RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 KRTAP10-1P60331 282 aa11.04□□□□□ -0.64
HCG11-201ENST00000411553 STAB1Q9NY15 2570 aa11.01□□□□□ -0.65
HCG11-201ENST00000411553 KRTAP10-2P60368 255 aa10.99□□□□□ -0.65
HCG11-201ENST00000411553 KRTAP26-1Q6PEX3 210 aa10.99□□□□□ -0.65
HCG11-201ENST00000411553 CFAP46Q8IYW2 2715 aa10.97□□□□□ -0.65
HCG11-201ENST00000411553 Q5VV11 94 aa10.91□□□□□ -0.66
HCG11-201ENST00000411553 PRAC1Q96KF2 57 aa10.9□□□□□ -0.66
HCG11-201ENST00000411553 FP248Q71RG6 208 aaPredicted RBP10.89□□□□□ -0.67
HCG11-201ENST00000411553 RPL37P61927 97 aaKnown RBP10.88□□□□□ -0.67
HCG11-201ENST00000411553 M0QZ58 72 aa10.88□□□□□ -0.67
HCG11-201ENST00000411553 Q5XG85 94 aa10.88□□□□□ -0.67
HCG11-201ENST00000411553 CYSTM1Q9H1C7 97 aa10.87□□□□□ -0.67
HCG11-201ENST00000411553 DNAH12Q6ZR08 3092 aa10.83□□□□□ -0.68
HCG11-201ENST00000411553 FLG2Q5D862 2391 aaPredicted RBP10.83□□□□□ -0.68
HCG11-201ENST00000411553 OXTP01178 125 aa10.82□□□□□ -0.68
HCG11-201ENST00000411553 H1FX-AS1Q4G0G2 97 aa10.81□□□□□ -0.68
HCG11-201ENST00000411553 ROMO1P60602 79 aa10.8□□□□□ -0.68
HCG11-201ENST00000411553 A0A0A0MQY5 61 aa10.79□□□□□ -0.68
HCG11-201ENST00000411553 PANO1I0J062 215 aa10.78□□□□□ -0.68
HCG11-201ENST00000411553 Q6ZR54 194 aa10.78□□□□□ -0.68
HCG11-201ENST00000411553 PLAC4Q8WY50 150 aa10.77□□□□□ -0.69
HCG11-201ENST00000411553 CEP350Q5VT06 3117 aa10.76□□□□□ -0.69
HCG11-201ENST00000411553 KRTAP4-16G5E9R7 235 aaPredicted RBP10.74□□□□□ -0.69
HCG11-201ENST00000411553 ADM2Q7Z4H4 148 aa10.74□□□□□ -0.69
HCG11-201ENST00000411553 NBEAL1Q6ZS30 2694 aa10.74□□□□□ -0.69
HCG11-201ENST00000411553 AKAP13Q12802 2813 aa10.74□□□□□ -0.69
HCG11-201ENST00000411553 CENPEQ02224 2701 aa10.73□□□□□ -0.69
HCG11-201ENST00000411553 TEX15Q9BXT5 2789 aa10.71□□□□□ -0.69
HCG11-201ENST00000411553 A0A087X002 238 aa10.71□□□□□ -0.69
HCG11-201ENST00000411553 TEP1Q99973 2627 aaKnown RBP10.7□□□□□ -0.7
HCG11-201ENST00000411553 CHD6Q8TD26 2715 aa10.69□□□□□ -0.7
HCG11-201ENST00000411553 KRTAP29-1A8MX34 341 aaPredicted RBP10.64□□□□□ -0.71
HCG11-201ENST00000411553 SPATA8Q6RVD6 105 aa10.64□□□□□ -0.71
HCG11-201ENST00000411553 SETXQ7Z333 2677 aaKnown RBP10.64□□□□□ -0.71
HCG11-201ENST00000411553 C5orf42Q9H799 3197 aa10.62□□□□□ -0.71
HCG11-201ENST00000411553 COL6A5A8TX70 2615 aa10.57□□□□□ -0.72
HCG11-201ENST00000411553 CHD7Q9P2D1 2997 aa10.55□□□□□ -0.72
HCG11-201ENST00000411553 DMBT1Q9UGM3 2413 aaPredicted RBP10.55□□□□□ -0.72
HCG11-201ENST00000411553 RPS29P62273 56 aaKnown RBP10.55□□□□□ -0.72
HCG11-201ENST00000411553 UNC79Q9P2D8 2635 aa10.54□□□□□ -0.72
HCG11-201ENST00000411553 NOTCH2NLQ7Z3S9 236 aa10.53□□□□□ -0.72
HCG11-201ENST00000411553 ASB16-AS1Q495Z4 193 aa10.53□□□□□ -0.72
HCG11-201ENST00000411553 H3BS24 57 aa10.52□□□□□ -0.73
HCG11-201ENST00000411553 Q6ZRN7 208 aaPredicted RBP10.48□□□□□ -0.73
HCG11-201ENST00000411553 GCN1Q92616 2671 aaKnown RBP10.47□□□□□ -0.73
HCG11-201ENST00000411553 KRTAP11-1Q8IUC1 163 aa10.47□□□□□ -0.73
HCG11-201ENST00000411553 NOTCH1P46531 2555 aa10.45□□□□□ -0.74
HCG11-201ENST00000411553 A8MUU9 505 aa10.41□□□□□ -0.74
HCG11-201ENST00000411553 UTRNP46939 3433 aa10.4□□□□□ -0.75
HCG11-201ENST00000411553 MGAQ8IWI9 3026 aa10.38□□□□□ -0.75
HCG11-201ENST00000411553 STAB2Q8WWQ8 2551 aa10.37□□□□□ -0.75
HCG11-201ENST00000411553 KRTAP13-2Q52LG2 175 aa10.35□□□□□ -0.75
HCG11-201ENST00000411553 CHD9Q3L8U1 2897 aa10.35□□□□□ -0.75
HCG11-201ENST00000411553 PCNTO95613 3336 aa10.35□□□□□ -0.75
HCG11-201ENST00000411553 ZNF292O60281 2723 aa10.34□□□□□ -0.75
HCG11-201ENST00000411553 KRTAP7-1Q8IUC3 87 aa10.33□□□□□ -0.76
HCG11-201ENST00000411553 BAHCC1Q9P281 2608 aa10.32□□□□□ -0.76
HCG11-201ENST00000411553 C20orf166-AS1Q96NR2 134 aa10.31□□□□□ -0.76
HCG11-201ENST00000411553 A8MU10 97 aa10.3□□□□□ -0.76
HCG11-201ENST00000411553 KRTAP13-1Q8IUC0 172 aa10.27□□□□□ -0.76
HCG11-201ENST00000411553 CFAP54Q96N23 3096 aa10.27□□□□□ -0.77
HCG11-201ENST00000411553 NBEAL2Q6ZNJ1 2754 aa10.25□□□□□ -0.77
HCG11-201ENST00000411553 KRTAP25-1Q3LHN0 102 aa10.2□□□□□ -0.78
HCG11-201ENST00000411553 A0A0C4DFX4 3053 aa10.2□□□□□ -0.78
HCG11-201ENST00000411553 UBR5O95071 2799 aaPredicted RBP10.19□□□□□ -0.78
HCG11-201ENST00000411553 IGSF10Q6WRI0 2623 aa10.18□□□□□ -0.78
HCG11-201ENST00000411553 NSD1Q96L73 2696 aaPredicted RBP10.17□□□□□ -0.78
HCG11-201ENST00000411553 KRTAP21-3Q3LHN1 58 aa10.13□□□□□ -0.79
HCG11-201ENST00000411553 MAP1AP78559 2803 aaPredicted RBP10.12□□□□□ -0.79
HCG11-201ENST00000411553 ITPR2Q14571 2701 aa10.11□□□□□ -0.79
HCG11-201ENST00000411553 A6NN06 94 aa10.11□□□□□ -0.79
HCG11-201ENST00000411553 TNP1P09430 55 aa10.1□□□□□ -0.79
HCG11-201ENST00000411553 RANBP2P49792 3224 aaKnown RBP10.09□□□□□ -0.79
HCG11-201ENST00000411553 DSPP15924 2871 aaKnown RBP10.08□□□□□ -0.8
HCG11-201ENST00000411553 TRANK1O15050 2925 aa10.07□□□□□ -0.8
HCG11-201ENST00000411553 KRTAP16-1A8MUX0 517 aa10.04□□□□□ -0.8
HCG11-201ENST00000411553 HTTP42858 3142 aa10.04□□□□□ -0.8
HCG11-201ENST00000411553 WDFY4Q6ZS81 3184 aa10.02□□□□□ -0.81
HCG11-201ENST00000411553 FRYQ5TBA9 3013 aa10.01□□□□□ -0.81
HCG11-201ENST00000411553 ITPR1Q14643 2758 aa9.91□□□□□ -0.82
HCG11-201ENST00000411553 KMT2BQ9UMN6 2715 aaPredicted RBP9.9□□□□□ -0.82
HCG11-201ENST00000411553 LAMA3Q16787 3333 aa9.89□□□□□ -0.83
HCG11-201ENST00000411553 C10orf95Q9H7T3 257 aa9.89□□□□□ -0.83
HCG11-201ENST00000411553 PRUNE2Q8WUY3 3088 aa9.88□□□□□ -0.83
HCG11-201ENST00000411553 NDUFAF8A1L188 74 aa9.87□□□□□ -0.83
HCG11-201ENST00000411553 MKI67P46013 3256 aaKnown RBP9.86□□□□□ -0.83
HCG11-201ENST00000411553 XP32Q5T750 250 aa9.85□□□□□ -0.83
HCG11-201ENST00000411553 KRTAP10-8P60410 259 aa9.82□□□□□ -0.84
HCG11-201ENST00000411553 TRIOO75962 3097 aa9.82□□□□□ -0.84
HCG11-201ENST00000411553 KRTAP1-4P0C5Y4 121 aa9.8□□□□□ -0.84
HCG11-201ENST00000411553 LAMA2P24043 3122 aaKnown RBP9.79□□□□□ -0.84
HCG11-201ENST00000411553 A0A1B0GVY2 172 aa9.79□□□□□ -0.84
HCG11-201ENST00000411553 PP632Q6XCG6 107 aa9.76□□□□□ -0.85
HCG11-201ENST00000411553 UTP20O75691 2785 aaKnown RBP9.74□□□□□ -0.85
HCG11-201ENST00000411553 APCP25054 2843 aa9.73□□□□□ -0.85
HCG11-201ENST00000411553 TENM4Q6N022 2769 aa9.7□□□□□ -0.86
HCG11-201ENST00000411553 TACC2O95359 2948 aa9.69□□□□□ -0.86
HCG11-201ENST00000411553 TPRXLQ17RH7 258 aa9.69□□□□□ -0.86
HCG11-201ENST00000411553 HIVEP1P15822 2718 aa9.68□□□□□ -0.86
HCG11-201ENST00000411553 BRCA2P51587 3418 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms