RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 Q8NBF4 154 aa17.81■□□□□ 0.44
CSNK1E-206ENST00000413574 A0A1B0GX51 115 aa17.8■□□□□ 0.44
CSNK1E-206ENST00000413574 LINC00304Q8N9R0 145 aa17.79■□□□□ 0.44
CSNK1E-206ENST00000413574 SSBP3-AS1Q7Z2R9 100 aa17.75■□□□□ 0.43
CSNK1E-206ENST00000413574 TAX1BP3O14907 124 aa17.72■□□□□ 0.43
CSNK1E-206ENST00000413574 H3BUT2 72 aa17.72■□□□□ 0.43
CSNK1E-206ENST00000413574 LST1O00453 97 aa17.7■□□□□ 0.42
CSNK1E-206ENST00000413574 DNAL4O96015 105 aa17.7■□□□□ 0.42
CSNK1E-206ENST00000413574 OCIAD2Q56VL3 154 aa17.7■□□□□ 0.42
CSNK1E-206ENST00000413574 PPDPFLQ8WWR9 84 aa17.69■□□□□ 0.42
CSNK1E-206ENST00000413574 C9orf118A6NHY6 69 aa17.67■□□□□ 0.42
CSNK1E-206ENST00000413574 TCL1BO95988 128 aa17.66■□□□□ 0.42
CSNK1E-206ENST00000413574 TRACP01848 142 aa17.65■□□□□ 0.42
CSNK1E-206ENST00000413574 A0A0G2JQZ4 141 aa17.65■□□□□ 0.42
CSNK1E-206ENST00000413574 C4orf48Q5BLP8 95 aa17.65■□□□□ 0.42
CSNK1E-206ENST00000413574 F8WEM9 126 aa17.64■□□□□ 0.41
CSNK1E-206ENST00000413574 FABP2P12104 132 aa17.63■□□□□ 0.41
CSNK1E-206ENST00000413574 ORMDL1Q9P0S3 153 aa17.63■□□□□ 0.41
CSNK1E-206ENST00000413574 SPAG11AQ6PDA7 123 aa17.62■□□□□ 0.41
CSNK1E-206ENST00000413574 HMCN2Q8NDA2 5059 aa17.61■□□□□ 0.41
CSNK1E-206ENST00000413574 COL5A1-AS1Q5SY13 56 aa17.59■□□□□ 0.41
CSNK1E-206ENST00000413574 ATXN8Q156A1 80 aa17.58■□□□□ 0.41
CSNK1E-206ENST00000413574 HRCT1Q6UXD1 115 aa17.58■□□□□ 0.41
CSNK1E-206ENST00000413574 NDUFV3P56181 108 aaKnown RBP17.58■□□□□ 0.4
CSNK1E-206ENST00000413574 GHRHP01286 108 aa17.57■□□□□ 0.4
CSNK1E-206ENST00000413574 A0A1W2PPM0 123 aa17.56■□□□□ 0.4
CSNK1E-206ENST00000413574 LYRM7Q5U5X0 104 aa17.56■□□□□ 0.4
CSNK1E-206ENST00000413574 SPINK1P00995 79 aa17.55■□□□□ 0.4
CSNK1E-206ENST00000413574 IGLV8-61A0A075B6I0 122 aa17.54■□□□□ 0.4
CSNK1E-206ENST00000413574 TMEM256-PLSCR3K7ERE1 68 aa17.51■□□□□ 0.39
CSNK1E-206ENST00000413574 TRBV20-1A0A075B6N2 111 aa17.5■□□□□ 0.39
CSNK1E-206ENST00000413574 IGFL1Q6UW32 110 aa17.5■□□□□ 0.39
CSNK1E-206ENST00000413574 RETNLBQ9BQ08 111 aa17.5■□□□□ 0.39
CSNK1E-206ENST00000413574 H3BMG7 143 aa17.48■□□□□ 0.39
CSNK1E-206ENST00000413574 H3BQ85 93 aa17.48■□□□□ 0.39
CSNK1E-206ENST00000413574 A0A1B0GV72 72 aa17.47■□□□□ 0.39
CSNK1E-206ENST00000413574 BAALC-AS2P0C853 105 aa17.47■□□□□ 0.39
CSNK1E-206ENST00000413574 Q6JHZ5 121 aa17.47■□□□□ 0.39
CSNK1E-206ENST00000413574 CD164Q04900 197 aa17.43■□□□□ 0.38
CSNK1E-206ENST00000413574 UBE2V1Q13404 147 aa17.43■□□□□ 0.38
CSNK1E-206ENST00000413574 RPS29P62273 56 aaKnown RBP17.42■□□□□ 0.38
CSNK1E-206ENST00000413574 C9JAW5 83 aa17.39■□□□□ 0.38
CSNK1E-206ENST00000413574 PRR4Q16378 134 aa17.39■□□□□ 0.38
CSNK1E-206ENST00000413574 SPCS1Q9Y6A9 102 aa17.39■□□□□ 0.37
CSNK1E-206ENST00000413574 ANKRD29Q8N6D5 301 aa17.38■□□□□ 0.37
CSNK1E-206ENST00000413574 MTURNQ8N3F0 131 aa17.34■□□□□ 0.37
CSNK1E-206ENST00000413574 LPAP08519 4548 aa17.34■□□□□ 0.37
CSNK1E-206ENST00000413574 LIMD2Q9BT23 127 aa17.32■□□□□ 0.36
CSNK1E-206ENST00000413574 TRBV7-7A0A0K0K1E9 115 aa17.29■□□□□ 0.36
CSNK1E-206ENST00000413574 LRP2P98164 4655 aa17.25■□□□□ 0.35
CSNK1E-206ENST00000413574 RBM3P98179 157 aaKnown RBP17.25■□□□□ 0.35
CSNK1E-206ENST00000413574 A0A1W2PNM2 257 aa17.25■□□□□ 0.35
CSNK1E-206ENST00000413574 TEN1Q86WV5 123 aa17.24■□□□□ 0.35
CSNK1E-206ENST00000413574 K7EP34 96 aa17.23■□□□□ 0.35
CSNK1E-206ENST00000413574 Q5XG85 94 aa17.23■□□□□ 0.35
CSNK1E-206ENST00000413574 Q6Q795 121 aa17.22■□□□□ 0.35
CSNK1E-206ENST00000413574 TRBV7-4A0A0J9YYF1 115 aa17.21■□□□□ 0.35
CSNK1E-206ENST00000413574 IGLV7-46A0A075B6I9 117 aa17.2■□□□□ 0.34
CSNK1E-206ENST00000413574 H3BT86 120 aa17.2■□□□□ 0.34
CSNK1E-206ENST00000413574 DSCR8Q96T75 97 aa17.18■□□□□ 0.34
CSNK1E-206ENST00000413574 FP248Q71RG6 208 aaPredicted RBP17.17■□□□□ 0.34
CSNK1E-206ENST00000413574 CCKP06307 115 aa17.16■□□□□ 0.34
CSNK1E-206ENST00000413574 JMJD7-PLA2G4BH0Y9G9 81 aa17.15■□□□□ 0.34
CSNK1E-206ENST00000413574 C1orf195Q5TG92 126 aa17.14■□□□□ 0.33
CSNK1E-206ENST00000413574 A0A087WSZ3 146 aa17.14■□□□□ 0.33
CSNK1E-206ENST00000413574 SMCPP49901 116 aaPredicted RBP17.13■□□□□ 0.33
CSNK1E-206ENST00000413574 VPS25Q9BRG1 176 aa17.12■□□□□ 0.33
CSNK1E-206ENST00000413574 OBSCN-AS1Q96MR7 158 aa17.11■□□□□ 0.33
CSNK1E-206ENST00000413574 GTF2H5Q6ZYL4 71 aa17.1■□□□□ 0.33
CSNK1E-206ENST00000413574 C14orf132Q9NPU4 83 aa17.1■□□□□ 0.33
CSNK1E-206ENST00000413574 PRO0461Q9UI25 63 aa17.1■□□□□ 0.33
CSNK1E-206ENST00000413574 ASB16-AS1Q495Z4 193 aa17.07■□□□□ 0.32
CSNK1E-206ENST00000413574 Q6ZQT0 140 aa17.05■□□□□ 0.32
CSNK1E-206ENST00000413574 SS18L2Q9UHA2 77 aa17.04■□□□□ 0.32
CSNK1E-206ENST00000413574 LOC110117498A0A087WWA1 95 aa17.03■□□□□ 0.32
CSNK1E-206ENST00000413574 TPRXLQ17RH7 258 aa17.02■□□□□ 0.31
CSNK1E-206ENST00000413574 UBR4Q5T4S7 5183 aa17.02■□□□□ 0.31
CSNK1E-206ENST00000413574 KRTAP13-3Q3SY46 172 aa16.99■□□□□ 0.31
CSNK1E-206ENST00000413574 PDE6GP18545 87 aa16.96■□□□□ 0.3
CSNK1E-206ENST00000413574 Q96NJ1 140 aa16.94■□□□□ 0.3
CSNK1E-206ENST00000413574 CDIP1Q9H305 208 aa16.92■□□□□ 0.3
CSNK1E-206ENST00000413574 F8W1H4 67 aa16.9■□□□□ 0.3
CSNK1E-206ENST00000413574 A0A1B0GV90 55 aa16.88■□□□□ 0.29
CSNK1E-206ENST00000413574 C9orf92A6NGG3 77 aa16.87■□□□□ 0.29
CSNK1E-206ENST00000413574 DEFB116Q30KQ4 102 aa16.85■□□□□ 0.29
CSNK1E-206ENST00000413574 LINC00472Q9H8W2 130 aa16.82■□□□□ 0.28
CSNK1E-206ENST00000413574 A0A1B0GW54 56 aa16.79■□□□□ 0.28
CSNK1E-206ENST00000413574 ETDBQ3ZM63 59 aa16.79■□□□□ 0.28
CSNK1E-206ENST00000413574 C21orf62-AS1Q17RA5 79 aa16.78■□□□□ 0.28
CSNK1E-206ENST00000413574 IGKV4-1P06312 121 aa16.77■□□□□ 0.27
CSNK1E-206ENST00000413574 SIGMAR1Q99720 223 aa16.76■□□□□ 0.27
CSNK1E-206ENST00000413574 XP32Q5T750 250 aa16.74■□□□□ 0.27
CSNK1E-206ENST00000413574 MUC17Q685J3 4493 aa16.67■□□□□ 0.26
CSNK1E-206ENST00000413574 RNF213Q63HN8 5207 aa16.65■□□□□ 0.26
CSNK1E-206ENST00000413574 NREPQ16612 68 aa16.65■□□□□ 0.26
CSNK1E-206ENST00000413574 DSCR10P59022 87 aa16.59■□□□□ 0.25
CSNK1E-206ENST00000413574 J3KT08 172 aa16.58■□□□□ 0.24
CSNK1E-206ENST00000413574 IGHV6-1A0A0B4J1U7 121 aa16.55■□□□□ 0.24
CSNK1E-206ENST00000413574 LINC00846Q9NV44 126 aa16.54■□□□□ 0.24
CSNK1E-206ENST00000413574 NOTCH2NLQ7Z3S9 236 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms