RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 LINC00472Q9H8W2 130 aa15.11■□□□□ 0.01
SPIRE1-202ENST00000409402 SPINK7P58062 85 aa15.08■□□□□ 0
SPIRE1-202ENST00000409402 Q5W150 140 aa15.07■□□□□ 0
SPIRE1-202ENST00000409402 TEP1Q99973 2627 aaKnown RBP15.04■□□□□ -0
SPIRE1-202ENST00000409402 KTN1-AS1Q86SY8 53 aa15.03■□□□□ -0
SPIRE1-202ENST00000409402 Q1T7F1 81 aa15.03■□□□□ -0
SPIRE1-202ENST00000409402 ZNF292O60281 2723 aa15.01□□□□□ -0.01
SPIRE1-202ENST00000409402 TEX15Q9BXT5 2789 aa15□□□□□ -0.01
SPIRE1-202ENST00000409402 Q6ZR54 194 aa14.99□□□□□ -0.01
SPIRE1-202ENST00000409402 LINC00483Q53H64 154 aa14.97□□□□□ -0.01
SPIRE1-202ENST00000409402 LCA10Q71F78 164 aa14.97□□□□□ -0.01
SPIRE1-202ENST00000409402 SETXQ7Z333 2677 aaKnown RBP14.94□□□□□ -0.02
SPIRE1-202ENST00000409402 DMAC1Q96GE9 116 aa14.93□□□□□ -0.02
SPIRE1-202ENST00000409402 FP248Q71RG6 208 aaPredicted RBP14.93□□□□□ -0.02
SPIRE1-202ENST00000409402 OXTP01178 125 aa14.9□□□□□ -0.02
SPIRE1-202ENST00000409402 HTTP42858 3142 aa14.9□□□□□ -0.02
SPIRE1-202ENST00000409402 COL6A5A8TX70 2615 aa14.89□□□□□ -0.03
SPIRE1-202ENST00000409402 R4GN34 69 aa14.88□□□□□ -0.03
SPIRE1-202ENST00000409402 PANO1I0J062 215 aa14.86□□□□□ -0.03
SPIRE1-202ENST00000409402 Q75L30 129 aa14.86□□□□□ -0.03
SPIRE1-202ENST00000409402 MGAQ8IWI9 3026 aa14.85□□□□□ -0.03
SPIRE1-202ENST00000409402 LUZP6Q538Z0 58 aa14.85□□□□□ -0.03
SPIRE1-202ENST00000409402 LINC01558Q9Y6Z2 57 aa14.85□□□□□ -0.03
SPIRE1-202ENST00000409402 CHD6Q8TD26 2715 aa14.85□□□□□ -0.03
SPIRE1-202ENST00000409402 RANBP2P49792 3224 aaKnown RBP14.82□□□□□ -0.04
SPIRE1-202ENST00000409402 AKAP13Q12802 2813 aa14.81□□□□□ -0.04
SPIRE1-202ENST00000409402 TRANK1O15050 2925 aa14.81□□□□□ -0.04
SPIRE1-202ENST00000409402 BAHCC1Q9P281 2608 aa14.81□□□□□ -0.04
SPIRE1-202ENST00000409402 UNC79Q9P2D8 2635 aa14.8□□□□□ -0.04
SPIRE1-202ENST00000409402 KRTAP4-16G5E9R7 235 aaPredicted RBP14.74□□□□□ -0.05
SPIRE1-202ENST00000409402 NBEAL1Q6ZS30 2694 aa14.72□□□□□ -0.05
SPIRE1-202ENST00000409402 IGSF10Q6WRI0 2623 aa14.69□□□□□ -0.06
SPIRE1-202ENST00000409402 A0A087X002 238 aa14.68□□□□□ -0.06
SPIRE1-202ENST00000409402 PCNTO95613 3336 aa14.6□□□□□ -0.07
SPIRE1-202ENST00000409402 NOTCH1P46531 2555 aa14.6□□□□□ -0.07
SPIRE1-202ENST00000409402 Q6ZRN7 208 aaPredicted RBP14.59□□□□□ -0.07
SPIRE1-202ENST00000409402 M0QZ58 72 aa14.58□□□□□ -0.08
SPIRE1-202ENST00000409402 GCN1Q92616 2671 aaKnown RBP14.57□□□□□ -0.08
SPIRE1-202ENST00000409402 KRTAP21-3Q3LHN1 58 aa14.57□□□□□ -0.08
SPIRE1-202ENST00000409402 LAMA3Q16787 3333 aa14.55□□□□□ -0.08
SPIRE1-202ENST00000409402 DSPP15924 2871 aaKnown RBP14.51□□□□□ -0.09
SPIRE1-202ENST00000409402 CFAP54Q96N23 3096 aa14.51□□□□□ -0.09
SPIRE1-202ENST00000409402 RPS29P62273 56 aaKnown RBP14.5□□□□□ -0.09
SPIRE1-202ENST00000409402 CYSTM1Q9H1C7 97 aa14.49□□□□□ -0.09
SPIRE1-202ENST00000409402 RPL37P61927 97 aaKnown RBP14.48□□□□□ -0.09
SPIRE1-202ENST00000409402 Q5VV11 94 aa14.46□□□□□ -0.1
SPIRE1-202ENST00000409402 PLAC4Q8WY50 150 aa14.45□□□□□ -0.1
SPIRE1-202ENST00000409402 H1FX-AS1Q4G0G2 97 aa14.44□□□□□ -0.1
SPIRE1-202ENST00000409402 ADM2Q7Z4H4 148 aa14.43□□□□□ -0.1
SPIRE1-202ENST00000409402 ASB16-AS1Q495Z4 193 aa14.42□□□□□ -0.1
SPIRE1-202ENST00000409402 MKI67P46013 3256 aaKnown RBP14.42□□□□□ -0.1
SPIRE1-202ENST00000409402 KRTAP29-1A8MX34 341 aaPredicted RBP14.42□□□□□ -0.1
SPIRE1-202ENST00000409402 WDFY4Q6ZS81 3184 aa14.42□□□□□ -0.1
SPIRE1-202ENST00000409402 KRTAP11-1Q8IUC1 163 aa14.42□□□□□ -0.1
SPIRE1-202ENST00000409402 FLG2Q5D862 2391 aaPredicted RBP14.36□□□□□ -0.11
SPIRE1-202ENST00000409402 Q5XG85 94 aa14.36□□□□□ -0.11
SPIRE1-202ENST00000409402 UBR5O95071 2799 aaPredicted RBP14.34□□□□□ -0.11
SPIRE1-202ENST00000409402 ITPR2Q14571 2701 aa14.32□□□□□ -0.12
SPIRE1-202ENST00000409402 NOTCH2NLQ7Z3S9 236 aa14.3□□□□□ -0.12
SPIRE1-202ENST00000409402 ROMO1P60602 79 aa14.3□□□□□ -0.12
SPIRE1-202ENST00000409402 A0A0C4DFX4 3053 aa14.28□□□□□ -0.12
SPIRE1-202ENST00000409402 NSD1Q96L73 2696 aaPredicted RBP14.27□□□□□ -0.13
SPIRE1-202ENST00000409402 NBEAL2Q6ZNJ1 2754 aa14.27□□□□□ -0.13
SPIRE1-202ENST00000409402 PRUNE2Q8WUY3 3088 aa14.26□□□□□ -0.13
SPIRE1-202ENST00000409402 KRTAP7-1Q8IUC3 87 aa14.26□□□□□ -0.13
SPIRE1-202ENST00000409402 PRAC1Q96KF2 57 aa14.26□□□□□ -0.13
SPIRE1-202ENST00000409402 KRTAP13-2Q52LG2 175 aa14.24□□□□□ -0.13
SPIRE1-202ENST00000409402 BRCA2P51587 3418 aa14.22□□□□□ -0.13
SPIRE1-202ENST00000409402 SPATA8Q6RVD6 105 aa14.19□□□□□ -0.14
SPIRE1-202ENST00000409402 KRTAP13-1Q8IUC0 172 aa14.18□□□□□ -0.14
SPIRE1-202ENST00000409402 DMBT1Q9UGM3 2413 aaPredicted RBP14.18□□□□□ -0.14
SPIRE1-202ENST00000409402 MAP1AP78559 2803 aaPredicted RBP14.15□□□□□ -0.14
SPIRE1-202ENST00000409402 STAB2Q8WWQ8 2551 aa14.13□□□□□ -0.15
SPIRE1-202ENST00000409402 FRYQ5TBA9 3013 aa14.08□□□□□ -0.16
SPIRE1-202ENST00000409402 LAMA2P24043 3122 aaKnown RBP14.08□□□□□ -0.16
SPIRE1-202ENST00000409402 ITPR1Q14643 2758 aa14.07□□□□□ -0.16
SPIRE1-202ENST00000409402 TRIOO75962 3097 aa14.06□□□□□ -0.16
SPIRE1-202ENST00000409402 KMT2BQ9UMN6 2715 aaPredicted RBP14.06□□□□□ -0.16
SPIRE1-202ENST00000409402 A8MUU9 505 aa14.02□□□□□ -0.16
SPIRE1-202ENST00000409402 C20orf166-AS1Q96NR2 134 aa14□□□□□ -0.17
SPIRE1-202ENST00000409402 XIRP2A4UGR9 3374 aa13.96□□□□□ -0.18
SPIRE1-202ENST00000409402 A0A0A0MQY5 61 aa13.93□□□□□ -0.18
SPIRE1-202ENST00000409402 UNC80Q8N2C7 3258 aa13.9□□□□□ -0.18
SPIRE1-202ENST00000409402 VPS13AQ96RL7 3174 aa13.88□□□□□ -0.19
SPIRE1-202ENST00000409402 HIVEP1P15822 2718 aa13.87□□□□□ -0.19
SPIRE1-202ENST00000409402 FLNCQ14315 2725 aa13.85□□□□□ -0.19
SPIRE1-202ENST00000409402 CDH23Q9H251 3354 aa13.76□□□□□ -0.21
SPIRE1-202ENST00000409402 TACC2O95359 2948 aa13.75□□□□□ -0.21
SPIRE1-202ENST00000409402 ATMQ13315 3056 aa13.73□□□□□ -0.21
SPIRE1-202ENST00000409402 UTP20O75691 2785 aaKnown RBP13.73□□□□□ -0.21
SPIRE1-202ENST00000409402 A8MU10 97 aa13.72□□□□□ -0.21
SPIRE1-202ENST00000409402 TENM4Q6N022 2769 aa13.7□□□□□ -0.22
SPIRE1-202ENST00000409402 COL12A1Q99715 3063 aa13.67□□□□□ -0.22
SPIRE1-202ENST00000409402 REV3LO60673 3130 aa13.61□□□□□ -0.23
SPIRE1-202ENST00000409402 KRTAP1-4P0C5Y4 121 aa13.58□□□□□ -0.24
SPIRE1-202ENST00000409402 FRYLO94915 3013 aa13.58□□□□□ -0.24
SPIRE1-202ENST00000409402 KALRNO60229 2985 aa13.56□□□□□ -0.24
SPIRE1-202ENST00000409402 XP32Q5T750 250 aa13.54□□□□□ -0.24
SPIRE1-202ENST00000409402 APCP25054 2843 aa13.53□□□□□ -0.24
SPIRE1-202ENST00000409402 CELSR3Q9NYQ7 3312 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms