RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 IGFL1Q6UW32 110 aa7.11□□□□□ -1.27
SNX13-202ENST00000409604 Q6ZQT0 140 aa7.1□□□□□ -1.27
SNX13-202ENST00000409604 KRTAP21-3Q3LHN1 58 aa7.1□□□□□ -1.27
SNX13-202ENST00000409604 TRBV7-6A0A0J9YX20 115 aa7.09□□□□□ -1.27
SNX13-202ENST00000409604 C9orf92A6NGG3 77 aa7.09□□□□□ -1.27
SNX13-202ENST00000409604 CASC2Q6XLA1 102 aa7.09□□□□□ -1.27
SNX13-202ENST00000409604 MEGF8Q7Z7M0 2845 aa7.08□□□□□ -1.28
SNX13-202ENST00000409604 PCOTHQ58A44 107 aa7.08□□□□□ -1.28
SNX13-202ENST00000409604 CDIP1Q9H305 208 aa7.08□□□□□ -1.28
SNX13-202ENST00000409604 LINC00208Q96KT6 92 aa7.07□□□□□ -1.28
SNX13-202ENST00000409604 SPRR4Q96PI1 79 aa7.06□□□□□ -1.28
SNX13-202ENST00000409604 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
SNX13-202ENST00000409604 HCG22E2RYF7 251 aa7.05□□□□□ -1.28
SNX13-202ENST00000409604 IGKV2-30P06310 120 aa7.05□□□□□ -1.28
SNX13-202ENST00000409604 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
SNX13-202ENST00000409604 KRTAP11-1Q8IUC1 163 aa7.04□□□□□ -1.28
SNX13-202ENST00000409604 Q6ZRN7 208 aaPredicted RBP7.04□□□□□ -1.28
SNX13-202ENST00000409604 ATP5EP2Q5VTU8 51 aa7.03□□□□□ -1.28
SNX13-202ENST00000409604 LINC00304Q8N9R0 145 aa7.03□□□□□ -1.28
SNX13-202ENST00000409604 CSMD3Q7Z407 3707 aa7.03□□□□□ -1.28
SNX13-202ENST00000409604 LIMD2Q9BT23 127 aa7.03□□□□□ -1.28
SNX13-202ENST00000409604 CHKB-CPT1BH3BT56 60 aa7.03□□□□□ -1.28
SNX13-202ENST00000409604 SMIM29Q86T20 159 aa7.03□□□□□ -1.28
SNX13-202ENST00000409604 FAM240AA0A1B0GVK7 77 aa7.02□□□□□ -1.29
SNX13-202ENST00000409604 A0A1W2PNM2 257 aa7.02□□□□□ -1.29
SNX13-202ENST00000409604 K7EQZ3 153 aa7.02□□□□□ -1.29
SNX13-202ENST00000409604 Q96NJ1 140 aa7.01□□□□□ -1.29
SNX13-202ENST00000409604 PLAC8Q9NZF1 115 aa7.01□□□□□ -1.29
SNX13-202ENST00000409604 CCDC179H3BU77 68 aa7.01□□□□□ -1.29
SNX13-202ENST00000409604 DNHD1Q96M86 4753 aa7□□□□□ -1.29
SNX13-202ENST00000409604 DSCR10P59022 87 aa7□□□□□ -1.29
SNX13-202ENST00000409604 OBSCN-AS1Q96MR7 158 aa7□□□□□ -1.29
SNX13-202ENST00000409604 SPINK1P00995 79 aa6.99□□□□□ -1.29
SNX13-202ENST00000409604 Q5VSD8 79 aa6.99□□□□□ -1.29
SNX13-202ENST00000409604 Q6Q795 121 aa6.99□□□□□ -1.29
SNX13-202ENST00000409604 IGLV5-37A0A075B6J1 123 aa6.98□□□□□ -1.29
SNX13-202ENST00000409604 TRBV7-4A0A0J9YYF1 115 aa6.96□□□□□ -1.29
SNX13-202ENST00000409604 hDV103S1A0JD37 113 aa6.96□□□□□ -1.29
SNX13-202ENST00000409604 KRTAP7-1Q8IUC3 87 aa6.96□□□□□ -1.3
SNX13-202ENST00000409604 LOC110117498A0A087WWA1 95 aa6.95□□□□□ -1.3
SNX13-202ENST00000409604 C5orf47Q569G3 176 aa6.95□□□□□ -1.3
SNX13-202ENST00000409604 SERP2Q8N6R1 65 aa6.95□□□□□ -1.3
SNX13-202ENST00000409604 LINC00313P59037 77 aa6.95□□□□□ -1.3
SNX13-202ENST00000409604 SSBP3-AS1Q7Z2R9 100 aa6.93□□□□□ -1.3
SNX13-202ENST00000409604 H0Y9P7 68 aa6.93□□□□□ -1.3
SNX13-202ENST00000409604 J3KT08 172 aa6.93□□□□□ -1.3
SNX13-202ENST00000409604 IMUPQ9GZP8 106 aa6.92□□□□□ -1.3
SNX13-202ENST00000409604 UQCRQO14949 82 aa6.91□□□□□ -1.3
SNX13-202ENST00000409604 TRBV7-7A0A0K0K1E9 115 aa6.91□□□□□ -1.3
SNX13-202ENST00000409604 SMIM20Q8N5G0 67 aa6.91□□□□□ -1.3
SNX13-202ENST00000409604 FAM236DA0A1B0GTK5 79 aa6.9□□□□□ -1.3
SNX13-202ENST00000409604 FAM236CP0DP71 79 aa6.9□□□□□ -1.3
SNX13-202ENST00000409604 SPRR1AP35321 89 aa6.9□□□□□ -1.3
SNX13-202ENST00000409604 MPLKIPQ8TAP9 179 aa6.9□□□□□ -1.31
SNX13-202ENST00000409604 A0A087X002 238 aa6.89□□□□□ -1.31
SNX13-202ENST00000409604 COX7CP15954 63 aa6.88□□□□□ -1.31
SNX13-202ENST00000409604 CXCL6P80162 114 aa6.88□□□□□ -1.31
SNX13-202ENST00000409604 C1orf64Q8NEQ6 169 aa6.87□□□□□ -1.31
SNX13-202ENST00000409604 IGLV5-48A0A075B6I7 105 aa6.86□□□□□ -1.31
SNX13-202ENST00000409604 TRAV7A0A075B6U4 112 aa6.86□□□□□ -1.31
SNX13-202ENST00000409604 TMEM254Q8TBM7 123 aa6.86□□□□□ -1.31
SNX13-202ENST00000409604 A8MWP4 228 aa6.85□□□□□ -1.31
SNX13-202ENST00000409604 PRR15Q8IV56 129 aa6.82□□□□□ -1.32
SNX13-202ENST00000409604 ATP11AUNQ6ZP68 121 aa6.82□□□□□ -1.32
SNX13-202ENST00000409604 C8orf17Q9NRJ1 99 aa6.82□□□□□ -1.32
SNX13-202ENST00000409604 KRTAP4-16G5E9R7 235 aaPredicted RBP6.81□□□□□ -1.32
SNX13-202ENST00000409604 A0A1B0GVX0 72 aa6.8□□□□□ -1.32
SNX13-202ENST00000409604 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
SNX13-202ENST00000409604 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
SNX13-202ENST00000409604 IGLV7-46A0A075B6I9 117 aa6.79□□□□□ -1.32
SNX13-202ENST00000409604 TRAV22A0A0B4J277 110 aa6.77□□□□□ -1.33
SNX13-202ENST00000409604 TMEM258P61165 79 aa6.75□□□□□ -1.33
SNX13-202ENST00000409604 COX6B2Q6YFQ2 88 aa6.74□□□□□ -1.33
SNX13-202ENST00000409604 C7orf65Q6ZTY9 151 aa6.74□□□□□ -1.33
SNX13-202ENST00000409604 A0A1B0GW54 56 aa6.73□□□□□ -1.33
SNX13-202ENST00000409604 SEC61GP60059 68 aa6.7□□□□□ -1.34
SNX13-202ENST00000409604 FAM229BQ4G0N7 80 aa6.69□□□□□ -1.34
SNX13-202ENST00000409604 Q8N1X5 172 aa6.69□□□□□ -1.34
SNX13-202ENST00000409604 HUWE1Q7Z6Z7 4374 aaKnown RBP6.67□□□□□ -1.34
SNX13-202ENST00000409604 SPRR1BP22528 89 aa6.67□□□□□ -1.34
SNX13-202ENST00000409604 TP53AIP1Q9HCN2 124 aa6.67□□□□□ -1.34
SNX13-202ENST00000409604 C1orf195Q5TG92 126 aa6.67□□□□□ -1.34
SNX13-202ENST00000409604 IGLV8-61A0A075B6I0 122 aa6.67□□□□□ -1.34
SNX13-202ENST00000409604 C8orf87E5RJ46 101 aa6.67□□□□□ -1.34
SNX13-202ENST00000409604 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
SNX13-202ENST00000409604 NOTCH2NLQ7Z3S9 236 aa6.65□□□□□ -1.35
SNX13-202ENST00000409604 NDUFC1O43677 76 aa6.65□□□□□ -1.35
SNX13-202ENST00000409604 PSPHP1O15172 72 aa6.64□□□□□ -1.35
SNX13-202ENST00000409604 LINC00472Q9H8W2 130 aa6.63□□□□□ -1.35
SNX13-202ENST00000409604 C4orf26Q17RF5 130 aa6.63□□□□□ -1.35
SNX13-202ENST00000409604 SPTSSBQ8NFR3 76 aa6.62□□□□□ -1.35
SNX13-202ENST00000409604 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
SNX13-202ENST00000409604 SERP1Q9Y6X1 66 aa6.6□□□□□ -1.35
SNX13-202ENST00000409604 Q6ZSA8 131 aa6.59□□□□□ -1.35
SNX13-202ENST00000409604 CD164Q04900 197 aa6.59□□□□□ -1.35
SNX13-202ENST00000409604 BRK1Q8WUW1 75 aa6.59□□□□□ -1.35
SNX13-202ENST00000409604 LINC00483Q53H64 154 aa6.59□□□□□ -1.36
SNX13-202ENST00000409604 MMP24-AS1A0A0U1RRL7 71 aa6.58□□□□□ -1.36
SNX13-202ENST00000409604 Q8N9P0 234 aaPredicted RBP6.57□□□□□ -1.36
SNX13-202ENST00000409604 PRR15LQ9BU68 103 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms