RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 UBR4Q5T4S7 5183 aa11.38□□□□□ -0.59
SNCA-203ENST00000394986 LPAP08519 4548 aa11.38□□□□□ -0.59
SNCA-203ENST00000394986 A0A0G2JQZ4 141 aa11.35□□□□□ -0.59
SNCA-203ENST00000394986 HRCT1Q6UXD1 115 aa11.35□□□□□ -0.59
SNCA-203ENST00000394986 TSTD3H0UI37 97 aa11.35□□□□□ -0.59
SNCA-203ENST00000394986 PSMB2P49721 201 aa11.35□□□□□ -0.59
SNCA-203ENST00000394986 CLEC2BQ92478 149 aa11.35□□□□□ -0.59
SNCA-203ENST00000394986 M0R143 59 aa11.32□□□□□ -0.6
SNCA-203ENST00000394986 F8WEM9 126 aa11.3□□□□□ -0.6
SNCA-203ENST00000394986 SNCGO76070 127 aa11.3□□□□□ -0.6
SNCA-203ENST00000394986 RPS29P62273 56 aaKnown RBP11.3□□□□□ -0.6
SNCA-203ENST00000394986 A0A1B0GX51 115 aa11.27□□□□□ -0.6
SNCA-203ENST00000394986 PPDPFLQ8WWR9 84 aa11.27□□□□□ -0.6
SNCA-203ENST00000394986 IGLV7-46A0A075B6I9 117 aa11.26□□□□□ -0.61
SNCA-203ENST00000394986 COX6CP09669 75 aa11.26□□□□□ -0.61
SNCA-203ENST00000394986 SNHG12Q9BXW3 62 aa11.26□□□□□ -0.61
SNCA-203ENST00000394986 OCIAD2Q56VL3 154 aa11.26□□□□□ -0.61
SNCA-203ENST00000394986 IGLV8-61A0A075B6I0 122 aa11.23□□□□□ -0.61
SNCA-203ENST00000394986 H3BUT2 72 aa11.23□□□□□ -0.61
SNCA-203ENST00000394986 CD164Q04900 197 aa11.23□□□□□ -0.61
SNCA-203ENST00000394986 BATFQ16520 125 aa11.23□□□□□ -0.61
SNCA-203ENST00000394986 NAA38Q9BRA0 125 aaKnown RBP11.23□□□□□ -0.61
SNCA-203ENST00000394986 SCGB1C2P0DMR2 95 aa11.22□□□□□ -0.61
SNCA-203ENST00000394986 IGFL1Q6UW32 110 aa11.21□□□□□ -0.61
SNCA-203ENST00000394986 FP248Q71RG6 208 aaPredicted RBP11.21□□□□□ -0.61
SNCA-203ENST00000394986 LIMD2Q9BT23 127 aa11.21□□□□□ -0.61
SNCA-203ENST00000394986 DNAL4O96015 105 aa11.2□□□□□ -0.62
SNCA-203ENST00000394986 FABP2P12104 132 aa11.2□□□□□ -0.62
SNCA-203ENST00000394986 Q6JHZ5 121 aa11.19□□□□□ -0.62
SNCA-203ENST00000394986 NDUFV3P56181 108 aaKnown RBP11.18□□□□□ -0.62
SNCA-203ENST00000394986 LST1O00453 97 aa11.17□□□□□ -0.62
SNCA-203ENST00000394986 TPRXLQ17RH7 258 aa11.17□□□□□ -0.62
SNCA-203ENST00000394986 ORMDL1Q9P0S3 153 aa11.17□□□□□ -0.62
SNCA-203ENST00000394986 GHRHP01286 108 aa11.14□□□□□ -0.63
SNCA-203ENST00000394986 H3BMG7 143 aa11.13□□□□□ -0.63
SNCA-203ENST00000394986 TRACP01848 142 aa11.13□□□□□ -0.63
SNCA-203ENST00000394986 A0A1B0GV72 72 aa11.12□□□□□ -0.63
SNCA-203ENST00000394986 KRTAP13-3Q3SY46 172 aa11.11□□□□□ -0.63
SNCA-203ENST00000394986 Q5XG85 94 aa11.11□□□□□ -0.63
SNCA-203ENST00000394986 CDIP1Q9H305 208 aa11.11□□□□□ -0.63
SNCA-203ENST00000394986 KRTAP3-3Q9BYR6 98 aa11.1□□□□□ -0.63
SNCA-203ENST00000394986 KRTAP3-2Q9BYR7 98 aa11.1□□□□□ -0.63
SNCA-203ENST00000394986 TRBV7-7A0A0K0K1E9 115 aa11.09□□□□□ -0.63
SNCA-203ENST00000394986 TCL1BO95988 128 aa11.09□□□□□ -0.63
SNCA-203ENST00000394986 TMEM256-PLSCR3K7ERE1 68 aa11.08□□□□□ -0.64
SNCA-203ENST00000394986 C1orf195Q5TG92 126 aa11.08□□□□□ -0.64
SNCA-203ENST00000394986 RNF213Q63HN8 5207 aa11.07□□□□□ -0.64
SNCA-203ENST00000394986 H3BQ85 93 aa11.06□□□□□ -0.64
SNCA-203ENST00000394986 TAX1BP3O14907 124 aa11.05□□□□□ -0.64
SNCA-203ENST00000394986 ATXN8Q156A1 80 aa11.05□□□□□ -0.64
SNCA-203ENST00000394986 UBE2V1Q13404 147 aa11.03□□□□□ -0.64
SNCA-203ENST00000394986 BAALC-AS2P0C853 105 aa11.01□□□□□ -0.65
SNCA-203ENST00000394986 Q6Q795 121 aa11.01□□□□□ -0.65
SNCA-203ENST00000394986 TEN1Q86WV5 123 aa11.01□□□□□ -0.65
SNCA-203ENST00000394986 A0A1W2PNM2 257 aa11.01□□□□□ -0.65
SNCA-203ENST00000394986 C9orf118A6NHY6 69 aa11.01□□□□□ -0.65
SNCA-203ENST00000394986 LYRM7Q5U5X0 104 aa11.01□□□□□ -0.65
SNCA-203ENST00000394986 ANKRD29Q8N6D5 301 aa11□□□□□ -0.65
SNCA-203ENST00000394986 A0A087WSZ3 146 aa10.98□□□□□ -0.65
SNCA-203ENST00000394986 C9orf92A6NGG3 77 aa10.98□□□□□ -0.65
SNCA-203ENST00000394986 ASB16-AS1Q495Z4 193 aa10.98□□□□□ -0.65
SNCA-203ENST00000394986 MUC17Q685J3 4493 aa10.96□□□□□ -0.66
SNCA-203ENST00000394986 TRBV20-1A0A075B6N2 111 aa10.95□□□□□ -0.66
SNCA-203ENST00000394986 A0A1W2PPM0 123 aa10.95□□□□□ -0.66
SNCA-203ENST00000394986 PCP4L1A6NKN8 68 aa10.94□□□□□ -0.66
SNCA-203ENST00000394986 XP32Q5T750 250 aa10.93□□□□□ -0.66
SNCA-203ENST00000394986 C9JAW5 83 aa10.92□□□□□ -0.66
SNCA-203ENST00000394986 RBM3P98179 157 aaKnown RBP10.92□□□□□ -0.66
SNCA-203ENST00000394986 SS18L2Q9UHA2 77 aa10.92□□□□□ -0.66
SNCA-203ENST00000394986 TRBV7-4A0A0J9YYF1 115 aa10.92□□□□□ -0.66
SNCA-203ENST00000394986 CCKP06307 115 aa10.92□□□□□ -0.66
SNCA-203ENST00000394986 MUC2Q02817 5179 aa10.89□□□□□ -0.67
SNCA-203ENST00000394986 COL5A1-AS1Q5SY13 56 aa10.89□□□□□ -0.67
SNCA-203ENST00000394986 DSCR8Q96T75 97 aa10.89□□□□□ -0.67
SNCA-203ENST00000394986 VPS25Q9BRG1 176 aa10.89□□□□□ -0.67
SNCA-203ENST00000394986 MTURNQ8N3F0 131 aa10.88□□□□□ -0.67
SNCA-203ENST00000394986 Q96NJ1 140 aa10.86□□□□□ -0.67
SNCA-203ENST00000394986 SPCS1Q9Y6A9 102 aa10.84□□□□□ -0.67
SNCA-203ENST00000394986 JMJD7-PLA2G4BH0Y9G9 81 aa10.82□□□□□ -0.68
SNCA-203ENST00000394986 C14orf132Q9NPU4 83 aa10.8□□□□□ -0.68
SNCA-203ENST00000394986 H3BT86 120 aa10.79□□□□□ -0.68
SNCA-203ENST00000394986 SEC61BP60468 96 aaKnown RBP10.79□□□□□ -0.68
SNCA-203ENST00000394986 Q6ZQT0 140 aa10.79□□□□□ -0.68
SNCA-203ENST00000394986 OBSCN-AS1Q96MR7 158 aa10.77□□□□□ -0.68
SNCA-203ENST00000394986 SIGMAR1Q99720 223 aa10.77□□□□□ -0.68
SNCA-203ENST00000394986 LOC110117498A0A087WWA1 95 aa10.76□□□□□ -0.69
SNCA-203ENST00000394986 DEFB116Q30KQ4 102 aa10.76□□□□□ -0.69
SNCA-203ENST00000394986 IGKV4-1P06312 121 aa10.74□□□□□ -0.69
SNCA-203ENST00000394986 KRTAP4-1Q9BYQ7 146 aa10.74□□□□□ -0.69
SNCA-203ENST00000394986 LINC00472Q9H8W2 130 aa10.74□□□□□ -0.69
SNCA-203ENST00000394986 K7EP34 96 aa10.72□□□□□ -0.69
SNCA-203ENST00000394986 PCOTHQ58A44 107 aa10.72□□□□□ -0.69
SNCA-203ENST00000394986 PDE6GP18545 87 aa10.71□□□□□ -0.69
SNCA-203ENST00000394986 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.69
SNCA-203ENST00000394986 RPL37P61927 97 aaKnown RBP10.71□□□□□ -0.69
SNCA-203ENST00000394986 DSCR10P59022 87 aa10.68□□□□□ -0.7
SNCA-203ENST00000394986 PRO0461Q9UI25 63 aa10.67□□□□□ -0.7
SNCA-203ENST00000394986 C21orf62-AS1Q17RA5 79 aa10.66□□□□□ -0.7
SNCA-203ENST00000394986 A0A1B0GW54 56 aa10.62□□□□□ -0.71
SNCA-203ENST00000394986 NOTCH2NLQ7Z3S9 236 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms