RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 IGLV9-49A0A0B4J1Y8 123 aa9.34□□□□□ -0.91
HMGA1-204ENST00000401473 H3BUT2 72 aa9.34□□□□□ -0.91
HMGA1-204ENST00000401473 C9orf118A6NHY6 69 aa9.32□□□□□ -0.92
HMGA1-204ENST00000401473 LST1O00453 97 aa9.32□□□□□ -0.92
HMGA1-204ENST00000401473 SNCGO76070 127 aa9.32□□□□□ -0.92
HMGA1-204ENST00000401473 UBE2V1Q13404 147 aa9.31□□□□□ -0.92
HMGA1-204ENST00000401473 TCL1BO95988 128 aa9.3□□□□□ -0.92
HMGA1-204ENST00000401473 MOBPQ13875 183 aa9.3□□□□□ -0.92
HMGA1-204ENST00000401473 LAMTOR3Q9UHA4 124 aa9.29□□□□□ -0.92
HMGA1-204ENST00000401473 TRACP01848 142 aa9.28□□□□□ -0.92
HMGA1-204ENST00000401473 OCIAD2Q56VL3 154 aa9.28□□□□□ -0.92
HMGA1-204ENST00000401473 A0A1W2PPM0 123 aa9.27□□□□□ -0.93
HMGA1-204ENST00000401473 DNAL4O96015 105 aa9.27□□□□□ -0.93
HMGA1-204ENST00000401473 C9orf153Q5TBE3 101 aa9.26□□□□□ -0.93
HMGA1-204ENST00000401473 SSBP3-AS1Q7Z2R9 100 aa9.26□□□□□ -0.93
HMGA1-204ENST00000401473 Q8NBF4 154 aa9.26□□□□□ -0.93
HMGA1-204ENST00000401473 PPDPFLQ8WWR9 84 aa9.25□□□□□ -0.93
HMGA1-204ENST00000401473 ORMDL1Q9P0S3 153 aa9.24□□□□□ -0.93
HMGA1-204ENST00000401473 A0A0G2JQZ4 141 aa9.23□□□□□ -0.93
HMGA1-204ENST00000401473 ATXN8Q156A1 80 aa9.23□□□□□ -0.93
HMGA1-204ENST00000401473 LINC00304Q8N9R0 145 aa9.23□□□□□ -0.93
HMGA1-204ENST00000401473 HMCN2Q8NDA2 5059 aa9.23□□□□□ -0.93
HMGA1-204ENST00000401473 FABP2P12104 132 aa9.23□□□□□ -0.93
HMGA1-204ENST00000401473 TRBV20-1A0A075B6N2 111 aa9.22□□□□□ -0.93
HMGA1-204ENST00000401473 LYRM7Q5U5X0 104 aa9.21□□□□□ -0.93
HMGA1-204ENST00000401473 NDUFV3P56181 108 aaKnown RBP9.21□□□□□ -0.94
HMGA1-204ENST00000401473 TMEM256-PLSCR3K7ERE1 68 aa9.2□□□□□ -0.94
HMGA1-204ENST00000401473 GHRHP01286 108 aa9.19□□□□□ -0.94
HMGA1-204ENST00000401473 C21orf62-AS1Q17RA5 79 aa9.19□□□□□ -0.94
HMGA1-204ENST00000401473 IGLV8-61A0A075B6I0 122 aa9.19□□□□□ -0.94
HMGA1-204ENST00000401473 K7EP34 96 aa9.19□□□□□ -0.94
HMGA1-204ENST00000401473 BAALC-AS2P0C853 105 aa9.19□□□□□ -0.94
HMGA1-204ENST00000401473 F8WEM9 126 aa9.18□□□□□ -0.94
HMGA1-204ENST00000401473 H3BMG7 143 aa9.18□□□□□ -0.94
HMGA1-204ENST00000401473 PCP4P48539 62 aa9.17□□□□□ -0.94
HMGA1-204ENST00000401473 GTF2H5Q6ZYL4 71 aa9.17□□□□□ -0.94
HMGA1-204ENST00000401473 H3BQ85 93 aa9.16□□□□□ -0.94
HMGA1-204ENST00000401473 C4orf48Q5BLP8 95 aa9.16□□□□□ -0.94
HMGA1-204ENST00000401473 SPAG11AQ6PDA7 123 aa9.16□□□□□ -0.94
HMGA1-204ENST00000401473 SPCS1Q9Y6A9 102 aa9.16□□□□□ -0.94
HMGA1-204ENST00000401473 C9JAW5 83 aa9.15□□□□□ -0.94
HMGA1-204ENST00000401473 IGFL1Q6UW32 110 aa9.15□□□□□ -0.94
HMGA1-204ENST00000401473 HRCT1Q6UXD1 115 aa9.15□□□□□ -0.94
HMGA1-204ENST00000401473 SPINK1P00995 79 aa9.15□□□□□ -0.95
HMGA1-204ENST00000401473 A0A1B0GV72 72 aa9.13□□□□□ -0.95
HMGA1-204ENST00000401473 MTURNQ8N3F0 131 aa9.13□□□□□ -0.95
HMGA1-204ENST00000401473 Q6JHZ5 121 aa9.12□□□□□ -0.95
HMGA1-204ENST00000401473 ANKRD29Q8N6D5 301 aa9.12□□□□□ -0.95
HMGA1-204ENST00000401473 CD164Q04900 197 aa9.09□□□□□ -0.95
HMGA1-204ENST00000401473 RETNLBQ9BQ08 111 aa9.08□□□□□ -0.96
HMGA1-204ENST00000401473 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
HMGA1-204ENST00000401473 LRP2P98164 4655 aa9.07□□□□□ -0.96
HMGA1-204ENST00000401473 LPAP08519 4548 aa9.06□□□□□ -0.96
HMGA1-204ENST00000401473 SMCPP49901 116 aaPredicted RBP9.06□□□□□ -0.96
HMGA1-204ENST00000401473 RBM3P98179 157 aaKnown RBP9.06□□□□□ -0.96
HMGA1-204ENST00000401473 A0A1W2PNM2 257 aa9.04□□□□□ -0.96
HMGA1-204ENST00000401473 H3BT86 120 aa9.04□□□□□ -0.96
HMGA1-204ENST00000401473 PRO0461Q9UI25 63 aa9.04□□□□□ -0.96
HMGA1-204ENST00000401473 TRBV7-4A0A0J9YYF1 115 aa9.04□□□□□ -0.96
HMGA1-204ENST00000401473 TRBV7-7A0A0K0K1E9 115 aa9.02□□□□□ -0.96
HMGA1-204ENST00000401473 Q6Q795 121 aa9.02□□□□□ -0.96
HMGA1-204ENST00000401473 TEN1Q86WV5 123 aa9.02□□□□□ -0.96
HMGA1-204ENST00000401473 OBSCN-AS1Q96MR7 158 aa9.02□□□□□ -0.96
HMGA1-204ENST00000401473 JMJD7-PLA2G4BH0Y9G9 81 aa9.01□□□□□ -0.97
HMGA1-204ENST00000401473 Q5XG85 94 aa9.01□□□□□ -0.97
HMGA1-204ENST00000401473 DSCR8Q96T75 97 aa9.01□□□□□ -0.97
HMGA1-204ENST00000401473 F8W1H4 67 aa9□□□□□ -0.97
HMGA1-204ENST00000401473 CCKP06307 115 aa8.99□□□□□ -0.97
HMGA1-204ENST00000401473 PRR4Q16378 134 aa8.99□□□□□ -0.97
HMGA1-204ENST00000401473 LIMD2Q9BT23 127 aa8.99□□□□□ -0.97
HMGA1-204ENST00000401473 C14orf132Q9NPU4 83 aa8.98□□□□□ -0.97
HMGA1-204ENST00000401473 UBR4Q5T4S7 5183 aa8.96□□□□□ -0.97
HMGA1-204ENST00000401473 A0A087WSZ3 146 aa8.96□□□□□ -0.97
HMGA1-204ENST00000401473 Q6ZQT0 140 aa8.96□□□□□ -0.97
HMGA1-204ENST00000401473 K7ERU9 68 aa8.96□□□□□ -0.98
HMGA1-204ENST00000401473 C1orf195Q5TG92 126 aa8.95□□□□□ -0.98
HMGA1-204ENST00000401473 VPS25Q9BRG1 176 aa8.95□□□□□ -0.98
HMGA1-204ENST00000401473 LOC110117498A0A087WWA1 95 aa8.94□□□□□ -0.98
HMGA1-204ENST00000401473 ASB16-AS1Q495Z4 193 aa8.92□□□□□ -0.98
HMGA1-204ENST00000401473 IGLV7-46A0A075B6I9 117 aa8.91□□□□□ -0.98
HMGA1-204ENST00000401473 ETDBQ3ZM63 59 aa8.91□□□□□ -0.98
HMGA1-204ENST00000401473 FP248Q71RG6 208 aaPredicted RBP8.91□□□□□ -0.98
HMGA1-204ENST00000401473 PDE6GP18545 87 aa8.9□□□□□ -0.98
HMGA1-204ENST00000401473 SS18L2Q9UHA2 77 aa8.88□□□□□ -0.99
HMGA1-204ENST00000401473 Q96NJ1 140 aa8.87□□□□□ -0.99
HMGA1-204ENST00000401473 TPRXLQ17RH7 258 aa8.83□□□□□ -1
HMGA1-204ENST00000401473 KRTAP13-3Q3SY46 172 aa8.83□□□□□ -1
HMGA1-204ENST00000401473 LINC00472Q9H8W2 130 aa8.83□□□□□ -1
HMGA1-204ENST00000401473 A0A1B0GW54 56 aa8.82□□□□□ -1
HMGA1-204ENST00000401473 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
HMGA1-204ENST00000401473 J3QR89 54 aa8.81□□□□□ -1
HMGA1-204ENST00000401473 RNF213Q63HN8 5207 aa8.78□□□□□ -1
HMGA1-204ENST00000401473 C9orf92A6NGG3 77 aa8.76□□□□□ -1.01
HMGA1-204ENST00000401473 IGKV4-1P06312 121 aa8.76□□□□□ -1.01
HMGA1-204ENST00000401473 CDIP1Q9H305 208 aa8.76□□□□□ -1.01
HMGA1-204ENST00000401473 NREPQ16612 68 aa8.73□□□□□ -1.01
HMGA1-204ENST00000401473 LINC00846Q9NV44 126 aa8.72□□□□□ -1.01
HMGA1-204ENST00000401473 SIGMAR1Q99720 223 aa8.71□□□□□ -1.01
HMGA1-204ENST00000401473 MUC2Q02817 5179 aa8.71□□□□□ -1.02
HMGA1-204ENST00000401473 XP32Q5T750 250 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms