RNA–Protein interactions for RNA: ENST00000406610.6

PARD3B-204, Transcript of par-3 family cell polarity regulator beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PARD3B, Length 8,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-204ENST00000406610 TEX15Q9BXT5 2789 aa9.33□□□□□ -0.92
PARD3B-204ENST00000406610 LAMA2P24043 3122 aaKnown RBP9.33□□□□□ -0.92
PARD3B-204ENST00000406610 H1FX-AS1Q4G0G2 97 aa9.33□□□□□ -0.92
PARD3B-204ENST00000406610 Q8N9P0 234 aaPredicted RBP9.32□□□□□ -0.92
PARD3B-204ENST00000406610 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
PARD3B-204ENST00000406610 A0A0C4DFX4 3053 aa9.29□□□□□ -0.92
PARD3B-204ENST00000406610 ROMO1P60602 79 aa9.27□□□□□ -0.93
PARD3B-204ENST00000406610 HELZ2Q9BYK8 2649 aaKnown RBP9.26□□□□□ -0.93
PARD3B-204ENST00000406610 Q5W150 140 aa9.26□□□□□ -0.93
PARD3B-204ENST00000406610 PLAC4Q8WY50 150 aa9.26□□□□□ -0.93
PARD3B-204ENST00000406610 MMP24-AS1A0A0U1RRL7 71 aa9.25□□□□□ -0.93
PARD3B-204ENST00000406610 A0A096LNT2 108 aa9.25□□□□□ -0.93
PARD3B-204ENST00000406610 SEC61BP60468 96 aaKnown RBP9.24□□□□□ -0.93
PARD3B-204ENST00000406610 Q5VV11 94 aa9.23□□□□□ -0.93
PARD3B-204ENST00000406610 M0QZ58 72 aa9.23□□□□□ -0.93
PARD3B-204ENST00000406610 RPL37P61927 97 aaKnown RBP9.22□□□□□ -0.93
PARD3B-204ENST00000406610 COL6A5A8TX70 2615 aa9.22□□□□□ -0.93
PARD3B-204ENST00000406610 UNC79Q9P2D8 2635 aa9.2□□□□□ -0.94
PARD3B-204ENST00000406610 XIRP2A4UGR9 3374 aa9.2□□□□□ -0.94
PARD3B-204ENST00000406610 STAB2Q8WWQ8 2551 aa9.19□□□□□ -0.94
PARD3B-204ENST00000406610 Q5XG85 94 aa9.18□□□□□ -0.94
PARD3B-204ENST00000406610 PLAC8Q9NZF1 115 aa9.16□□□□□ -0.94
PARD3B-204ENST00000406610 FP248Q71RG6 208 aaPredicted RBP9.15□□□□□ -0.94
PARD3B-204ENST00000406610 NOTCH1P46531 2555 aa9.13□□□□□ -0.95
PARD3B-204ENST00000406610 FREM2Q5SZK8 3169 aa9.12□□□□□ -0.95
PARD3B-204ENST00000406610 ADM2Q7Z4H4 148 aa9.11□□□□□ -0.95
PARD3B-204ENST00000406610 Q5VSD8 79 aa9.09□□□□□ -0.95
PARD3B-204ENST00000406610 GCN1Q92616 2671 aaKnown RBP9.09□□□□□ -0.95
PARD3B-204ENST00000406610 CYSTM1Q9H1C7 97 aa9.09□□□□□ -0.95
PARD3B-204ENST00000406610 LINC00472Q9H8W2 130 aa9.09□□□□□ -0.95
PARD3B-204ENST00000406610 KRTAP1-3Q8IUG1 177 aa9.08□□□□□ -0.96
PARD3B-204ENST00000406610 REV3LO60673 3130 aa9.08□□□□□ -0.96
PARD3B-204ENST00000406610 SPATA8Q6RVD6 105 aa9.05□□□□□ -0.96
PARD3B-204ENST00000406610 CELSR3Q9NYQ7 3312 aa9.02□□□□□ -0.96
PARD3B-204ENST00000406610 MKI67P46013 3256 aaKnown RBP9.02□□□□□ -0.97
PARD3B-204ENST00000406610 KRTAP16-1A8MUX0 517 aa9.01□□□□□ -0.97
PARD3B-204ENST00000406610 SPRR1AP35321 89 aa9.01□□□□□ -0.97
PARD3B-204ENST00000406610 KRTAP1-1Q07627 177 aa9□□□□□ -0.97
PARD3B-204ENST00000406610 Q8NDZ9 215 aa9□□□□□ -0.97
PARD3B-204ENST00000406610 TRIOO75962 3097 aa8.98□□□□□ -0.97
PARD3B-204ENST00000406610 TEP1Q99973 2627 aaKnown RBP8.98□□□□□ -0.97
PARD3B-204ENST00000406610 C20orf166-AS1Q96NR2 134 aa8.98□□□□□ -0.97
PARD3B-204ENST00000406610 KRTAP26-1Q6PEX3 210 aa8.95□□□□□ -0.98
PARD3B-204ENST00000406610 MAP1AP78559 2803 aaPredicted RBP8.94□□□□□ -0.98
PARD3B-204ENST00000406610 MGAQ8IWI9 3026 aa8.93□□□□□ -0.98
PARD3B-204ENST00000406610 BAHCC1Q9P281 2608 aa8.92□□□□□ -0.98
PARD3B-204ENST00000406610 RANBP2P49792 3224 aaKnown RBP8.92□□□□□ -0.98
PARD3B-204ENST00000406610 KMT2BQ9UMN6 2715 aaPredicted RBP8.91□□□□□ -0.98
PARD3B-204ENST00000406610 SPRR1BP22528 89 aa8.91□□□□□ -0.98
PARD3B-204ENST00000406610 APCP25054 2843 aa8.91□□□□□ -0.98
PARD3B-204ENST00000406610 SETXQ7Z333 2677 aaKnown RBP8.9□□□□□ -0.98
PARD3B-204ENST00000406610 VPS13AQ96RL7 3174 aa8.9□□□□□ -0.98
PARD3B-204ENST00000406610 Q6ZR54 194 aa8.89□□□□□ -0.99
PARD3B-204ENST00000406610 PANO1I0J062 215 aa8.88□□□□□ -0.99
PARD3B-204ENST00000406610 ITPR2Q14571 2701 aa8.88□□□□□ -0.99
PARD3B-204ENST00000406610 KRTAP10-1P60331 282 aa8.86□□□□□ -0.99
PARD3B-204ENST00000406610 NBEAL2Q6ZNJ1 2754 aa8.85□□□□□ -0.99
PARD3B-204ENST00000406610 OXTP01178 125 aa8.84□□□□□ -0.99
PARD3B-204ENST00000406610 ASB16-AS1Q495Z4 193 aa8.84□□□□□ -0.99
PARD3B-204ENST00000406610 KRTAP10-2P60368 255 aa8.83□□□□□ -1
PARD3B-204ENST00000406610 FRYQ5TBA9 3013 aa8.83□□□□□ -1
PARD3B-204ENST00000406610 KRTAP1-5Q9BYS1 174 aa8.82□□□□□ -1
PARD3B-204ENST00000406610 UNC80Q8N2C7 3258 aa8.81□□□□□ -1
PARD3B-204ENST00000406610 WDFY4Q6ZS81 3184 aa8.79□□□□□ -1
PARD3B-204ENST00000406610 A8MUU9 505 aa8.79□□□□□ -1
PARD3B-204ENST00000406610 ZNF292O60281 2723 aa8.76□□□□□ -1.01
PARD3B-204ENST00000406610 TRANK1O15050 2925 aa8.76□□□□□ -1.01
PARD3B-204ENST00000406610 CHD7Q9P2D1 2997 aa8.76□□□□□ -1.01
PARD3B-204ENST00000406610 DSPP15924 2871 aaKnown RBP8.75□□□□□ -1.01
PARD3B-204ENST00000406610 KRTAP25-1Q3LHN0 102 aa8.75□□□□□ -1.01
PARD3B-204ENST00000406610 PRUNE2Q8WUY3 3088 aa8.75□□□□□ -1.01
PARD3B-204ENST00000406610 LCE6AA0A183 80 aa8.74□□□□□ -1.01
PARD3B-204ENST00000406610 NSD1Q96L73 2696 aaPredicted RBP8.72□□□□□ -1.01
PARD3B-204ENST00000406610 A0A087X002 238 aa8.72□□□□□ -1.01
PARD3B-204ENST00000406610 KALRNO60229 2985 aa8.72□□□□□ -1.01
PARD3B-204ENST00000406610 NDUFAF8A1L188 74 aa8.71□□□□□ -1.02
PARD3B-204ENST00000406610 A8MU10 97 aa8.71□□□□□ -1.02
PARD3B-204ENST00000406610 DNAH14Q0VDD8 3507 aa8.7□□□□□ -1.02
PARD3B-204ENST00000406610 CRYBG3Q68DQ2 2970 aa8.69□□□□□ -1.02
PARD3B-204ENST00000406610 LAMA3Q16787 3333 aa8.66□□□□□ -1.02
PARD3B-204ENST00000406610 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.02
PARD3B-204ENST00000406610 UTP20O75691 2785 aaKnown RBP8.64□□□□□ -1.03
PARD3B-204ENST00000406610 BRCA2P51587 3418 aa8.64□□□□□ -1.03
PARD3B-204ENST00000406610 IGSF10Q6WRI0 2623 aa8.62□□□□□ -1.03
PARD3B-204ENST00000406610 NOTCH2NLQ7Z3S9 236 aa8.62□□□□□ -1.03
PARD3B-204ENST00000406610 KRTAP29-1A8MX34 341 aaPredicted RBP8.61□□□□□ -1.03
PARD3B-204ENST00000406610 TNP1P09430 55 aa8.6□□□□□ -1.03
PARD3B-204ENST00000406610 UBR5O95071 2799 aaPredicted RBP8.6□□□□□ -1.03
PARD3B-204ENST00000406610 ASH1LQ9NR48 2969 aaKnown RBP8.6□□□□□ -1.03
PARD3B-204ENST00000406610 KRTAP4-16G5E9R7 235 aaPredicted RBP8.58□□□□□ -1.04
PARD3B-204ENST00000406610 DMXL2Q8TDJ6 3036 aa8.58□□□□□ -1.04
PARD3B-204ENST00000406610 FRYLO94915 3013 aa8.56□□□□□ -1.04
PARD3B-204ENST00000406610 ITPR1Q14643 2758 aa8.55□□□□□ -1.04
PARD3B-204ENST00000406610 A6NN06 94 aa8.54□□□□□ -1.04
PARD3B-204ENST00000406610 LRBAP50851 2863 aa8.53□□□□□ -1.04
PARD3B-204ENST00000406610 COL12A1Q99715 3063 aa8.52□□□□□ -1.05
PARD3B-204ENST00000406610 HTTP42858 3142 aa8.49□□□□□ -1.05
PARD3B-204ENST00000406610 CDH23Q9H251 3354 aa8.47□□□□□ -1.05
PARD3B-204ENST00000406610 COL6A3P12111 3177 aa8.47□□□□□ -1.05
PARD3B-204ENST00000406610 CFAP47Q6ZTR5 3102 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms