RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 SPRR1BP22528 89 aa11.94□□□□□ -0.5
LMO2-203ENST00000411482 ANAPC13Q9BS18 74 aa11.94□□□□□ -0.5
LMO2-203ENST00000411482 BCE1O60756 84 aa11.93□□□□□ -0.5
LMO2-203ENST00000411482 C3orf22Q8N5N4 141 aa11.93□□□□□ -0.5
LMO2-203ENST00000411482 PLAC8Q9NZF1 115 aa11.93□□□□□ -0.5
LMO2-203ENST00000411482 DYNC1H1Q14204 4646 aaKnown RBP11.93□□□□□ -0.5
LMO2-203ENST00000411482 IGLV8-61A0A075B6I0 122 aa11.92□□□□□ -0.5
LMO2-203ENST00000411482 FAM236AA0A1B0GUQ0 79 aa11.91□□□□□ -0.5
LMO2-203ENST00000411482 FAM236BA0A1B0GV22 79 aa11.91□□□□□ -0.5
LMO2-203ENST00000411482 FUSP35637 526 aaKnown RBP eCLIP11.91□□□□□ -0.5
LMO2-203ENST00000411482 DPH3Q96FX2 82 aa11.91□□□□□ -0.5
LMO2-203ENST00000411482 DNAH5Q8TE73 4624 aa11.9□□□□□ -0.5
LMO2-203ENST00000411482 BIRC6Q9NR09 4857 aa11.9□□□□□ -0.5
LMO2-203ENST00000411482 CXCL6P80162 114 aa11.9□□□□□ -0.5
LMO2-203ENST00000411482 C1orf137Q5JT78 98 aa11.9□□□□□ -0.5
LMO2-203ENST00000411482 HIGD2AQ9BW72 106 aa11.9□□□□□ -0.5
LMO2-203ENST00000411482 IGLV5-52A0A0A0MRZ9 124 aa11.89□□□□□ -0.51
LMO2-203ENST00000411482 A0A1W2PNM2 257 aa11.89□□□□□ -0.51
LMO2-203ENST00000411482 Q8NBF4 154 aa11.87□□□□□ -0.51
LMO2-203ENST00000411482 SPRR4Q96PI1 79 aa11.87□□□□□ -0.51
LMO2-203ENST00000411482 UBE2AP49459 152 aa11.86□□□□□ -0.51
LMO2-203ENST00000411482 LRP1BQ9NZR2 4599 aa11.85□□□□□ -0.51
LMO2-203ENST00000411482 F8WEM9 126 aa11.83□□□□□ -0.52
LMO2-203ENST00000411482 HAMPP81172 84 aa11.83□□□□□ -0.52
LMO2-203ENST00000411482 A0A087WVE0 104 aa11.81□□□□□ -0.52
LMO2-203ENST00000411482 CRYGAP11844 174 aa11.81□□□□□ -0.52
LMO2-203ENST00000411482 ATOX1O00244 68 aa11.8□□□□□ -0.52
LMO2-203ENST00000411482 NREPQ16612 68 aa11.8□□□□□ -0.52
LMO2-203ENST00000411482 IGFL1Q6UW32 110 aa11.79□□□□□ -0.52
LMO2-203ENST00000411482 KRTAP10-1P60331 282 aa11.77□□□□□ -0.52
LMO2-203ENST00000411482 PSORS1C2Q9UIG4 136 aa11.77□□□□□ -0.52
LMO2-203ENST00000411482 KIAA1109Q2LD37 5005 aa11.77□□□□□ -0.53
LMO2-203ENST00000411482 LINC00483Q53H64 154 aa11.74□□□□□ -0.53
LMO2-203ENST00000411482 DNAH8Q96JB1 4490 aa11.73□□□□□ -0.53
LMO2-203ENST00000411482 APOBP04114 4563 aaKnown RBP11.72□□□□□ -0.53
LMO2-203ENST00000411482 CCDC179H3BU77 68 aa11.71□□□□□ -0.53
LMO2-203ENST00000411482 Q6ZSA8 131 aa11.71□□□□□ -0.53
LMO2-203ENST00000411482 SRRM2Q9UQ35 2752 aaKnown RBP11.71□□□□□ -0.54
LMO2-203ENST00000411482 ZNF861PO60384 105 aa11.7□□□□□ -0.54
LMO2-203ENST00000411482 BPY2O14599 106 aa11.7□□□□□ -0.54
LMO2-203ENST00000411482 FAM30AQ9NZY2 134 aa11.69□□□□□ -0.54
LMO2-203ENST00000411482 ZNF706Q9Y5V0 76 aaPredicted RBP11.69□□□□□ -0.54
LMO2-203ENST00000411482 HSPG2P98160 4391 aa11.68□□□□□ -0.54
LMO2-203ENST00000411482 UQCRQO14949 82 aa11.68□□□□□ -0.54
LMO2-203ENST00000411482 COX7CP15954 63 aa11.68□□□□□ -0.54
LMO2-203ENST00000411482 SCXQ7RTU7 201 aa11.68□□□□□ -0.54
LMO2-203ENST00000411482 CDK2AP2O75956 126 aa11.67□□□□□ -0.54
LMO2-203ENST00000411482 RPL37AP61513 92 aaKnown RBP11.67□□□□□ -0.54
LMO2-203ENST00000411482 SERP2Q8N6R1 65 aa11.67□□□□□ -0.54
LMO2-203ENST00000411482 KRTAP17-1Q9BYP8 105 aa11.67□□□□□ -0.54
LMO2-203ENST00000411482 A0A0G2JQZ4 141 aa11.66□□□□□ -0.54
LMO2-203ENST00000411482 IGKV4-1P06312 121 aa11.66□□□□□ -0.54
LMO2-203ENST00000411482 RYR1P21817 5038 aa11.66□□□□□ -0.54
LMO2-203ENST00000411482 CIRBP-AS1Q8TBR5 109 aa11.65□□□□□ -0.54
LMO2-203ENST00000411482 IGLV7-43P04211 117 aa11.64□□□□□ -0.55
LMO2-203ENST00000411482 HERC2O95714 4834 aa11.6□□□□□ -0.55
LMO2-203ENST00000411482 DSCR10P59022 87 aa11.6□□□□□ -0.55
LMO2-203ENST00000411482 SMIM20Q8N5G0 67 aa11.6□□□□□ -0.55
LMO2-203ENST00000411482 A0A087WSZ3 146 aa11.59□□□□□ -0.55
LMO2-203ENST00000411482 Q8N9L7 120 aa11.58□□□□□ -0.56
LMO2-203ENST00000411482 TRAV7A0A075B6U4 112 aa11.55□□□□□ -0.56
LMO2-203ENST00000411482 C9orf153Q5TBE3 101 aa11.53□□□□□ -0.56
LMO2-203ENST00000411482 LINC00472Q9H8W2 130 aa11.52□□□□□ -0.57
LMO2-203ENST00000411482 IGLV9-49A0A0B4J1Y8 123 aa11.51□□□□□ -0.57
LMO2-203ENST00000411482 FAT1Q14517 4588 aa11.5□□□□□ -0.57
LMO2-203ENST00000411482 KRTAP4-5Q9BYR2 181 aa11.5□□□□□ -0.57
LMO2-203ENST00000411482 K7EQZ3 153 aa11.48□□□□□ -0.57
LMO2-203ENST00000411482 SMR3BP02814 79 aaPredicted RBP11.48□□□□□ -0.57
LMO2-203ENST00000411482 Q8N1X5 172 aa11.48□□□□□ -0.57
LMO2-203ENST00000411482 ANAPC11Q9NYG5 84 aa11.45□□□□□ -0.58
LMO2-203ENST00000411482 MOBPQ13875 183 aa11.45□□□□□ -0.58
LMO2-203ENST00000411482 OCR1Q9BZK8 76 aa11.45□□□□□ -0.58
LMO2-203ENST00000411482 J3KT08 172 aa11.43□□□□□ -0.58
LMO2-203ENST00000411482 DEFB116Q30KQ4 102 aa11.41□□□□□ -0.58
LMO2-203ENST00000411482 SSBP3-AS1Q7Z2R9 100 aa11.41□□□□□ -0.58
LMO2-203ENST00000411482 Q96NJ1 140 aa11.4□□□□□ -0.58
LMO2-203ENST00000411482 SS18L2Q9UHA2 77 aa11.4□□□□□ -0.58
LMO2-203ENST00000411482 A8MWP4 228 aa11.4□□□□□ -0.59
LMO2-203ENST00000411482 CD164Q04900 197 aa11.4□□□□□ -0.59
LMO2-203ENST00000411482 PRR15Q8IV56 129 aa11.4□□□□□ -0.59
LMO2-203ENST00000411482 HCG22E2RYF7 251 aa11.39□□□□□ -0.59
LMO2-203ENST00000411482 VPS13BQ7Z7G8 4022 aa11.39□□□□□ -0.59
LMO2-203ENST00000411482 FAM229BQ4G0N7 80 aa11.38□□□□□ -0.59
LMO2-203ENST00000411482 CYSTM1Q9H1C7 97 aa11.38□□□□□ -0.59
LMO2-203ENST00000411482 KLKP1Q107X0 134 aa11.36□□□□□ -0.59
LMO2-203ENST00000411482 Q5VSD8 79 aa11.36□□□□□ -0.59
LMO2-203ENST00000411482 KRTAP10-4P60372 401 aaPredicted RBP11.35□□□□□ -0.59
LMO2-203ENST00000411482 C20orf197Q8N268 126 aa11.35□□□□□ -0.59
LMO2-203ENST00000411482 KRTAP29-1A8MX34 341 aaPredicted RBP11.35□□□□□ -0.59
LMO2-203ENST00000411482 FAM229AH3BQW9 127 aa11.33□□□□□ -0.6
LMO2-203ENST00000411482 ABCA13Q86UQ4 5058 aa11.32□□□□□ -0.6
LMO2-203ENST00000411482 HRCT1Q6UXD1 115 aa11.31□□□□□ -0.6
LMO2-203ENST00000411482 KRTAP1-4P0C5Y4 121 aa11.3□□□□□ -0.6
LMO2-203ENST00000411482 TMEM258P61165 79 aa11.29□□□□□ -0.6
LMO2-203ENST00000411482 KRTAP13-2Q52LG2 175 aa11.29□□□□□ -0.6
LMO2-203ENST00000411482 PCLOQ9Y6V0 5065 aa11.28□□□□□ -0.6
LMO2-203ENST00000411482 NDUFB1O75438 58 aa11.28□□□□□ -0.6
LMO2-203ENST00000411482 ASB16-AS1Q495Z4 193 aa11.28□□□□□ -0.6
LMO2-203ENST00000411482 A0A087X002 238 aa11.27□□□□□ -0.61
LMO2-203ENST00000411482 TMEM254Q8TBM7 123 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms