RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 LINC00483Q53H64 154 aa12.3□□□□□ -0.44
VCPKMT-202ENST00000395860 FAM229AH3BQW9 127 aa12.28□□□□□ -0.44
VCPKMT-202ENST00000395860 VPS13BQ7Z7G8 4022 aa12.27□□□□□ -0.44
VCPKMT-202ENST00000395860 DSCR8Q96T75 97 aa12.27□□□□□ -0.45
VCPKMT-202ENST00000395860 PLA2G1BP04054 148 aaKnown RBP12.26□□□□□ -0.45
VCPKMT-202ENST00000395860 SPINK6Q6UWN8 80 aa12.26□□□□□ -0.45
VCPKMT-202ENST00000395860 KRTAP10-4P60372 401 aaPredicted RBP12.25□□□□□ -0.45
VCPKMT-202ENST00000395860 ANAPC11Q9NYG5 84 aa12.25□□□□□ -0.45
VCPKMT-202ENST00000395860 EPPK1P58107 5090 aaKnown RBP12.24□□□□□ -0.45
VCPKMT-202ENST00000395860 J3QR89 54 aa12.23□□□□□ -0.45
VCPKMT-202ENST00000395860 TRBV7-4A0A0J9YYF1 115 aa12.22□□□□□ -0.45
VCPKMT-202ENST00000395860 LOC110117498A0A087WWA1 95 aa12.21□□□□□ -0.45
VCPKMT-202ENST00000395860 IGLV9-49A0A0B4J1Y8 123 aa12.2□□□□□ -0.46
VCPKMT-202ENST00000395860 Q5VSD8 79 aa12.2□□□□□ -0.46
VCPKMT-202ENST00000395860 K7ERU9 68 aa12.2□□□□□ -0.46
VCPKMT-202ENST00000395860 Q6ZQT0 140 aa12.2□□□□□ -0.46
VCPKMT-202ENST00000395860 IGLV8-61A0A075B6I0 122 aa12.19□□□□□ -0.46
VCPKMT-202ENST00000395860 PDE6GP18545 87 aa12.19□□□□□ -0.46
VCPKMT-202ENST00000395860 C9orf153Q5TBE3 101 aa12.18□□□□□ -0.46
VCPKMT-202ENST00000395860 CCKP06307 115 aa12.18□□□□□ -0.46
VCPKMT-202ENST00000395860 HSPG2P98160 4391 aa12.15□□□□□ -0.46
VCPKMT-202ENST00000395860 KRTAP1-4P0C5Y4 121 aa12.15□□□□□ -0.46
VCPKMT-202ENST00000395860 VPS25Q9BRG1 176 aa12.15□□□□□ -0.46
VCPKMT-202ENST00000395860 FAT1Q14517 4588 aa12.15□□□□□ -0.46
VCPKMT-202ENST00000395860 IGFL1Q6UW32 110 aa12.15□□□□□ -0.46
VCPKMT-202ENST00000395860 RYR1P21817 5038 aa12.15□□□□□ -0.47
VCPKMT-202ENST00000395860 FAM229BQ4G0N7 80 aa12.14□□□□□ -0.47
VCPKMT-202ENST00000395860 Q6JHZ5 121 aa12.14□□□□□ -0.47
VCPKMT-202ENST00000395860 MOBPQ13875 183 aa12.13□□□□□ -0.47
VCPKMT-202ENST00000395860 C21orf62-AS1Q17RA5 79 aa12.13□□□□□ -0.47
VCPKMT-202ENST00000395860 Q8NBF4 154 aa12.13□□□□□ -0.47
VCPKMT-202ENST00000395860 A0A0G2JQZ4 141 aa12.12□□□□□ -0.47
VCPKMT-202ENST00000395860 Q8N1X5 172 aa12.11□□□□□ -0.47
VCPKMT-202ENST00000395860 A0A087X002 238 aa12.1□□□□□ -0.47
VCPKMT-202ENST00000395860 CRYGAP11844 174 aa12.1□□□□□ -0.47
VCPKMT-202ENST00000395860 KRTAP17-1Q9BYP8 105 aa12.09□□□□□ -0.47
VCPKMT-202ENST00000395860 FAM240AA0A1B0GVK7 77 aa12.08□□□□□ -0.48
VCPKMT-202ENST00000395860 A0A1W2PNM2 257 aa12.08□□□□□ -0.48
VCPKMT-202ENST00000395860 KIAA1109Q2LD37 5005 aa12.08□□□□□ -0.48
VCPKMT-202ENST00000395860 ACYP1P07311 99 aa12.07□□□□□ -0.48
VCPKMT-202ENST00000395860 KRTAP13-2Q52LG2 175 aa12.06□□□□□ -0.48
VCPKMT-202ENST00000395860 SSBP3-AS1Q7Z2R9 100 aa12.05□□□□□ -0.48
VCPKMT-202ENST00000395860 LINC00846Q9NV44 126 aa12□□□□□ -0.49
VCPKMT-202ENST00000395860 A0A1B0GW54 56 aa12□□□□□ -0.49
VCPKMT-202ENST00000395860 Q6Q795 121 aa12□□□□□ -0.49
VCPKMT-202ENST00000395860 PRR26Q8N8Z3 221 aa12□□□□□ -0.49
VCPKMT-202ENST00000395860 TYMSOSQ8TAI1 123 aa11.99□□□□□ -0.49
VCPKMT-202ENST00000395860 PKHD1L1Q86WI1 4243 aa11.99□□□□□ -0.49
VCPKMT-202ENST00000395860 HRCT1Q6UXD1 115 aa11.98□□□□□ -0.49
VCPKMT-202ENST00000395860 A0A087WSZ3 146 aa11.95□□□□□ -0.5
VCPKMT-202ENST00000395860 CDIP1Q9H305 208 aa11.95□□□□□ -0.5
VCPKMT-202ENST00000395860 TRBV7-7A0A0K0K1E9 115 aa11.94□□□□□ -0.5
VCPKMT-202ENST00000395860 UBL5Q9BZL1 73 aa11.94□□□□□ -0.5
VCPKMT-202ENST00000395860 CD164Q04900 197 aa11.92□□□□□ -0.5
VCPKMT-202ENST00000395860 Q6ZVQ6 151 aa11.9□□□□□ -0.51
VCPKMT-202ENST00000395860 NREPQ16612 68 aa11.89□□□□□ -0.51
VCPKMT-202ENST00000395860 BIRC6Q9NR09 4857 aa11.88□□□□□ -0.51
VCPKMT-202ENST00000395860 C4orf48Q5BLP8 95 aa11.87□□□□□ -0.51
VCPKMT-202ENST00000395860 LINC00643Q86TS7 51 aa11.85□□□□□ -0.51
VCPKMT-202ENST00000395860 KRTAP4-5Q9BYR2 181 aa11.85□□□□□ -0.51
VCPKMT-202ENST00000395860 LINC00304Q8N9R0 145 aa11.84□□□□□ -0.51
VCPKMT-202ENST00000395860 SS18L2Q9UHA2 77 aa11.84□□□□□ -0.51
VCPKMT-202ENST00000395860 SPAG11AQ6PDA7 123 aa11.8□□□□□ -0.52
VCPKMT-202ENST00000395860 SPINK1P00995 79 aa11.79□□□□□ -0.52
VCPKMT-202ENST00000395860 KRTAP10-8P60410 259 aa11.77□□□□□ -0.52
VCPKMT-202ENST00000395860 IGKV3D-7A0A0C4DH55 119 aa11.77□□□□□ -0.53
VCPKMT-202ENST00000395860 LIMD2Q9BT23 127 aa11.77□□□□□ -0.53
VCPKMT-202ENST00000395860 ATP5EP2Q5VTU8 51 aa11.76□□□□□ -0.53
VCPKMT-202ENST00000395860 BPY2O14599 106 aa11.75□□□□□ -0.53
VCPKMT-202ENST00000395860 MT-ATP8P03928 68 aa11.75□□□□□ -0.53
VCPKMT-202ENST00000395860 DEFB116Q30KQ4 102 aa11.74□□□□□ -0.53
VCPKMT-202ENST00000395860 LINC00472Q9H8W2 130 aa11.74□□□□□ -0.53
VCPKMT-202ENST00000395860 Q5XG85 94 aa11.74□□□□□ -0.53
VCPKMT-202ENST00000395860 RPS29P62273 56 aaKnown RBP11.73□□□□□ -0.53
VCPKMT-202ENST00000395860 SIGMAR1Q99720 223 aa11.73□□□□□ -0.53
VCPKMT-202ENST00000395860 CXCL6P80162 114 aa11.72□□□□□ -0.53
VCPKMT-202ENST00000395860 FLG2Q5D862 2391 aaPredicted RBP11.72□□□□□ -0.53
VCPKMT-202ENST00000395860 ASB16-AS1Q495Z4 193 aa11.72□□□□□ -0.53
VCPKMT-202ENST00000395860 Q96NJ1 140 aa11.72□□□□□ -0.53
VCPKMT-202ENST00000395860 OXTP01178 125 aa11.71□□□□□ -0.54
VCPKMT-202ENST00000395860 LRP1Q07954 4544 aaKnown RBP11.71□□□□□ -0.54
VCPKMT-202ENST00000395860 HERC2O95714 4834 aa11.68□□□□□ -0.54
VCPKMT-202ENST00000395860 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
VCPKMT-202ENST00000395860 IGKV4-1P06312 121 aa11.67□□□□□ -0.54
VCPKMT-202ENST00000395860 J3KT08 172 aa11.67□□□□□ -0.54
VCPKMT-202ENST00000395860 MT1HL1P0DM35 61 aa11.67□□□□□ -0.54
VCPKMT-202ENST00000395860 DSCR10P59022 87 aa11.65□□□□□ -0.54
VCPKMT-202ENST00000395860 HIST1H4AP62805 103 aaKnown RBP11.64□□□□□ -0.55
VCPKMT-202ENST00000395860 C1orf195Q5TG92 126 aa11.64□□□□□ -0.55
VCPKMT-202ENST00000395860 Q8N9L7 120 aa11.62□□□□□ -0.55
VCPKMT-202ENST00000395860 TNXBP22105 4242 aa11.62□□□□□ -0.55
VCPKMT-202ENST00000395860 KRTAP29-1A8MX34 341 aaPredicted RBP11.62□□□□□ -0.55
VCPKMT-202ENST00000395860 IMUPQ9GZP8 106 aa11.62□□□□□ -0.55
VCPKMT-202ENST00000395860 A8MWP4 228 aa11.59□□□□□ -0.55
VCPKMT-202ENST00000395860 K7EQZ3 153 aa11.59□□□□□ -0.55
VCPKMT-202ENST00000395860 MYCBP2O75592 4640 aa11.59□□□□□ -0.55
VCPKMT-202ENST00000395860 NDUFB1O75438 58 aa11.58□□□□□ -0.56
VCPKMT-202ENST00000395860 A0A087WVE0 104 aa11.56□□□□□ -0.56
VCPKMT-202ENST00000395860 PRR15Q8IV56 129 aa11.54□□□□□ -0.56
VCPKMT-202ENST00000395860 ABCA13Q86UQ4 5058 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms