RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 J3QL48 77 aa2.26□□□□□ -2.05
RTN4-208ENST00000404909 LINC01547P58512 204 aaPredicted RBP2.26□□□□□ -2.05
RTN4-208ENST00000404909 H3BQ85 93 aa2.26□□□□□ -2.05
RTN4-208ENST00000404909 RBM3P98179 157 aaKnown RBP2.26□□□□□ -2.05
RTN4-208ENST00000404909 IGLV5-48A0A075B6I7 105 aa2.26□□□□□ -2.05
RTN4-208ENST00000404909 JMJD7-PLA2G4BH0Y9G9 81 aa2.26□□□□□ -2.05
RTN4-208ENST00000404909 J3QR89 54 aa2.26□□□□□ -2.05
RTN4-208ENST00000404909 K7ERU9 68 aa2.26□□□□□ -2.05
RTN4-208ENST00000404909 VPS25Q9BRG1 176 aa2.26□□□□□ -2.05
RTN4-208ENST00000404909 ANAPC11Q9NYG5 84 aa2.26□□□□□ -2.05
RTN4-208ENST00000404909 DSCR8Q96T75 97 aa2.25□□□□□ -2.05
RTN4-208ENST00000404909 F8WEM9 126 aa2.25□□□□□ -2.05
RTN4-208ENST00000404909 RPL37AP61513 92 aaKnown RBP2.25□□□□□ -2.05
RTN4-208ENST00000404909 KIAA1109Q2LD37 5005 aa2.25□□□□□ -2.05
RTN4-208ENST00000404909 HSPG2P98160 4391 aa2.25□□□□□ -2.05
RTN4-208ENST00000404909 IGLV9-49A0A0B4J1Y8 123 aa2.24□□□□□ -2.05
RTN4-208ENST00000404909 OBSCN-AS1Q96MR7 158 aa2.24□□□□□ -2.05
RTN4-208ENST00000404909 SPRR4Q96PI1 79 aa2.24□□□□□ -2.05
RTN4-208ENST00000404909 A0A0G2JQZ4 141 aa2.24□□□□□ -2.05
RTN4-208ENST00000404909 SMIM29Q86T20 159 aa2.24□□□□□ -2.05
RTN4-208ENST00000404909 ZNF706Q9Y5V0 76 aaPredicted RBP2.24□□□□□ -2.05
RTN4-208ENST00000404909 RYR1P21817 5038 aa2.24□□□□□ -2.05
RTN4-208ENST00000404909 C5orf47Q569G3 176 aa2.23□□□□□ -2.05
RTN4-208ENST00000404909 C9orf153Q5TBE3 101 aa2.23□□□□□ -2.05
RTN4-208ENST00000404909 CCKP06307 115 aa2.23□□□□□ -2.05
RTN4-208ENST00000404909 RPS28P62857 69 aaKnown RBP2.23□□□□□ -2.05
RTN4-208ENST00000404909 CDK2AP2O75956 126 aa2.23□□□□□ -2.05
RTN4-208ENST00000404909 Q6ZQT0 140 aa2.23□□□□□ -2.05
RTN4-208ENST00000404909 TRBV7-4A0A0J9YYF1 115 aa2.23□□□□□ -2.05
RTN4-208ENST00000404909 SPRR1BP22528 89 aa2.23□□□□□ -2.05
RTN4-208ENST00000404909 FLG2Q5D862 2391 aaPredicted RBP2.23□□□□□ -2.05
RTN4-208ENST00000404909 LOC110117498A0A087WWA1 95 aa2.22□□□□□ -2.05
RTN4-208ENST00000404909 Q6Q795 121 aa2.22□□□□□ -2.05
RTN4-208ENST00000404909 PDE6GP18545 87 aa2.22□□□□□ -2.05
RTN4-208ENST00000404909 MOBPQ13875 183 aa2.22□□□□□ -2.05
RTN4-208ENST00000404909 LINC00483Q53H64 154 aa2.22□□□□□ -2.05
RTN4-208ENST00000404909 IGFL1Q6UW32 110 aa2.22□□□□□ -2.05
RTN4-208ENST00000404909 PLA2G1BP04054 148 aaKnown RBP2.21□□□□□ -2.06
RTN4-208ENST00000404909 HRCT1Q6UXD1 115 aa2.21□□□□□ -2.06
RTN4-208ENST00000404909 A0A087X002 238 aa2.21□□□□□ -2.06
RTN4-208ENST00000404909 Q5VSD8 79 aa2.21□□□□□ -2.06
RTN4-208ENST00000404909 SPINK6Q6UWN8 80 aa2.21□□□□□ -2.06
RTN4-208ENST00000404909 CDIP1Q9H305 208 aa2.21□□□□□ -2.06
RTN4-208ENST00000404909 LINC00846Q9NV44 126 aa2.21□□□□□ -2.06
RTN4-208ENST00000404909 FAM240AA0A1B0GVK7 77 aa2.21□□□□□ -2.06
RTN4-208ENST00000404909 A0A1W2PNM2 257 aa2.21□□□□□ -2.06
RTN4-208ENST00000404909 ACYP1P07311 99 aa2.21□□□□□ -2.06
RTN4-208ENST00000404909 Q6JHZ5 121 aa2.2□□□□□ -2.06
RTN4-208ENST00000404909 SIGMAR1Q99720 223 aa2.2□□□□□ -2.06
RTN4-208ENST00000404909 IGLV8-61A0A075B6I0 122 aa2.2□□□□□ -2.06
RTN4-208ENST00000404909 KRTAP1-4P0C5Y4 121 aa2.2□□□□□ -2.06
RTN4-208ENST00000404909 KRTAP10-4P60372 401 aaPredicted RBP2.2□□□□□ -2.06
RTN4-208ENST00000404909 Q8NBF4 154 aa2.2□□□□□ -2.06
RTN4-208ENST00000404909 CRYGAP11844 174 aa2.2□□□□□ -2.06
RTN4-208ENST00000404909 A0A087WSZ3 146 aa2.19□□□□□ -2.06
RTN4-208ENST00000404909 UBL5Q9BZL1 73 aa2.19□□□□□ -2.06
RTN4-208ENST00000404909 LRP1Q07954 4544 aaKnown RBP2.19□□□□□ -2.06
RTN4-208ENST00000404909 PRR26Q8N8Z3 221 aa2.19□□□□□ -2.06
RTN4-208ENST00000404909 KRTAP13-2Q52LG2 175 aa2.19□□□□□ -2.06
RTN4-208ENST00000404909 MYCBP2O75592 4640 aa2.19□□□□□ -2.06
RTN4-208ENST00000404909 NREPQ16612 68 aa2.19□□□□□ -2.06
RTN4-208ENST00000404909 FAM229BQ4G0N7 80 aa2.19□□□□□ -2.06
RTN4-208ENST00000404909 MT-ATP8P03928 68 aa2.18□□□□□ -2.06
RTN4-208ENST00000404909 Q6ZVQ6 151 aa2.18□□□□□ -2.06
RTN4-208ENST00000404909 TYMSOSQ8TAI1 123 aa2.18□□□□□ -2.06
RTN4-208ENST00000404909 DMBT1Q9UGM3 2413 aaPredicted RBP2.18□□□□□ -2.06
RTN4-208ENST00000404909 IGKV3D-7A0A0C4DH55 119 aa2.18□□□□□ -2.06
RTN4-208ENST00000404909 LCE2BO14633 110 aa2.18□□□□□ -2.06
RTN4-208ENST00000404909 DEFB116Q30KQ4 102 aa2.18□□□□□ -2.06
RTN4-208ENST00000404909 SSBP3-AS1Q7Z2R9 100 aa2.18□□□□□ -2.06
RTN4-208ENST00000404909 LINC00643Q86TS7 51 aa2.18□□□□□ -2.06
RTN4-208ENST00000404909 Q8N1X5 172 aa2.18□□□□□ -2.06
RTN4-208ENST00000404909 TRBV7-7A0A0K0K1E9 115 aa2.17□□□□□ -2.06
RTN4-208ENST00000404909 BIRC6Q9NR09 4857 aa2.17□□□□□ -2.06
RTN4-208ENST00000404909 PKHD1L1Q86WI1 4243 aa2.17□□□□□ -2.06
RTN4-208ENST00000404909 A0A1B0GW54 56 aa2.16□□□□□ -2.06
RTN4-208ENST00000404909 BPY2O14599 106 aa2.16□□□□□ -2.06
RTN4-208ENST00000404909 HIST1H4AP62805 103 aaKnown RBP2.16□□□□□ -2.06
RTN4-208ENST00000404909 Q5XG85 94 aa2.16□□□□□ -2.06
RTN4-208ENST00000404909 Q8N9L7 120 aa2.15□□□□□ -2.06
RTN4-208ENST00000404909 LINC00304Q8N9R0 145 aa2.15□□□□□ -2.07
RTN4-208ENST00000404909 SS18L2Q9UHA2 77 aa2.15□□□□□ -2.07
RTN4-208ENST00000404909 TNXBP22105 4242 aa2.15□□□□□ -2.07
RTN4-208ENST00000404909 CD164Q04900 197 aa2.15□□□□□ -2.07
RTN4-208ENST00000404909 KRTAP4-5Q9BYR2 181 aa2.15□□□□□ -2.07
RTN4-208ENST00000404909 FAT3Q8TDW7 4589 aa2.15□□□□□ -2.07
RTN4-208ENST00000404909 ABCA13Q86UQ4 5058 aa2.15□□□□□ -2.07
RTN4-208ENST00000404909 ATP5EP2Q5VTU8 51 aa2.15□□□□□ -2.07
RTN4-208ENST00000404909 HERC2O95714 4834 aa2.14□□□□□ -2.07
RTN4-208ENST00000404909 A0A087WVE0 104 aa2.14□□□□□ -2.07
RTN4-208ENST00000404909 SPINK1P00995 79 aa2.14□□□□□ -2.07
RTN4-208ENST00000404909 IGKV4-1P06312 121 aa2.14□□□□□ -2.07
RTN4-208ENST00000404909 CXCL6P80162 114 aa2.14□□□□□ -2.07
RTN4-208ENST00000404909 LINC00472Q9H8W2 130 aa2.14□□□□□ -2.07
RTN4-208ENST00000404909 K7EQZ3 153 aa2.13□□□□□ -2.07
RTN4-208ENST00000404909 DSCR10P59022 87 aa2.13□□□□□ -2.07
RTN4-208ENST00000404909 LIMD2Q9BT23 127 aa2.13□□□□□ -2.07
RTN4-208ENST00000404909 Q96NJ1 140 aa2.13□□□□□ -2.07
RTN4-208ENST00000404909 PRR4Q16378 134 aa2.13□□□□□ -2.07
RTN4-208ENST00000404909 SPAG11AQ6PDA7 123 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms