RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 LCE6AA0A183 80 aa3.98□□□□□ -1.77
SMCO1-201ENST00000397537 PIGYQ3MUY2 71 aa3.98□□□□□ -1.77
SMCO1-201ENST00000397537 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
SMCO1-201ENST00000397537 HIGD2AQ9BW72 106 aa3.98□□□□□ -1.77
SMCO1-201ENST00000397537 LRCOL1A6NCL2 159 aa3.98□□□□□ -1.77
SMCO1-201ENST00000397537 RTL8CO15255 209 aa3.98□□□□□ -1.77
SMCO1-201ENST00000397537 ARFGEF3Q5TH69 2177 aa3.97□□□□□ -1.77
SMCO1-201ENST00000397537 DEFB108AA8MXU0 73 aa3.97□□□□□ -1.77
SMCO1-201ENST00000397537 MRGPRG-AS1Q2M3A8 158 aa3.96□□□□□ -1.78
SMCO1-201ENST00000397537 ARHGAP32A7KAX9 2087 aa3.96□□□□□ -1.78
SMCO1-201ENST00000397537 ERHP84090 104 aaKnown RBP3.95□□□□□ -1.78
SMCO1-201ENST00000397537 ZNF625Q96I27 306 aaPredicted RBP3.95□□□□□ -1.78
SMCO1-201ENST00000397537 LINC00208Q96KT6 92 aa3.95□□□□□ -1.78
SMCO1-201ENST00000397537 LENEPQ9Y5L5 61 aa3.95□□□□□ -1.78
SMCO1-201ENST00000397537 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.95□□□□□ -1.78
SMCO1-201ENST00000397537 LOC110117498A0A087WWA1 95 aa3.94□□□□□ -1.78
SMCO1-201ENST00000397537 DEFB110Q30KQ9 67 aa3.94□□□□□ -1.78
SMCO1-201ENST00000397537 LINC01558Q9Y6Z2 57 aa3.94□□□□□ -1.78
SMCO1-201ENST00000397537 PRR14LQ5THK1 2151 aa3.94□□□□□ -1.78
SMCO1-201ENST00000397537 TRBV10-1A0A0K0K1A3 114 aa3.93□□□□□ -1.78
SMCO1-201ENST00000397537 A0A1W2PNM2 257 aa3.93□□□□□ -1.78
SMCO1-201ENST00000397537 HAMPP81172 84 aa3.93□□□□□ -1.78
SMCO1-201ENST00000397537 DEFB114Q30KQ6 69 aa3.93□□□□□ -1.78
SMCO1-201ENST00000397537 SPINK9Q5DT21 86 aa3.93□□□□□ -1.78
SMCO1-201ENST00000397537 ZCCHC13Q8WW36 166 aaKnown RBP3.93□□□□□ -1.78
SMCO1-201ENST00000397537 ABCA13Q86UQ4 5058 aa3.93□□□□□ -1.78
SMCO1-201ENST00000397537 STAB2Q8WWQ8 2551 aa3.93□□□□□ -1.78
SMCO1-201ENST00000397537 DNAH9Q9NYC9 4486 aa3.93□□□□□ -1.78
SMCO1-201ENST00000397537 CLPSL1A2RUU4 121 aa3.93□□□□□ -1.78
SMCO1-201ENST00000397537 NCR3O14931 201 aa3.93□□□□□ -1.78
SMCO1-201ENST00000397537 PSORS1C2Q9UIG4 136 aa3.93□□□□□ -1.78
SMCO1-201ENST00000397537 KIAA1109Q2LD37 5005 aa3.92□□□□□ -1.78
SMCO1-201ENST00000397537 ALPK2Q86TB3 2170 aa3.92□□□□□ -1.78
SMCO1-201ENST00000397537 HCP5Q6MZN7 132 aa3.92□□□□□ -1.78
SMCO1-201ENST00000397537 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
SMCO1-201ENST00000397537 LINC00167Q96N53 147 aa3.92□□□□□ -1.78
SMCO1-201ENST00000397537 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
SMCO1-201ENST00000397537 KLK9Q9UKQ9 250 aa3.92□□□□□ -1.78
SMCO1-201ENST00000397537 CRIP1P50238 77 aa3.91□□□□□ -1.78
SMCO1-201ENST00000397537 LINC00308Q8TCZ7 52 aa3.91□□□□□ -1.78
SMCO1-201ENST00000397537 PRCDQ00LT1 54 aa3.91□□□□□ -1.78
SMCO1-201ENST00000397537 SPAG11BQ08648 103 aa3.91□□□□□ -1.78
SMCO1-201ENST00000397537 SPAG11AQ6PDA7 123 aa3.91□□□□□ -1.78
SMCO1-201ENST00000397537 COX7B2Q8TF08 81 aa3.91□□□□□ -1.78
SMCO1-201ENST00000397537 NDUFA1O15239 70 aa3.9□□□□□ -1.79
SMCO1-201ENST00000397537 HRES1P13985 223 aa3.9□□□□□ -1.79
SMCO1-201ENST00000397537 LYSTQ99698 3801 aa3.89□□□□□ -1.79
SMCO1-201ENST00000397537 PRB2P02812 416 aaPredicted RBP3.89□□□□□ -1.79
SMCO1-201ENST00000397537 CNBPP62633 177 aaKnown RBP3.89□□□□□ -1.79
SMCO1-201ENST00000397537 WFDC10AQ9H1F0 79 aa3.89□□□□□ -1.79
SMCO1-201ENST00000397537 PLAC8Q9NZF1 115 aa3.89□□□□□ -1.79
SMCO1-201ENST00000397537 DSCR10P59022 87 aa3.88□□□□□ -1.79
SMCO1-201ENST00000397537 HERC1Q15751 4861 aa3.88□□□□□ -1.79
SMCO1-201ENST00000397537 DNAH3Q8TD57 4116 aa3.87□□□□□ -1.79
SMCO1-201ENST00000397537 GAS8-AS1O95177 125 aa3.87□□□□□ -1.79
SMCO1-201ENST00000397537 IGKV3-15P01624 115 aa3.87□□□□□ -1.79
SMCO1-201ENST00000397537 TTTY12Q9BZ98 90 aa3.87□□□□□ -1.79
SMCO1-201ENST00000397537 NDUFA4O00483 81 aa3.86□□□□□ -1.79
SMCO1-201ENST00000397537 Q6ZTI0 123 aa3.86□□□□□ -1.79
SMCO1-201ENST00000397537 PLCE1Q9P212 2302 aa3.86□□□□□ -1.79
SMCO1-201ENST00000397537 IGKV2-29A2NJV5 120 aaPredicted RBP3.86□□□□□ -1.79
SMCO1-201ENST00000397537 H0Y9P7 68 aa3.86□□□□□ -1.79
SMCO1-201ENST00000397537 C1orf137Q5JT78 98 aa3.85□□□□□ -1.79
SMCO1-201ENST00000397537 GAFA1Q96PS6 74 aa3.85□□□□□ -1.79
SMCO1-201ENST00000397537 ETDCA0A1B0GVM5 59 aa3.84□□□□□ -1.79
SMCO1-201ENST00000397537 LY6EQ16553 131 aa3.84□□□□□ -1.79
SMCO1-201ENST00000397537 IGKV1-17P01599 117 aa3.84□□□□□ -1.8
SMCO1-201ENST00000397537 PRR34Q9NV39 138 aa3.84□□□□□ -1.8
SMCO1-201ENST00000397537 IGKV4-1P06312 121 aa3.83□□□□□ -1.8
SMCO1-201ENST00000397537 FRAS1Q86XX4 4008 aa3.82□□□□□ -1.8
SMCO1-201ENST00000397537 DNAH7Q8WXX0 4024 aa3.82□□□□□ -1.8
SMCO1-201ENST00000397537 TRGV2A0A075B6R0 118 aa3.82□□□□□ -1.8
SMCO1-201ENST00000397537 CSMD3Q7Z407 3707 aa3.82□□□□□ -1.8
SMCO1-201ENST00000397537 POLR2KP53803 58 aaKnown RBP3.81□□□□□ -1.8
SMCO1-201ENST00000397537 SMIM11BQ8TCY0 68 aa3.81□□□□□ -1.8
SMCO1-201ENST00000397537 HECTD4Q9Y4D8 3996 aa3.81□□□□□ -1.8
SMCO1-201ENST00000397537 A0A0G2JQZ4 141 aa3.81□□□□□ -1.8
SMCO1-201ENST00000397537 MGPP08493 103 aa3.81□□□□□ -1.8
SMCO1-201ENST00000397537 SPINK7P58062 85 aa3.81□□□□□ -1.8
SMCO1-201ENST00000397537 DEFB134Q4QY38 66 aa3.81□□□□□ -1.8
SMCO1-201ENST00000397537 KCNQ1DNQ9H478 68 aa3.81□□□□□ -1.8
SMCO1-201ENST00000397537 TPRXLQ17RH7 258 aa3.8□□□□□ -1.8
SMCO1-201ENST00000397537 DEFB112Q30KQ8 113 aa3.8□□□□□ -1.8
SMCO1-201ENST00000397537 DMAC1Q96GE9 116 aa3.8□□□□□ -1.8
SMCO1-201ENST00000397537 H3BRN7 92 aa3.79□□□□□ -1.8
SMCO1-201ENST00000397537 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
SMCO1-201ENST00000397537 COA5Q86WW8 74 aa3.79□□□□□ -1.8
SMCO1-201ENST00000397537 PLECQ15149 4684 aaKnown RBP3.79□□□□□ -1.8
SMCO1-201ENST00000397537 IGLV4-60A0A075B6I1 120 aa3.78□□□□□ -1.8
SMCO1-201ENST00000397537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.78□□□□□ -1.8
SMCO1-201ENST00000397537 TRGV4A0A0C4DH28 118 aa3.78□□□□□ -1.8
SMCO1-201ENST00000397537 UQCR11O14957 56 aa3.78□□□□□ -1.8
SMCO1-201ENST00000397537 Q8N9L7 120 aa3.78□□□□□ -1.8
SMCO1-201ENST00000397537 SPACA4Q8TDM5 124 aa3.78□□□□□ -1.8
SMCO1-201ENST00000397537 RPL39LQ96EH5 51 aaKnown RBP3.78□□□□□ -1.8
SMCO1-201ENST00000397537 NUPR2A6NF83 97 aa3.77□□□□□ -1.81
SMCO1-201ENST00000397537 H0YGG7 62 aa3.77□□□□□ -1.81
SMCO1-201ENST00000397537 KRTAP10-3P60369 221 aa3.77□□□□□ -1.81
SMCO1-201ENST00000397537 RPL39P62891 51 aaKnown RBP3.77□□□□□ -1.81
SMCO1-201ENST00000397537 SPATA8Q6RVD6 105 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms