RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 RYR2Q92736 4967 aa0.48□□□□□ -2.33
RNU4-78P-201ENST00000410940 KMT2CQ8NEZ4 4911 aaKnown RBP0.48□□□□□ -2.33
RNU4-78P-201ENST00000410940 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
RNU4-78P-201ENST00000410940 SFTA3P0C7M3 94 aa0.48□□□□□ -2.33
RNU4-78P-201ENST00000410940 RYR1P21817 5038 aa0.48□□□□□ -2.33
RNU4-78P-201ENST00000410940 COL6A5A8TX70 2615 aa0.48□□□□□ -2.33
RNU4-78P-201ENST00000410940 SETD2Q9BYW2 2564 aaPredicted RBP0.48□□□□□ -2.33
RNU4-78P-201ENST00000410940 MAST4O15021 2626 aa0.47□□□□□ -2.33
RNU4-78P-201ENST00000410940 DEFB135Q30KP9 77 aa0.47□□□□□ -2.33
RNU4-78P-201ENST00000410940 ZFYVE26Q68DK2 2539 aa0.46□□□□□ -2.34
RNU4-78P-201ENST00000410940 BPTFQ12830 3046 aa0.46□□□□□ -2.34
RNU4-78P-201ENST00000410940 NAV2Q8IVL1 2488 aa0.46□□□□□ -2.34
RNU4-78P-201ENST00000410940 HIVEP3Q5T1R4 2406 aa0.46□□□□□ -2.34
RNU4-78P-201ENST00000410940 ABCA13Q86UQ4 5058 aa0.46□□□□□ -2.34
RNU4-78P-201ENST00000410940 LRRK2Q5S007 2527 aa0.46□□□□□ -2.34
RNU4-78P-201ENST00000410940 GVINP1Q7Z2Y8 2422 aa0.46□□□□□ -2.34
RNU4-78P-201ENST00000410940 CREBBPQ92793 2442 aa0.46□□□□□ -2.34
RNU4-78P-201ENST00000410940 OTOGQ6ZRI0 2925 aa0.45□□□□□ -2.34
RNU4-78P-201ENST00000410940 IAPPP10997 89 aa0.45□□□□□ -2.34
RNU4-78P-201ENST00000410940 EEA1Q15075 1411 aa0.45□□□□□ -2.34
RNU4-78P-201ENST00000410940 SONP18583 2426 aaKnown RBP0.45□□□□□ -2.34
RNU4-78P-201ENST00000410940 RYR3Q15413 4870 aa0.44□□□□□ -2.34
RNU4-78P-201ENST00000410940 LY75O60449 1722 aa0.44□□□□□ -2.34
RNU4-78P-201ENST00000410940 FLNAP21333 2647 aaKnown RBP0.44□□□□□ -2.34
RNU4-78P-201ENST00000410940 H0YGG7 62 aa0.44□□□□□ -2.34
RNU4-78P-201ENST00000410940 SPRR2DP22532 72 aa0.44□□□□□ -2.34
RNU4-78P-201ENST00000410940 CRIP1P50238 77 aa0.44□□□□□ -2.34
RNU4-78P-201ENST00000410940 NCBP2-AS2Q69YL0 99 aa0.44□□□□□ -2.34
RNU4-78P-201ENST00000410940 NMES1Q9C002 83 aa0.44□□□□□ -2.34
RNU4-78P-201ENST00000410940 ANKRD11Q6UB99 2663 aaPredicted RBP0.44□□□□□ -2.34
RNU4-78P-201ENST00000410940 DOPEY1Q5JWR5 2465 aa0.44□□□□□ -2.34
RNU4-78P-201ENST00000410940 HERC1Q15751 4861 aa0.43□□□□□ -2.34
RNU4-78P-201ENST00000410940 KIF1AQ12756 1690 aa0.43□□□□□ -2.34
RNU4-78P-201ENST00000410940 ALS2Q96Q42 1657 aa0.43□□□□□ -2.34
RNU4-78P-201ENST00000410940 CCDC168Q8NDH2 2452 aa0.43□□□□□ -2.34
RNU4-78P-201ENST00000410940 HECTD1Q9ULT8 2610 aa0.43□□□□□ -2.34
RNU4-78P-201ENST00000410940 SPTBN4Q9H254 2564 aa0.43□□□□□ -2.34
RNU4-78P-201ENST00000410940 PRM1P04553 51 aa0.43□□□□□ -2.34
RNU4-78P-201ENST00000410940 EPPK1P58107 5090 aaKnown RBP0.43□□□□□ -2.34
RNU4-78P-201ENST00000410940 ITPR3Q14573 2671 aa0.42□□□□□ -2.34
RNU4-78P-201ENST00000410940 FAT4Q6V0I7 4981 aa0.42□□□□□ -2.34
RNU4-78P-201ENST00000410940 USP9YO00507 2555 aaPredicted RBP0.42□□□□□ -2.34
RNU4-78P-201ENST00000410940 MYO18BQ8IUG5 2567 aa0.42□□□□□ -2.34
RNU4-78P-201ENST00000410940 PRXQ9BXM0 1461 aa0.41□□□□□ -2.34
RNU4-78P-201ENST00000410940 FLNBO75369 2602 aaKnown RBP0.41□□□□□ -2.34
RNU4-78P-201ENST00000410940 NSD1Q96L73 2696 aaPredicted RBP0.41□□□□□ -2.34
RNU4-78P-201ENST00000410940 FASNP49327 2511 aaKnown RBP0.41□□□□□ -2.34
RNU4-78P-201ENST00000410940 RNF213Q63HN8 5207 aa0.41□□□□□ -2.34
RNU4-78P-201ENST00000410940 LRP1Q07954 4544 aaKnown RBP0.41□□□□□ -2.34
RNU4-78P-201ENST00000410940 ACACBO00763 2458 aa0.4□□□□□ -2.35
RNU4-78P-201ENST00000410940 CLASP1Q7Z460 1538 aa0.4□□□□□ -2.35
RNU4-78P-201ENST00000410940 CHD6Q8TD26 2715 aa0.4□□□□□ -2.35
RNU4-78P-201ENST00000410940 EPG5Q9HCE0 2579 aa0.4□□□□□ -2.35
RNU4-78P-201ENST00000410940 REV3LO60673 3130 aa0.4□□□□□ -2.35
RNU4-78P-201ENST00000410940 SSPOA2VEC9 5147 aa0.4□□□□□ -2.35
RNU4-78P-201ENST00000410940 HYDINQ4G0P3 5121 aa0.4□□□□□ -2.35
RNU4-78P-201ENST00000410940 PDZD2O15018 2839 aa0.39□□□□□ -2.35
RNU4-78P-201ENST00000410940 NBEAL2Q6ZNJ1 2754 aa0.39□□□□□ -2.35
RNU4-78P-201ENST00000410940 DEFB130BP0DP73 79 aa0.39□□□□□ -2.35
RNU4-78P-201ENST00000410940 DEFB130AP0DP74 79 aa0.39□□□□□ -2.35
RNU4-78P-201ENST00000410940 KRTAP20-1Q3LI63 56 aa0.39□□□□□ -2.35
RNU4-78P-201ENST00000410940 MINOS1Q5TGZ0 78 aa0.39□□□□□ -2.35
RNU4-78P-201ENST00000410940 CPS1P31327 1500 aa0.38□□□□□ -2.35
RNU4-78P-201ENST00000410940 SYCP2Q9BX26 1530 aa0.38□□□□□ -2.35
RNU4-78P-201ENST00000410940 PREX2Q70Z35 1606 aa0.38□□□□□ -2.35
RNU4-78P-201ENST00000410940 EP300Q09472 2414 aaPredicted RBP0.38□□□□□ -2.35
RNU4-78P-201ENST00000410940 TNXBP22105 4242 aa0.38□□□□□ -2.35
RNU4-78P-201ENST00000410940 GLI2P10070 1586 aa0.38□□□□□ -2.35
RNU4-78P-201ENST00000410940 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
RNU4-78P-201ENST00000410940 SPRR2BP35325 72 aa0.38□□□□□ -2.35
RNU4-78P-201ENST00000410940 WDFY4Q6ZS81 3184 aa0.38□□□□□ -2.35
RNU4-78P-201ENST00000410940 GCN1Q92616 2671 aaKnown RBP0.38□□□□□ -2.35
RNU4-78P-201ENST00000410940 IGSF10Q6WRI0 2623 aa0.37□□□□□ -2.35
RNU4-78P-201ENST00000410940 ITSN2Q9NZM3 1697 aa0.37□□□□□ -2.35
RNU4-78P-201ENST00000410940 TNRC18O15417 2968 aaPredicted RBP0.37□□□□□ -2.35
RNU4-78P-201ENST00000410940 BIRC6Q9NR09 4857 aa0.37□□□□□ -2.35
RNU4-78P-201ENST00000410940 IGF2RP11717 2491 aa0.37□□□□□ -2.35
RNU4-78P-201ENST00000410940 AKAP13Q12802 2813 aa0.37□□□□□ -2.35
RNU4-78P-201ENST00000410940 BSNQ9UPA5 3926 aa0.36□□□□□ -2.35
RNU4-78P-201ENST00000410940 SPTA1P02549 2419 aa0.36□□□□□ -2.35
RNU4-78P-201ENST00000410940 MYO9AB2RTY4 2548 aa0.36□□□□□ -2.35
RNU4-78P-201ENST00000410940 RIF1Q5UIP0 2472 aaKnown RBP0.36□□□□□ -2.35
RNU4-78P-201ENST00000410940 STAB2Q8WWQ8 2551 aa0.35□□□□□ -2.35
RNU4-78P-201ENST00000410940 CSPG4Q6UVK1 2322 aa0.35□□□□□ -2.35
RNU4-78P-201ENST00000410940 C6orf48Q9UBA6 75 aa0.35□□□□□ -2.35
RNU4-78P-201ENST00000410940 HMCN2Q8NDA2 5059 aa0.35□□□□□ -2.35
RNU4-78P-201ENST00000410940 ACANP16112 2415 aa0.35□□□□□ -2.35
RNU4-78P-201ENST00000410940 HIVEP1P15822 2718 aa0.35□□□□□ -2.35
RNU4-78P-201ENST00000410940 FLNCQ14315 2725 aa0.35□□□□□ -2.35
RNU4-78P-201ENST00000410940 ADCY10Q96PN6 1610 aa0.35□□□□□ -2.35
RNU4-78P-201ENST00000410940 A0A0C4DFX4 3053 aa0.34□□□□□ -2.35
RNU4-78P-201ENST00000410940 M0R1W7 72 aa0.34□□□□□ -2.36
RNU4-78P-201ENST00000410940 MAP1BP46821 2468 aaKnown RBP0.34□□□□□ -2.36
RNU4-78P-201ENST00000410940 PRLHP81277 87 aa0.34□□□□□ -2.36
RNU4-78P-201ENST00000410940 SRCAPQ6ZRS2 3230 aa0.34□□□□□ -2.36
RNU4-78P-201ENST00000410940 CEP295Q9C0D2 2601 aa0.34□□□□□ -2.36
RNU4-78P-201ENST00000410940 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.36
RNU4-78P-201ENST00000410940 ATRQ13535 2644 aa0.34□□□□□ -2.36
RNU4-78P-201ENST00000410940 HUWE1Q7Z6Z7 4374 aaKnown RBP0.33□□□□□ -2.36
RNU4-78P-201ENST00000410940 UGGT1Q9NYU2 1555 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms