RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 FAM218AQ96MZ4 157 aa13.62□□□□□ -0.23
UBE2E3-202ENST00000410062 TRIAP1O43715 76 aa13.62□□□□□ -0.23
UBE2E3-202ENST00000410062 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.62□□□□□ -0.23
UBE2E3-202ENST00000410062 HRCT1Q6UXD1 115 aa13.58□□□□□ -0.23
UBE2E3-202ENST00000410062 A0A1B0GV90 55 aa13.57□□□□□ -0.24
UBE2E3-202ENST00000410062 RPS29P62273 56 aaKnown RBP13.57□□□□□ -0.24
UBE2E3-202ENST00000410062 SNCGO76070 127 aa13.56□□□□□ -0.24
UBE2E3-202ENST00000410062 PSMB2P49721 201 aa13.56□□□□□ -0.24
UBE2E3-202ENST00000410062 A0A0G2JQZ4 141 aa13.54□□□□□ -0.24
UBE2E3-202ENST00000410062 F8WEM9 126 aa13.54□□□□□ -0.24
UBE2E3-202ENST00000410062 CLEC2BQ92478 149 aa13.53□□□□□ -0.24
UBE2E3-202ENST00000410062 PPDPFLQ8WWR9 84 aa13.51□□□□□ -0.25
UBE2E3-202ENST00000410062 IGLV7-46A0A075B6I9 117 aa13.5□□□□□ -0.25
UBE2E3-202ENST00000410062 M0R143 59 aa13.5□□□□□ -0.25
UBE2E3-202ENST00000410062 A0A1B0GX51 115 aa13.49□□□□□ -0.25
UBE2E3-202ENST00000410062 SNHG12Q9BXW3 62 aa13.49□□□□□ -0.25
UBE2E3-202ENST00000410062 COX6CP09669 75 aa13.49□□□□□ -0.25
UBE2E3-202ENST00000410062 OCIAD2Q56VL3 154 aa13.49□□□□□ -0.25
UBE2E3-202ENST00000410062 PCP4P48539 62 aa13.48□□□□□ -0.25
UBE2E3-202ENST00000410062 CD164Q04900 197 aa13.47□□□□□ -0.25
UBE2E3-202ENST00000410062 FP248Q71RG6 208 aaPredicted RBP13.45□□□□□ -0.26
UBE2E3-202ENST00000410062 IGLV8-61A0A075B6I0 122 aa13.44□□□□□ -0.26
UBE2E3-202ENST00000410062 LIMD2Q9BT23 127 aa13.44□□□□□ -0.26
UBE2E3-202ENST00000410062 H3BUT2 72 aa13.41□□□□□ -0.26
UBE2E3-202ENST00000410062 DNAL4O96015 105 aa13.41□□□□□ -0.26
UBE2E3-202ENST00000410062 SCGB1C2P0DMR2 95 aa13.41□□□□□ -0.26
UBE2E3-202ENST00000410062 Q6JHZ5 121 aa13.41□□□□□ -0.26
UBE2E3-202ENST00000410062 IGFL1Q6UW32 110 aa13.41□□□□□ -0.26
UBE2E3-202ENST00000410062 TPRXLQ17RH7 258 aa13.4□□□□□ -0.26
UBE2E3-202ENST00000410062 FABP2P12104 132 aa13.39□□□□□ -0.27
UBE2E3-202ENST00000410062 NDUFV3P56181 108 aaKnown RBP13.38□□□□□ -0.27
UBE2E3-202ENST00000410062 GHRHP01286 108 aa13.37□□□□□ -0.27
UBE2E3-202ENST00000410062 BATFQ16520 125 aa13.37□□□□□ -0.27
UBE2E3-202ENST00000410062 NAA38Q9BRA0 125 aaKnown RBP13.36□□□□□ -0.27
UBE2E3-202ENST00000410062 ORMDL1Q9P0S3 153 aa13.36□□□□□ -0.27
UBE2E3-202ENST00000410062 CDIP1Q9H305 208 aa13.34□□□□□ -0.27
UBE2E3-202ENST00000410062 Q5XG85 94 aa13.33□□□□□ -0.28
UBE2E3-202ENST00000410062 LST1O00453 97 aa13.32□□□□□ -0.28
UBE2E3-202ENST00000410062 KRTAP13-3Q3SY46 172 aa13.32□□□□□ -0.28
UBE2E3-202ENST00000410062 H3BMG7 143 aa13.31□□□□□ -0.28
UBE2E3-202ENST00000410062 TRACP01848 142 aa13.31□□□□□ -0.28
UBE2E3-202ENST00000410062 SVIPQ8NHG7 77 aa13.31□□□□□ -0.28
UBE2E3-202ENST00000410062 RNF213Q63HN8 5207 aa13.29□□□□□ -0.28
UBE2E3-202ENST00000410062 TRBV7-7A0A0K0K1E9 115 aa13.28□□□□□ -0.28
UBE2E3-202ENST00000410062 H3BQ85 93 aa13.28□□□□□ -0.28
UBE2E3-202ENST00000410062 TMEM256-PLSCR3K7ERE1 68 aa13.27□□□□□ -0.29
UBE2E3-202ENST00000410062 TCL1BO95988 128 aa13.26□□□□□ -0.29
UBE2E3-202ENST00000410062 C1orf195Q5TG92 126 aa13.26□□□□□ -0.29
UBE2E3-202ENST00000410062 A0A1B0GV72 72 aa13.25□□□□□ -0.29
UBE2E3-202ENST00000410062 C21orf62-AS1Q17RA5 79 aa13.25□□□□□ -0.29
UBE2E3-202ENST00000410062 ATXN8Q156A1 80 aa13.2□□□□□ -0.3
UBE2E3-202ENST00000410062 UBE2V1Q13404 147 aa13.2□□□□□ -0.3
UBE2E3-202ENST00000410062 Q6Q795 121 aa13.19□□□□□ -0.3
UBE2E3-202ENST00000410062 TEN1Q86WV5 123 aa13.19□□□□□ -0.3
UBE2E3-202ENST00000410062 BAALC-AS2P0C853 105 aa13.17□□□□□ -0.3
UBE2E3-202ENST00000410062 ASB16-AS1Q495Z4 193 aa13.16□□□□□ -0.3
UBE2E3-202ENST00000410062 ANKRD29Q8N6D5 301 aa13.16□□□□□ -0.3
UBE2E3-202ENST00000410062 TAX1BP3O14907 124 aa13.15□□□□□ -0.3
UBE2E3-202ENST00000410062 A0A1W2PNM2 257 aa13.15□□□□□ -0.3
UBE2E3-202ENST00000410062 LYRM7Q5U5X0 104 aa13.15□□□□□ -0.3
UBE2E3-202ENST00000410062 C9orf118A6NHY6 69 aa13.14□□□□□ -0.31
UBE2E3-202ENST00000410062 C9orf92A6NGG3 77 aa13.13□□□□□ -0.31
UBE2E3-202ENST00000410062 A0A087WSZ3 146 aa13.11□□□□□ -0.31
UBE2E3-202ENST00000410062 MUC17Q685J3 4493 aa13.11□□□□□ -0.31
UBE2E3-202ENST00000410062 COL5A1-AS1Q5SY13 56 aa13.11□□□□□ -0.31
UBE2E3-202ENST00000410062 TRBV20-1A0A075B6N2 111 aa13.09□□□□□ -0.31
UBE2E3-202ENST00000410062 XP32Q5T750 250 aa13.09□□□□□ -0.31
UBE2E3-202ENST00000410062 SS18L2Q9UHA2 77 aa13.09□□□□□ -0.31
UBE2E3-202ENST00000410062 MUC2Q02817 5179 aa13.09□□□□□ -0.31
UBE2E3-202ENST00000410062 RBM3P98179 157 aaKnown RBP13.07□□□□□ -0.32
UBE2E3-202ENST00000410062 A0A1W2PPM0 123 aa13.07□□□□□ -0.32
UBE2E3-202ENST00000410062 TRBV7-4A0A0J9YYF1 115 aa13.05□□□□□ -0.32
UBE2E3-202ENST00000410062 CCKP06307 115 aa13.05□□□□□ -0.32
UBE2E3-202ENST00000410062 C9JAW5 83 aa13.03□□□□□ -0.32
UBE2E3-202ENST00000410062 DSCR8Q96T75 97 aa13.03□□□□□ -0.32
UBE2E3-202ENST00000410062 VPS25Q9BRG1 176 aa13□□□□□ -0.33
UBE2E3-202ENST00000410062 Q96NJ1 140 aa12.98□□□□□ -0.33
UBE2E3-202ENST00000410062 SEC61BP60468 96 aaKnown RBP12.97□□□□□ -0.33
UBE2E3-202ENST00000410062 JMJD7-PLA2G4BH0Y9G9 81 aa12.95□□□□□ -0.34
UBE2E3-202ENST00000410062 MTURNQ8N3F0 131 aa12.94□□□□□ -0.34
UBE2E3-202ENST00000410062 SPCS1Q9Y6A9 102 aa12.92□□□□□ -0.34
UBE2E3-202ENST00000410062 Q6ZQT0 140 aa12.89□□□□□ -0.35
UBE2E3-202ENST00000410062 C14orf132Q9NPU4 83 aa12.89□□□□□ -0.35
UBE2E3-202ENST00000410062 H3BT86 120 aa12.88□□□□□ -0.35
UBE2E3-202ENST00000410062 OBSCN-AS1Q96MR7 158 aa12.88□□□□□ -0.35
UBE2E3-202ENST00000410062 LOC110117498A0A087WWA1 95 aa12.87□□□□□ -0.35
UBE2E3-202ENST00000410062 DEFB116Q30KQ4 102 aa12.86□□□□□ -0.35
UBE2E3-202ENST00000410062 SIGMAR1Q99720 223 aa12.86□□□□□ -0.35
UBE2E3-202ENST00000410062 LINC00472Q9H8W2 130 aa12.86□□□□□ -0.35
UBE2E3-202ENST00000410062 IGKV4-1P06312 121 aa12.85□□□□□ -0.35
UBE2E3-202ENST00000410062 KRTAP4-1Q9BYQ7 146 aa12.85□□□□□ -0.35
UBE2E3-202ENST00000410062 K7ERU9 68 aa12.84□□□□□ -0.35
UBE2E3-202ENST00000410062 PCOTHQ58A44 107 aa12.84□□□□□ -0.35
UBE2E3-202ENST00000410062 PDE6GP18545 87 aa12.82□□□□□ -0.36
UBE2E3-202ENST00000410062 RPL37P61927 97 aaKnown RBP12.82□□□□□ -0.36
UBE2E3-202ENST00000410062 K7EP34 96 aa12.77□□□□□ -0.37
UBE2E3-202ENST00000410062 DSCR10P59022 87 aa12.76□□□□□ -0.37
UBE2E3-202ENST00000410062 A0A0U1RQV1 116 aa12.75□□□□□ -0.37
UBE2E3-202ENST00000410062 SMCPP49901 116 aaPredicted RBP12.75□□□□□ -0.37
UBE2E3-202ENST00000410062 A0A1B0GW54 56 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms