RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 FLNBO75369 2602 aaKnown RBP10.36□□□□□ -0.75
MCF2L-208ENST00000397030 BPTFQ12830 3046 aa10.35□□□□□ -0.75
MCF2L-208ENST00000397030 PRAC1Q96KF2 57 aa10.34□□□□□ -0.75
MCF2L-208ENST00000397030 MKI67P46013 3256 aaKnown RBP10.34□□□□□ -0.75
MCF2L-208ENST00000397030 FP248Q71RG6 208 aaPredicted RBP10.33□□□□□ -0.76
MCF2L-208ENST00000397030 Q75L30 129 aa10.31□□□□□ -0.76
MCF2L-208ENST00000397030 SPRR1AP35321 89 aa10.31□□□□□ -0.76
MCF2L-208ENST00000397030 H3BS24 57 aa10.3□□□□□ -0.76
MCF2L-208ENST00000397030 PANO1I0J062 215 aa10.3□□□□□ -0.76
MCF2L-208ENST00000397030 CYSTM1Q9H1C7 97 aa10.3□□□□□ -0.76
MCF2L-208ENST00000397030 Q5XG85 94 aa10.29□□□□□ -0.76
MCF2L-208ENST00000397030 LINC00472Q9H8W2 130 aa10.29□□□□□ -0.76
MCF2L-208ENST00000397030 SPATA8Q6RVD6 105 aa10.28□□□□□ -0.76
MCF2L-208ENST00000397030 RPL37P61927 97 aaKnown RBP10.27□□□□□ -0.77
MCF2L-208ENST00000397030 KRTAP26-1Q6PEX3 210 aa10.26□□□□□ -0.77
MCF2L-208ENST00000397030 A0A0A0MQY5 61 aa10.26□□□□□ -0.77
MCF2L-208ENST00000397030 LINC01558Q9Y6Z2 57 aa10.25□□□□□ -0.77
MCF2L-208ENST00000397030 A0A087X002 238 aa10.24□□□□□ -0.77
MCF2L-208ENST00000397030 ROMO1P60602 79 aa10.23□□□□□ -0.77
MCF2L-208ENST00000397030 Q6ZR54 194 aa10.23□□□□□ -0.77
MCF2L-208ENST00000397030 BRCA2P51587 3418 aa10.21□□□□□ -0.77
MCF2L-208ENST00000397030 SPRR1BP22528 89 aa10.21□□□□□ -0.78
MCF2L-208ENST00000397030 FLNAP21333 2647 aaKnown RBP10.15□□□□□ -0.78
MCF2L-208ENST00000397030 ITPR3Q14573 2671 aa10.13□□□□□ -0.79
MCF2L-208ENST00000397030 C20orf166-AS1Q96NR2 134 aa10.12□□□□□ -0.79
MCF2L-208ENST00000397030 A8MUU9 505 aa10.07□□□□□ -0.8
MCF2L-208ENST00000397030 HELZ2Q9BYK8 2649 aaKnown RBP10.06□□□□□ -0.8
MCF2L-208ENST00000397030 CELSR3Q9NYQ7 3312 aa10.05□□□□□ -0.8
MCF2L-208ENST00000397030 Q5VV11 94 aa10.05□□□□□ -0.8
MCF2L-208ENST00000397030 ATRQ13535 2644 aa10.04□□□□□ -0.8
MCF2L-208ENST00000397030 LAMA3Q16787 3333 aa10.03□□□□□ -0.8
MCF2L-208ENST00000397030 DNAH14Q0VDD8 3507 aa10.02□□□□□ -0.8
MCF2L-208ENST00000397030 SZT2Q5T011 3432 aa10.02□□□□□ -0.81
MCF2L-208ENST00000397030 MAST4O15021 2626 aa10.01□□□□□ -0.81
MCF2L-208ENST00000397030 CDH23Q9H251 3354 aa10□□□□□ -0.81
MCF2L-208ENST00000397030 NOTCH2NLQ7Z3S9 236 aa9.97□□□□□ -0.81
MCF2L-208ENST00000397030 PRUNE2Q8WUY3 3088 aa9.95□□□□□ -0.82
MCF2L-208ENST00000397030 CFAP54Q96N23 3096 aa9.91□□□□□ -0.82
MCF2L-208ENST00000397030 KRTAP11-1Q8IUC1 163 aa9.91□□□□□ -0.82
MCF2L-208ENST00000397030 A0A1B0GVY2 172 aa9.9□□□□□ -0.83
MCF2L-208ENST00000397030 CFAP46Q8IYW2 2715 aa9.89□□□□□ -0.83
MCF2L-208ENST00000397030 FLG2Q5D862 2391 aaPredicted RBP9.89□□□□□ -0.83
MCF2L-208ENST00000397030 A8MU10 97 aa9.88□□□□□ -0.83
MCF2L-208ENST00000397030 PRRC2CQ9Y520 2896 aaKnown RBP9.87□□□□□ -0.83
MCF2L-208ENST00000397030 UNC80Q8N2C7 3258 aa9.85□□□□□ -0.83
MCF2L-208ENST00000397030 LAMA2P24043 3122 aaKnown RBP9.84□□□□□ -0.83
MCF2L-208ENST00000397030 KRTAP4-16G5E9R7 235 aaPredicted RBP9.81□□□□□ -0.84
MCF2L-208ENST00000397030 Q6ZRN7 208 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-208ENST00000397030 KRTAP13-2Q52LG2 175 aa9.79□□□□□ -0.84
MCF2L-208ENST00000397030 RANBP2P49792 3224 aaKnown RBP9.78□□□□□ -0.84
MCF2L-208ENST00000397030 STAB1Q9NY15 2570 aa9.77□□□□□ -0.84
MCF2L-208ENST00000397030 TRIOO75962 3097 aa9.77□□□□□ -0.85
MCF2L-208ENST00000397030 RPS29P62273 56 aaKnown RBP9.76□□□□□ -0.85
MCF2L-208ENST00000397030 CHD7Q9P2D1 2997 aa9.72□□□□□ -0.85
MCF2L-208ENST00000397030 KRTAP10-8P60410 259 aa9.72□□□□□ -0.85
MCF2L-208ENST00000397030 TNP1P09430 55 aa9.71□□□□□ -0.85
MCF2L-208ENST00000397030 FREM2Q5SZK8 3169 aa9.7□□□□□ -0.86
MCF2L-208ENST00000397030 TEX15Q9BXT5 2789 aa9.7□□□□□ -0.86
MCF2L-208ENST00000397030 A0A0C4DFX4 3053 aa9.7□□□□□ -0.86
MCF2L-208ENST00000397030 KRTAP29-1A8MX34 341 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-208ENST00000397030 C10orf95Q9H7T3 257 aa9.68□□□□□ -0.86
MCF2L-208ENST00000397030 TEP1Q99973 2627 aaKnown RBP9.64□□□□□ -0.87
MCF2L-208ENST00000397030 COL6A3P12111 3177 aa9.64□□□□□ -0.87
MCF2L-208ENST00000397030 ASB16-AS1Q495Z4 193 aa9.62□□□□□ -0.87
MCF2L-208ENST00000397030 KRTAP21-3Q3LHN1 58 aa9.61□□□□□ -0.87
MCF2L-208ENST00000397030 NBEAL1Q6ZS30 2694 aa9.61□□□□□ -0.87
MCF2L-208ENST00000397030 BAHCC1Q9P281 2608 aa9.6□□□□□ -0.87
MCF2L-208ENST00000397030 SETXQ7Z333 2677 aaKnown RBP9.6□□□□□ -0.87
MCF2L-208ENST00000397030 HTTP42858 3142 aa9.59□□□□□ -0.88
MCF2L-208ENST00000397030 KRTAP7-1Q8IUC3 87 aa9.58□□□□□ -0.88
MCF2L-208ENST00000397030 DMBT1Q9UGM3 2413 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-208ENST00000397030 KRTAP10-10P60014 251 aa9.55□□□□□ -0.88
MCF2L-208ENST00000397030 VPS13AQ96RL7 3174 aa9.54□□□□□ -0.88
MCF2L-208ENST00000397030 REV3LO60673 3130 aa9.53□□□□□ -0.88
MCF2L-208ENST00000397030 WDFY4Q6ZS81 3184 aa9.52□□□□□ -0.89
MCF2L-208ENST00000397030 CHD6Q8TD26 2715 aa9.52□□□□□ -0.89
MCF2L-208ENST00000397030 USP34Q70CQ2 3546 aa9.5□□□□□ -0.89
MCF2L-208ENST00000397030 KRTAP25-1Q3LHN0 102 aa9.49□□□□□ -0.89
MCF2L-208ENST00000397030 VCANP13611 3396 aa9.48□□□□□ -0.89
MCF2L-208ENST00000397030 AKAP13Q12802 2813 aa9.48□□□□□ -0.89
MCF2L-208ENST00000397030 SPEGQ15772 3267 aa9.45□□□□□ -0.9
MCF2L-208ENST00000397030 MGAQ8IWI9 3026 aa9.45□□□□□ -0.9
MCF2L-208ENST00000397030 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
MCF2L-208ENST00000397030 KRTAP16-1A8MUX0 517 aa9.44□□□□□ -0.9
MCF2L-208ENST00000397030 XP32Q5T750 250 aa9.43□□□□□ -0.9
MCF2L-208ENST00000397030 A6NN06 94 aa9.42□□□□□ -0.9
MCF2L-208ENST00000397030 SPTBN5Q9NRC6 3674 aaKnown RBP9.41□□□□□ -0.9
MCF2L-208ENST00000397030 CFAP47Q6ZTR5 3102 aa9.4□□□□□ -0.9
MCF2L-208ENST00000397030 UNC79Q9P2D8 2635 aa9.4□□□□□ -0.91
MCF2L-208ENST00000397030 COL6A5A8TX70 2615 aa9.38□□□□□ -0.91
MCF2L-208ENST00000397030 CENPEQ02224 2701 aa9.37□□□□□ -0.91
MCF2L-208ENST00000397030 MYO15AQ9UKN7 3530 aa9.36□□□□□ -0.91
MCF2L-208ENST00000397030 NDUFAF8A1L188 74 aa9.35□□□□□ -0.91
MCF2L-208ENST00000397030 EYSQ5T1H1 3165 aa9.33□□□□□ -0.92
MCF2L-208ENST00000397030 STAB2Q8WWQ8 2551 aa9.31□□□□□ -0.92
MCF2L-208ENST00000397030 PRO2289Q9P1D8 64 aa9.3□□□□□ -0.92
MCF2L-208ENST00000397030 LAMA1P25391 3075 aa9.27□□□□□ -0.93
MCF2L-208ENST00000397030 FRYQ5TBA9 3013 aa9.27□□□□□ -0.93
MCF2L-208ENST00000397030 GCN1Q92616 2671 aaKnown RBP9.26□□□□□ -0.93
MCF2L-208ENST00000397030 CRYBG3Q68DQ2 2970 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms