RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 S4R3F8 94 aa8.2□□□□□ -1.1
DDX3X-201ENST00000399959 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
DDX3X-201ENST00000399959 KRTAP1-3Q8IUG1 177 aa8.18□□□□□ -1.1
DDX3X-201ENST00000399959 DNAH12Q6ZR08 3092 aa8.16□□□□□ -1.1
DDX3X-201ENST00000399959 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
DDX3X-201ENST00000399959 GOLGB1Q14789 3259 aaKnown RBP8.16□□□□□ -1.1
DDX3X-201ENST00000399959 KRTAP1-1Q07627 177 aa8.13□□□□□ -1.11
DDX3X-201ENST00000399959 Q6ZSA8 131 aa8.11□□□□□ -1.11
DDX3X-201ENST00000399959 USP24Q9UPU5 2620 aa8.1□□□□□ -1.11
DDX3X-201ENST00000399959 EPG5Q9HCE0 2579 aa8.1□□□□□ -1.11
DDX3X-201ENST00000399959 A0A0C4DFX4 3053 aa8.09□□□□□ -1.12
DDX3X-201ENST00000399959 R4GN34 69 aa8.04□□□□□ -1.12
DDX3X-201ENST00000399959 NDUFAF8A1L188 74 aa8.03□□□□□ -1.12
DDX3X-201ENST00000399959 A0A087X002 238 aa8.03□□□□□ -1.12
DDX3X-201ENST00000399959 FASNP49327 2511 aaKnown RBP8.02□□□□□ -1.13
DDX3X-201ENST00000399959 NOTCH2NLQ7Z3S9 236 aa8.01□□□□□ -1.13
DDX3X-201ENST00000399959 PANO1I0J062 215 aa8□□□□□ -1.13
DDX3X-201ENST00000399959 KRTAP1-5Q9BYS1 174 aa7.98□□□□□ -1.13
DDX3X-201ENST00000399959 CEP350Q5VT06 3117 aa7.94□□□□□ -1.14
DDX3X-201ENST00000399959 MGAM2Q2M2H8 2515 aa7.94□□□□□ -1.14
DDX3X-201ENST00000399959 M0QZ58 72 aa7.92□□□□□ -1.14
DDX3X-201ENST00000399959 FLNAP21333 2647 aaKnown RBP7.89□□□□□ -1.15
DDX3X-201ENST00000399959 A8MUU9 505 aa7.87□□□□□ -1.15
DDX3X-201ENST00000399959 CFAP54Q96N23 3096 aa7.84□□□□□ -1.15
DDX3X-201ENST00000399959 ATRQ13535 2644 aa7.83□□□□□ -1.16
DDX3X-201ENST00000399959 C5orf42Q9H799 3197 aa7.81□□□□□ -1.16
DDX3X-201ENST00000399959 KRTAP11-1Q8IUC1 163 aa7.81□□□□□ -1.16
DDX3X-201ENST00000399959 AKAP13Q12802 2813 aa7.81□□□□□ -1.16
DDX3X-201ENST00000399959 KRTAP7-1Q8IUC3 87 aa7.81□□□□□ -1.16
DDX3X-201ENST00000399959 UTRNP46939 3433 aa7.8□□□□□ -1.16
DDX3X-201ENST00000399959 ITPR3Q14573 2671 aa7.78□□□□□ -1.16
DDX3X-201ENST00000399959 CHD6Q8TD26 2715 aa7.78□□□□□ -1.16
DDX3X-201ENST00000399959 PLAC4Q8WY50 150 aa7.78□□□□□ -1.16
DDX3X-201ENST00000399959 UNC79Q9P2D8 2635 aa7.77□□□□□ -1.17
DDX3X-201ENST00000399959 PCNTO95613 3336 aa7.76□□□□□ -1.17
DDX3X-201ENST00000399959 CHD7Q9P2D1 2997 aa7.76□□□□□ -1.17
DDX3X-201ENST00000399959 DMBT1Q9UGM3 2413 aaPredicted RBP7.76□□□□□ -1.17
DDX3X-201ENST00000399959 GCN1Q92616 2671 aaKnown RBP7.75□□□□□ -1.17
DDX3X-201ENST00000399959 FLG2Q5D862 2391 aaPredicted RBP7.75□□□□□ -1.17
DDX3X-201ENST00000399959 NBEAL1Q6ZS30 2694 aa7.75□□□□□ -1.17
DDX3X-201ENST00000399959 HECTD1Q9ULT8 2610 aa7.73□□□□□ -1.17
DDX3X-201ENST00000399959 KRTAP10-1P60331 282 aa7.71□□□□□ -1.18
DDX3X-201ENST00000399959 C20orf166-AS1Q96NR2 134 aa7.7□□□□□ -1.18
DDX3X-201ENST00000399959 M0R2T5 61 aa7.69□□□□□ -1.18
DDX3X-201ENST00000399959 KRTAP10-2P60368 255 aa7.68□□□□□ -1.18
DDX3X-201ENST00000399959 KRTAP13-1Q8IUC0 172 aa7.67□□□□□ -1.18
DDX3X-201ENST00000399959 CENPEQ02224 2701 aa7.66□□□□□ -1.18
DDX3X-201ENST00000399959 MAST4O15021 2626 aa7.63□□□□□ -1.19
DDX3X-201ENST00000399959 RPS29P62273 56 aaKnown RBP7.61□□□□□ -1.19
DDX3X-201ENST00000399959 NBEAL2Q6ZNJ1 2754 aa7.6□□□□□ -1.19
DDX3X-201ENST00000399959 CHD9Q3L8U1 2897 aa7.58□□□□□ -1.2
DDX3X-201ENST00000399959 NOTCH1P46531 2555 aa7.58□□□□□ -1.2
DDX3X-201ENST00000399959 KRTAP13-2Q52LG2 175 aa7.56□□□□□ -1.2
DDX3X-201ENST00000399959 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
DDX3X-201ENST00000399959 FLNBO75369 2602 aaKnown RBP7.55□□□□□ -1.2
DDX3X-201ENST00000399959 H0YAA0 97 aa7.54□□□□□ -1.2
DDX3X-201ENST00000399959 HELZ2Q9BYK8 2649 aaKnown RBP7.53□□□□□ -1.2
DDX3X-201ENST00000399959 LAMA2P24043 3122 aaKnown RBP7.51□□□□□ -1.21
DDX3X-201ENST00000399959 Q6ZRN7 208 aaPredicted RBP7.51□□□□□ -1.21
DDX3X-201ENST00000399959 MGAQ8IWI9 3026 aa7.5□□□□□ -1.21
DDX3X-201ENST00000399959 Q5VSD8 79 aa7.5□□□□□ -1.21
DDX3X-201ENST00000399959 STAB1Q9NY15 2570 aa7.49□□□□□ -1.21
DDX3X-201ENST00000399959 FREM2Q5SZK8 3169 aa7.47□□□□□ -1.21
DDX3X-201ENST00000399959 CFAP46Q8IYW2 2715 aa7.46□□□□□ -1.21
DDX3X-201ENST00000399959 FRYQ5TBA9 3013 aa7.45□□□□□ -1.22
DDX3X-201ENST00000399959 TRIOO75962 3097 aa7.45□□□□□ -1.22
DDX3X-201ENST00000399959 P0C880 135 aa7.45□□□□□ -1.22
DDX3X-201ENST00000399959 COL6A5A8TX70 2615 aa7.43□□□□□ -1.22
DDX3X-201ENST00000399959 TEX15Q9BXT5 2789 aa7.42□□□□□ -1.22
DDX3X-201ENST00000399959 BAHCC1Q9P281 2608 aa7.42□□□□□ -1.22
DDX3X-201ENST00000399959 ITPR1Q14643 2758 aa7.42□□□□□ -1.22
DDX3X-201ENST00000399959 STAB2Q8WWQ8 2551 aa7.41□□□□□ -1.22
DDX3X-201ENST00000399959 TNP1P09430 55 aa7.4□□□□□ -1.22
DDX3X-201ENST00000399959 HTTP42858 3142 aa7.4□□□□□ -1.22
DDX3X-201ENST00000399959 PP632Q6XCG6 107 aa7.4□□□□□ -1.23
DDX3X-201ENST00000399959 MKI67P46013 3256 aaKnown RBP7.39□□□□□ -1.23
DDX3X-201ENST00000399959 TRANK1O15050 2925 aa7.38□□□□□ -1.23
DDX3X-201ENST00000399959 KALRNO60229 2985 aa7.36□□□□□ -1.23
DDX3X-201ENST00000399959 SETXQ7Z333 2677 aaKnown RBP7.33□□□□□ -1.24
DDX3X-201ENST00000399959 WDFY4Q6ZS81 3184 aa7.31□□□□□ -1.24
DDX3X-201ENST00000399959 NBEAQ8NFP9 2946 aa7.31□□□□□ -1.24
DDX3X-201ENST00000399959 DSPP15924 2871 aaKnown RBP7.29□□□□□ -1.24
DDX3X-201ENST00000399959 MAP1AP78559 2803 aaPredicted RBP7.28□□□□□ -1.24
DDX3X-201ENST00000399959 TEP1Q99973 2627 aaKnown RBP7.27□□□□□ -1.25
DDX3X-201ENST00000399959 RANBP2P49792 3224 aaKnown RBP7.26□□□□□ -1.25
DDX3X-201ENST00000399959 VPS13AQ96RL7 3174 aa7.25□□□□□ -1.25
DDX3X-201ENST00000399959 APCP25054 2843 aa7.25□□□□□ -1.25
DDX3X-201ENST00000399959 KRTAP10-8P60410 259 aa7.23□□□□□ -1.25
DDX3X-201ENST00000399959 UBR5O95071 2799 aaPredicted RBP7.21□□□□□ -1.26
DDX3X-201ENST00000399959 ZNF292O60281 2723 aa7.2□□□□□ -1.26
DDX3X-201ENST00000399959 NSD1Q96L73 2696 aaPredicted RBP7.2□□□□□ -1.26
DDX3X-201ENST00000399959 PRUNE2Q8WUY3 3088 aa7.19□□□□□ -1.26
DDX3X-201ENST00000399959 LAMA3Q16787 3333 aa7.18□□□□□ -1.26
DDX3X-201ENST00000399959 CELSR3Q9NYQ7 3312 aa7.17□□□□□ -1.26
DDX3X-201ENST00000399959 ASH1LQ9NR48 2969 aaKnown RBP7.17□□□□□ -1.26
DDX3X-201ENST00000399959 KRTAP13-3Q3SY46 172 aa7.15□□□□□ -1.26
DDX3X-201ENST00000399959 UNC80Q8N2C7 3258 aa7.13□□□□□ -1.27
DDX3X-201ENST00000399959 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
DDX3X-201ENST00000399959 LRBAP50851 2863 aa7.12□□□□□ -1.27
DDX3X-201ENST00000399959 XIRP2A4UGR9 3374 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms