RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
LSM5-206ENST00000409987 LOC285095A0A1B0GVY8 99 aa1.91□□□□□ -2.1
LSM5-206ENST00000409987 NDUFC1O43677 76 aa1.91□□□□□ -2.1
LSM5-206ENST00000409987 SFT2D2O95562 160 aa1.91□□□□□ -2.1
LSM5-206ENST00000409987 UBE2D3P61077 147 aa1.91□□□□□ -2.1
LSM5-206ENST00000409987 UBE2D2P62837 147 aa1.91□□□□□ -2.1
LSM5-206ENST00000409987 Q5VV11 94 aa1.91□□□□□ -2.1
LSM5-206ENST00000409987 NPVFQ9HCQ7 196 aa1.91□□□□□ -2.1
LSM5-206ENST00000409987 TRAV22A0A0B4J277 110 aa1.9□□□□□ -2.11
LSM5-206ENST00000409987 SPAG11BQ08648 103 aa1.9□□□□□ -2.11
LSM5-206ENST00000409987 SPAG11AQ6PDA7 123 aa1.9□□□□□ -2.11
LSM5-206ENST00000409987 PRO1854Q9UHT4 67 aa1.9□□□□□ -2.11
LSM5-206ENST00000409987 R4GMQ9 66 aa1.9□□□□□ -2.11
LSM5-206ENST00000409987 FSIP2Q5CZC0 6907 aa1.89□□□□□ -2.11
LSM5-206ENST00000409987 TRBV7-7A0A0K0K1E9 115 aa1.89□□□□□ -2.11
LSM5-206ENST00000409987 GYPAP02724 150 aa1.89□□□□□ -2.11
LSM5-206ENST00000409987 CCL18P55774 89 aa1.89□□□□□ -2.11
LSM5-206ENST00000409987 DEFB108BQ8NET1 73 aa1.89□□□□□ -2.11
LSM5-206ENST00000409987 WFDC6Q9BQY6 131 aa1.89□□□□□ -2.11
LSM5-206ENST00000409987 CDC42SE2Q9NRR3 84 aa1.89□□□□□ -2.11
LSM5-206ENST00000409987 DOCK11Q5JSL3 2073 aa1.88□□□□□ -2.11
LSM5-206ENST00000409987 LYNX1G3V0Z9 82 aa1.88□□□□□ -2.11
LSM5-206ENST00000409987 HMGN4O00479 90 aa1.88□□□□□ -2.11
LSM5-206ENST00000409987 COX6CP09669 75 aa1.88□□□□□ -2.11
LSM5-206ENST00000409987 LYNX1P0DP58 116 aa1.88□□□□□ -2.11
LSM5-206ENST00000409987 Q8N6K4 173 aa1.88□□□□□ -2.11
LSM5-206ENST00000409987 SERP2Q8N6R1 65 aa1.88□□□□□ -2.11
LSM5-206ENST00000409987 Q96NJ1 140 aa1.88□□□□□ -2.11
LSM5-206ENST00000409987 PRO1933Q9H354 126 aa1.88□□□□□ -2.11
LSM5-206ENST00000409987 FLG2Q5D862 2391 aaPredicted RBP1.88□□□□□ -2.11
LSM5-206ENST00000409987 UQCRHLA0A096LP55 91 aa1.87□□□□□ -2.11
LSM5-206ENST00000409987 FAUP35544 74 aaKnown RBP1.87□□□□□ -2.11
LSM5-206ENST00000409987 DEFB112Q30KQ8 113 aa1.87□□□□□ -2.11
LSM5-206ENST00000409987 NCBP2-AS2Q69YL0 99 aa1.87□□□□□ -2.11
LSM5-206ENST00000409987 TRGV9Q99603 122 aa1.87□□□□□ -2.11
LSM5-206ENST00000409987 V9GYH0 126 aa1.87□□□□□ -2.11
LSM5-206ENST00000409987 LRP1Q07954 4544 aaKnown RBP1.87□□□□□ -2.11
LSM5-206ENST00000409987 PYY3Q5JQD4 70 aa1.86□□□□□ -2.11
LSM5-206ENST00000409987 TMEM170BQ5T4T1 132 aa1.86□□□□□ -2.11
LSM5-206ENST00000409987 BAGE3Q86Y29 109 aa1.86□□□□□ -2.11
LSM5-206ENST00000409987 FAT3Q8TDW7 4589 aa1.86□□□□□ -2.11
LSM5-206ENST00000409987 CCL22O00626 93 aa1.85□□□□□ -2.11
LSM5-206ENST00000409987 LY6G6CO95867 125 aa1.85□□□□□ -2.11
LSM5-206ENST00000409987 APOC3P02656 99 aa1.85□□□□□ -2.11
LSM5-206ENST00000409987 TRAPPC2P0DI81 140 aa1.85□□□□□ -2.11
LSM5-206ENST00000409987 TRAPPC2BP0DI82 140 aa1.85□□□□□ -2.11
LSM5-206ENST00000409987 SPINK13Q1W4C9 94 aa1.85□□□□□ -2.11
LSM5-206ENST00000409987 CACFD1Q9UGQ2 172 aa1.85□□□□□ -2.11
LSM5-206ENST00000409987 PKHD1L1Q86WI1 4243 aa1.85□□□□□ -2.11
LSM5-206ENST00000409987 TRGV1A0A0A0MS02 117 aa1.84□□□□□ -2.11
LSM5-206ENST00000409987 TMEM14DPA8MWL7 114 aa1.84□□□□□ -2.11
LSM5-206ENST00000409987 M0R135 149 aa1.84□□□□□ -2.11
LSM5-206ENST00000409987 PLAC4Q8WY50 150 aa1.84□□□□□ -2.11
LSM5-206ENST00000409987 AMELXQ99217 191 aa1.84□□□□□ -2.11
LSM5-206ENST00000409987 IGLC7A0M8Q6 106 aa1.83□□□□□ -2.12
LSM5-206ENST00000409987 F8VRH5 84 aa1.83□□□□□ -2.12
LSM5-206ENST00000409987 ANGP03950 147 aaKnown RBP1.83□□□□□ -2.12
LSM5-206ENST00000409987 SFTA2Q6UW10 78 aa1.83□□□□□ -2.12
LSM5-206ENST00000409987 A0A0G2JND7 137 aa1.82□□□□□ -2.12
LSM5-206ENST00000409987 SYS1-DBNDD2H3BUS1 97 aa1.82□□□□□ -2.12
LSM5-206ENST00000409987 K7EP34 96 aa1.82□□□□□ -2.12
LSM5-206ENST00000409987 ACYP2P14621 99 aa1.82□□□□□ -2.12
LSM5-206ENST00000409987 Q6ZSA8 131 aa1.82□□□□□ -2.12
LSM5-206ENST00000409987 VMO1Q7Z5L0 202 aa1.82□□□□□ -2.12
LSM5-206ENST00000409987 CTXND1A0A1B0GTU2 59 aa1.81□□□□□ -2.12
LSM5-206ENST00000409987 H7BZZ5 65 aa1.81□□□□□ -2.12
LSM5-206ENST00000409987 C20orf78Q9BR46 151 aa1.81□□□□□ -2.12
LSM5-206ENST00000409987 NXT2Q9NPJ8 142 aaKnown RBP1.81□□□□□ -2.12
LSM5-206ENST00000409987 TNXBP22105 4242 aa1.81□□□□□ -2.12
LSM5-206ENST00000409987 TRAV1-2A0A0B4J238 106 aa1.8□□□□□ -2.12
LSM5-206ENST00000409987 UQCR11O14957 56 aa1.8□□□□□ -2.12
LSM5-206ENST00000409987 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.8□□□□□ -2.12
LSM5-206ENST00000409987 BAGE2Q86Y30 109 aa1.8□□□□□ -2.12
LSM5-206ENST00000409987 LINC01558Q9Y6Z2 57 aa1.8□□□□□ -2.12
LSM5-206ENST00000409987 ARL2-SNX15V9GYD0 113 aa1.8□□□□□ -2.12
LSM5-206ENST00000409987 F2Z2F3 143 aa1.79□□□□□ -2.12
LSM5-206ENST00000409987 MRPL33O75394 65 aaKnown RBP1.79□□□□□ -2.12
LSM5-206ENST00000409987 RPL37P61927 97 aaKnown RBP1.79□□□□□ -2.12
LSM5-206ENST00000409987 SORL1Q92673 2214 aa1.79□□□□□ -2.12
LSM5-206ENST00000409987 TRBV25-1A0A075B6N4 114 aa1.77□□□□□ -2.13
LSM5-206ENST00000409987 CYB5AP00167 134 aa1.77□□□□□ -2.13
LSM5-206ENST00000409987 SAA2P0DJI9 122 aaPredicted RBP1.77□□□□□ -2.13
LSM5-206ENST00000409987 ZNF137PP52743 207 aa1.77□□□□□ -2.13
LSM5-206ENST00000409987 PMCHL1Q16048 86 aa1.77□□□□□ -2.13
LSM5-206ENST00000409987 FAM223AQ8IWN6 122 aa1.77□□□□□ -2.13
LSM5-206ENST00000409987 SMIM11BQ8TCY0 68 aa1.77□□□□□ -2.13
LSM5-206ENST00000409987 SMIM4Q8WVI0 70 aa1.77□□□□□ -2.13
LSM5-206ENST00000409987 S100A16Q96FQ6 103 aaKnown RBP1.77□□□□□ -2.13
LSM5-206ENST00000409987 DNAH8Q96JB1 4490 aa1.76□□□□□ -2.13
LSM5-206ENST00000409987 GVQW2A0A096LPI5 108 aaPredicted RBP1.76□□□□□ -2.13
LSM5-206ENST00000409987 NMBP08949 121 aa1.76□□□□□ -2.13
LSM5-206ENST00000409987 PEA15Q15121 130 aa1.76□□□□□ -2.13
LSM5-206ENST00000409987 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
LSM5-206ENST00000409987 H3BUX3 64 aa1.75□□□□□ -2.13
LSM5-206ENST00000409987 COX17Q14061 63 aa1.75□□□□□ -2.13
LSM5-206ENST00000409987 CFAP126Q5VTH2 177 aa1.75□□□□□ -2.13
LSM5-206ENST00000409987 FAM223BA6NKX1 122 aa1.74□□□□□ -2.13
LSM5-206ENST00000409987 Q6ZRX8 168 aa1.74□□□□□ -2.13
LSM5-206ENST00000409987 RABAC1Q9UI14 185 aa1.74□□□□□ -2.13
LSM5-206ENST00000409987 TNCP24821 2201 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms