ENST00000425660 FAM236AA0A1B0GUQ0 79 aa8.99□□□□□ -0.97
ACTB-204ENST00000425660 FAM236BA0A1B0GV22 79 aa8.99□□□□□ -0.97
ACTB-204ENST00000425660 SPINK6Q6UWN8 80 aa8.99□□□□□ -0.97
ACTB-204ENST00000425660 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
ACTB-204ENST00000425660 KRTAP10-4P60372 401 aaPredicted RBP8.98□□□□□ -0.97
ACTB-204ENST00000425660 SSBP3-AS1Q7Z2R9 100 aa8.98□□□□□ -0.97
ACTB-204ENST00000425660 A0A087X002 238 aa8.97□□□□□ -0.97
ACTB-204ENST00000425660 KRTAP13-2Q52LG2 175 aa8.95□□□□□ -0.98
ACTB-204ENST00000425660 CD164Q04900 197 aa8.94□□□□□ -0.98
ACTB-204ENST00000425660 LINC00472Q9H8W2 130 aa8.94□□□□□ -0.98
ACTB-204ENST00000425660 DSCR10P59022 87 aa8.94□□□□□ -0.98
ACTB-204ENST00000425660 IGKV4-1P06312 121 aa8.93□□□□□ -0.98
ACTB-204ENST00000425660 KIAA1109Q2LD37 5005 aa8.92□□□□□ -0.98
ACTB-204ENST00000425660 CDK2AP2O75956 126 aa8.91□□□□□ -0.98
ACTB-204ENST00000425660 Q8N9L7 120 aa8.91□□□□□ -0.98
ACTB-204ENST00000425660 SS18L2Q9UHA2 77 aa8.91□□□□□ -0.98
ACTB-204ENST00000425660 PLA2G1BP04054 148 aaKnown RBP8.91□□□□□ -0.98
ACTB-204ENST00000425660 HRCT1Q6UXD1 115 aa8.91□□□□□ -0.98
ACTB-204ENST00000425660 ANAPC13Q9BS18 74 aa8.9□□□□□ -0.98
ACTB-204ENST00000425660 HSPG2P98160 4391 aa8.89□□□□□ -0.99
ACTB-204ENST00000425660 ATOX1O00244 68 aa8.88□□□□□ -0.99
ACTB-204ENST00000425660 DEFB116Q30KQ4 102 aa8.88□□□□□ -0.99
ACTB-204ENST00000425660 Q96NJ1 140 aa8.88□□□□□ -0.99
ACTB-204ENST00000425660 K7EQZ3 153 aa8.87□□□□□ -0.99
ACTB-204ENST00000425660 RYR1P21817 5038 aa8.87□□□□□ -0.99
ACTB-204ENST00000425660 KRTAP17-1Q9BYP8 105 aa8.87□□□□□ -0.99
ACTB-204ENST00000425660 J3KT08 172 aa8.86□□□□□ -0.99
ACTB-204ENST00000425660 BIRC6Q9NR09 4857 aa8.84□□□□□ -0.99
ACTB-204ENST00000425660 A8MWP4 228 aa8.84□□□□□ -0.99
ACTB-204ENST00000425660 Q5XG85 94 aa8.84□□□□□ -0.99
ACTB-204ENST00000425660 FAM229AH3BQW9 127 aa8.83□□□□□ -1
ACTB-204ENST00000425660 ASB16-AS1Q495Z4 193 aa8.83□□□□□ -1
ACTB-204ENST00000425660 TYMSOSQ8TAI1 123 aa8.82□□□□□ -1
ACTB-204ENST00000425660 PRR15Q8IV56 129 aa8.81□□□□□ -1
ACTB-204ENST00000425660 PRR26Q8N8Z3 221 aa8.79□□□□□ -1
ACTB-204ENST00000425660 Q5VSD8 79 aa8.77□□□□□ -1
ACTB-204ENST00000425660 HCG22E2RYF7 251 aa8.77□□□□□ -1.01
ACTB-204ENST00000425660 SERP2Q8N6R1 65 aa8.77□□□□□ -1.01
ACTB-204ENST00000425660 PKHD1L1Q86WI1 4243 aa8.76□□□□□ -1.01
ACTB-204ENST00000425660 SPINK1P00995 79 aa8.76□□□□□ -1.01
ACTB-204ENST00000425660 SMIM20Q8N5G0 67 aa8.76□□□□□ -1.01
ACTB-204ENST00000425660 NDUFB1O75438 58 aa8.75□□□□□ -1.01
ACTB-204ENST00000425660 COX7CP15954 63 aa8.75□□□□□ -1.01
ACTB-204ENST00000425660 LIMD2Q9BT23 127 aa8.75□□□□□ -1.01
ACTB-204ENST00000425660 RPS29P62273 56 aaKnown RBP8.74□□□□□ -1.01
ACTB-204ENST00000425660 UQCRQO14949 82 aa8.73□□□□□ -1.01
ACTB-204ENST00000425660 C4orf48Q5BLP8 95 aa8.73□□□□□ -1.01
ACTB-204ENST00000425660 KRTAP29-1A8MX34 341 aaPredicted RBP8.73□□□□□ -1.01
ACTB-204ENST00000425660 SPAG11AQ6PDA7 123 aa8.73□□□□□ -1.01
ACTB-204ENST00000425660 TRAV7A0A075B6U4 112 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms