RNA–Protein interactions for RNA: ENST00000392025.5

SPTBN4-204, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-204ENST00000392025 SPINK7P58062 85 aa11.42□□□□□ -0.58
SPTBN4-204ENST00000392025 SETXQ7Z333 2677 aaKnown RBP11.42□□□□□ -0.58
SPTBN4-204ENST00000392025 FAM229BQ4G0N7 80 aa11.42□□□□□ -0.58
SPTBN4-204ENST00000392025 ZNF575Q86XF7 245 aa11.42□□□□□ -0.58
SPTBN4-204ENST00000392025 CFAP54Q96N23 3096 aa11.41□□□□□ -0.58
SPTBN4-204ENST00000392025 PRAC1Q96KF2 57 aa11.38□□□□□ -0.59
SPTBN4-204ENST00000392025 ROMO1P60602 79 aa11.37□□□□□ -0.59
SPTBN4-204ENST00000392025 LINC00612Q8N6U2 182 aa11.36□□□□□ -0.59
SPTBN4-204ENST00000392025 BAHCC1Q9P281 2608 aa11.35□□□□□ -0.59
SPTBN4-204ENST00000392025 UTRNP46939 3433 aa11.33□□□□□ -0.6
SPTBN4-204ENST00000392025 ZNF292O60281 2723 aa11.3□□□□□ -0.6
SPTBN4-204ENST00000392025 A0A1W2PNN7 141 aa11.27□□□□□ -0.6
SPTBN4-204ENST00000392025 MAP1AP78559 2803 aaPredicted RBP11.27□□□□□ -0.6
SPTBN4-204ENST00000392025 ANAPC11Q9NYG5 84 aa11.27□□□□□ -0.6
SPTBN4-204ENST00000392025 LAMA2P24043 3122 aaKnown RBP11.26□□□□□ -0.61
SPTBN4-204ENST00000392025 APCP25054 2843 aa11.24□□□□□ -0.61
SPTBN4-204ENST00000392025 RPL37P61927 97 aaKnown RBP11.23□□□□□ -0.61
SPTBN4-204ENST00000392025 S4R3F8 94 aa11.23□□□□□ -0.61
SPTBN4-204ENST00000392025 GIG44P09565 113 aaPredicted RBP11.22□□□□□ -0.61
SPTBN4-204ENST00000392025 A0A0G2JQZ4 141 aa11.2□□□□□ -0.62
SPTBN4-204ENST00000392025 SEC61BP60468 96 aaKnown RBP11.17□□□□□ -0.62
SPTBN4-204ENST00000392025 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.16□□□□□ -0.62
SPTBN4-204ENST00000392025 ZCCHC13Q8WW36 166 aaKnown RBP11.14□□□□□ -0.63
SPTBN4-204ENST00000392025 MMP24-AS1A0A0U1RRL7 71 aa11.13□□□□□ -0.63
SPTBN4-204ENST00000392025 A0A0C4DFX4 3053 aa11.13□□□□□ -0.63
SPTBN4-204ENST00000392025 CASC10Q5T4H9 136 aa11.13□□□□□ -0.63
SPTBN4-204ENST00000392025 A0A096LNT2 108 aa11.12□□□□□ -0.63
SPTBN4-204ENST00000392025 CYSTM1Q9H1C7 97 aa11.1□□□□□ -0.63
SPTBN4-204ENST00000392025 R4GN34 69 aa11.1□□□□□ -0.63
SPTBN4-204ENST00000392025 KRTAP10-3P60369 221 aa11.07□□□□□ -0.64
SPTBN4-204ENST00000392025 Q5W150 140 aa11.04□□□□□ -0.64
SPTBN4-204ENST00000392025 H1FX-AS1Q4G0G2 97 aa11.03□□□□□ -0.64
SPTBN4-204ENST00000392025 LINC00472Q9H8W2 130 aa10.99□□□□□ -0.65
SPTBN4-204ENST00000392025 MGAQ8IWI9 3026 aa10.99□□□□□ -0.65
SPTBN4-204ENST00000392025 PLAC8Q9NZF1 115 aa10.99□□□□□ -0.65
SPTBN4-204ENST00000392025 NSD1Q96L73 2696 aaPredicted RBP10.98□□□□□ -0.65
SPTBN4-204ENST00000392025 IGSF10Q6WRI0 2623 aa10.98□□□□□ -0.65
SPTBN4-204ENST00000392025 A0A087X002 238 aa10.97□□□□□ -0.65
SPTBN4-204ENST00000392025 OXTP01178 125 aa10.97□□□□□ -0.65
SPTBN4-204ENST00000392025 SPATA8Q6RVD6 105 aa10.95□□□□□ -0.66
SPTBN4-204ENST00000392025 Q6ZR54 194 aa10.95□□□□□ -0.66
SPTBN4-204ENST00000392025 PLAC4Q8WY50 150 aa10.94□□□□□ -0.66
SPTBN4-204ENST00000392025 UTP20O75691 2785 aaKnown RBP10.92□□□□□ -0.66
SPTBN4-204ENST00000392025 SPRR1AP35321 89 aa10.92□□□□□ -0.66
SPTBN4-204ENST00000392025 KRTAP25-1Q3LHN0 102 aa10.92□□□□□ -0.66
SPTBN4-204ENST00000392025 VPS13AQ96RL7 3174 aa10.91□□□□□ -0.66
SPTBN4-204ENST00000392025 SPRR1BP22528 89 aa10.88□□□□□ -0.67
SPTBN4-204ENST00000392025 A6NN06 94 aa10.88□□□□□ -0.67
SPTBN4-204ENST00000392025 NBEAL2Q6ZNJ1 2754 aa10.87□□□□□ -0.67
SPTBN4-204ENST00000392025 KRTAP1-3Q8IUG1 177 aa10.86□□□□□ -0.67
SPTBN4-204ENST00000392025 XIRP2A4UGR9 3374 aa10.85□□□□□ -0.67
SPTBN4-204ENST00000392025 TRANK1O15050 2925 aa10.82□□□□□ -0.68
SPTBN4-204ENST00000392025 TRIOO75962 3097 aa10.81□□□□□ -0.68
SPTBN4-204ENST00000392025 FRYLO94915 3013 aa10.8□□□□□ -0.68
SPTBN4-204ENST00000392025 WDFY4Q6ZS81 3184 aa10.79□□□□□ -0.68
SPTBN4-204ENST00000392025 Q5VSD8 79 aa10.78□□□□□ -0.68
SPTBN4-204ENST00000392025 FRYQ5TBA9 3013 aa10.77□□□□□ -0.69
SPTBN4-204ENST00000392025 KRTAP1-1Q07627 177 aa10.76□□□□□ -0.69
SPTBN4-204ENST00000392025 M0QZ58 72 aa10.75□□□□□ -0.69
SPTBN4-204ENST00000392025 CHD7Q9P2D1 2997 aa10.73□□□□□ -0.69
SPTBN4-204ENST00000392025 NDUFAF8A1L188 74 aa10.73□□□□□ -0.69
SPTBN4-204ENST00000392025 DSPP15924 2871 aaKnown RBP10.72□□□□□ -0.69
SPTBN4-204ENST00000392025 PRUNE2Q8WUY3 3088 aa10.7□□□□□ -0.7
SPTBN4-204ENST00000392025 UBR5O95071 2799 aaPredicted RBP10.68□□□□□ -0.7
SPTBN4-204ENST00000392025 ITPR1Q14643 2758 aa10.68□□□□□ -0.7
SPTBN4-204ENST00000392025 MKI67P46013 3256 aaKnown RBP10.67□□□□□ -0.7
SPTBN4-204ENST00000392025 REV3LO60673 3130 aa10.67□□□□□ -0.7
SPTBN4-204ENST00000392025 PANO1I0J062 215 aa10.67□□□□□ -0.7
SPTBN4-204ENST00000392025 KRTAP26-1Q6PEX3 210 aa10.67□□□□□ -0.7
SPTBN4-204ENST00000392025 Q8NDZ9 215 aa10.62□□□□□ -0.71
SPTBN4-204ENST00000392025 C20orf166-AS1Q96NR2 134 aa10.61□□□□□ -0.71
SPTBN4-204ENST00000392025 CRYBG3Q68DQ2 2970 aa10.6□□□□□ -0.71
SPTBN4-204ENST00000392025 LCE6AA0A183 80 aa10.59□□□□□ -0.71
SPTBN4-204ENST00000392025 KALRNO60229 2985 aa10.58□□□□□ -0.72
SPTBN4-204ENST00000392025 ADM2Q7Z4H4 148 aa10.58□□□□□ -0.72
SPTBN4-204ENST00000392025 KRTAP29-1A8MX34 341 aaPredicted RBP10.57□□□□□ -0.72
SPTBN4-204ENST00000392025 CELSR3Q9NYQ7 3312 aa10.55□□□□□ -0.72
SPTBN4-204ENST00000392025 LRBAP50851 2863 aa10.5□□□□□ -0.73
SPTBN4-204ENST00000392025 FLNCQ14315 2725 aa10.49□□□□□ -0.73
SPTBN4-204ENST00000392025 ASH1LQ9NR48 2969 aaKnown RBP10.49□□□□□ -0.73
SPTBN4-204ENST00000392025 FREM2Q5SZK8 3169 aa10.48□□□□□ -0.73
SPTBN4-204ENST00000392025 TENM1Q9UKZ4 2725 aa10.46□□□□□ -0.73
SPTBN4-204ENST00000392025 RPS29P62273 56 aaKnown RBP10.46□□□□□ -0.73
SPTBN4-204ENST00000392025 RANBP2P49792 3224 aaKnown RBP10.42□□□□□ -0.74
SPTBN4-204ENST00000392025 PP632Q6XCG6 107 aa10.41□□□□□ -0.74
SPTBN4-204ENST00000392025 UNC80Q8N2C7 3258 aa10.4□□□□□ -0.74
SPTBN4-204ENST00000392025 USP34Q70CQ2 3546 aa10.39□□□□□ -0.75
SPTBN4-204ENST00000392025 KRTAP10-1P60331 282 aa10.39□□□□□ -0.75
SPTBN4-204ENST00000392025 CHD9Q3L8U1 2897 aa10.38□□□□□ -0.75
SPTBN4-204ENST00000392025 COL12A1Q99715 3063 aa10.37□□□□□ -0.75
SPTBN4-204ENST00000392025 LAMA3Q16787 3333 aa10.36□□□□□ -0.75
SPTBN4-204ENST00000392025 KRTAP4-16G5E9R7 235 aaPredicted RBP10.35□□□□□ -0.75
SPTBN4-204ENST00000392025 DMXL2Q8TDJ6 3036 aa10.34□□□□□ -0.75
SPTBN4-204ENST00000392025 NF1P21359 2839 aa10.34□□□□□ -0.75
SPTBN4-204ENST00000392025 A8MUU9 505 aa10.32□□□□□ -0.76
SPTBN4-204ENST00000392025 LAMA1P25391 3075 aa10.31□□□□□ -0.76
SPTBN4-204ENST00000392025 HIVEP1P15822 2718 aa10.31□□□□□ -0.76
SPTBN4-204ENST00000392025 KRTAP11-1Q8IUC1 163 aa10.3□□□□□ -0.76
SPTBN4-204ENST00000392025 KRTAP10-2P60368 255 aa10.29□□□□□ -0.76
SPTBN4-204ENST00000392025 KRTAP1-5Q9BYS1 174 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 731.7 ms