RNA–Protein interactions for RNA: ENST00000389858.4

LGR4-202, Transcript of leucine rich repeat containing G protein-coupled receptor 4, humanhuman

TSL 1 (best) BASIC

Gene LGR4, Length 5,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR4-202ENST00000389858 COL6A5A8TX70 2615 aa12.82□□□□□ -0.36
LGR4-202ENST00000389858 Q6ZSA8 131 aa12.82□□□□□ -0.36
LGR4-202ENST00000389858 Q8NDZ9 215 aa12.82□□□□□ -0.36
LGR4-202ENST00000389858 A0A0D9SG42 100 aa12.82□□□□□ -0.36
LGR4-202ENST00000389858 TRIOO75962 3097 aa12.76□□□□□ -0.37
LGR4-202ENST00000389858 CDC42SE1Q9NRR8 79 aa12.75□□□□□ -0.37
LGR4-202ENST00000389858 NBEAL1Q6ZS30 2694 aa12.74□□□□□ -0.37
LGR4-202ENST00000389858 HRES1P13985 223 aa12.73□□□□□ -0.37
LGR4-202ENST00000389858 VPS13AQ96RL7 3174 aa12.73□□□□□ -0.37
LGR4-202ENST00000389858 MMP24-AS1A0A0U1RRL7 71 aa12.72□□□□□ -0.37
LGR4-202ENST00000389858 NOTCH1P46531 2555 aa12.71□□□□□ -0.38
LGR4-202ENST00000389858 MAP1AP78559 2803 aaPredicted RBP12.7□□□□□ -0.38
LGR4-202ENST00000389858 KRTAP1-5Q9BYS1 174 aa12.69□□□□□ -0.38
LGR4-202ENST00000389858 SPRR1BP22528 89 aa12.69□□□□□ -0.38
LGR4-202ENST00000389858 UNC79Q9P2D8 2635 aa12.68□□□□□ -0.38
LGR4-202ENST00000389858 KTN1-AS1Q86SY8 53 aa12.68□□□□□ -0.38
LGR4-202ENST00000389858 GCN1Q92616 2671 aaKnown RBP12.68□□□□□ -0.38
LGR4-202ENST00000389858 CDH23Q9H251 3354 aa12.65□□□□□ -0.38
LGR4-202ENST00000389858 Q1T7F1 81 aa12.65□□□□□ -0.38
LGR4-202ENST00000389858 ZCCHC13Q8WW36 166 aaKnown RBP12.64□□□□□ -0.39
LGR4-202ENST00000389858 KRTAP26-1Q6PEX3 210 aa12.62□□□□□ -0.39
LGR4-202ENST00000389858 LCA10Q71F78 164 aa12.6□□□□□ -0.39
LGR4-202ENST00000389858 Q8N9P0 234 aaPredicted RBP12.6□□□□□ -0.39
LGR4-202ENST00000389858 LINC00472Q9H8W2 130 aa12.59□□□□□ -0.39
LGR4-202ENST00000389858 A0A1B0GU33 70 aa12.58□□□□□ -0.4
LGR4-202ENST00000389858 DSPP15924 2871 aaKnown RBP12.56□□□□□ -0.4
LGR4-202ENST00000389858 IGSF10Q6WRI0 2623 aa12.53□□□□□ -0.4
LGR4-202ENST00000389858 Q5W150 140 aa12.5□□□□□ -0.41
LGR4-202ENST00000389858 FRYQ5TBA9 3013 aa12.5□□□□□ -0.41
LGR4-202ENST00000389858 CAMK2N1Q7Z7J9 78 aa12.49□□□□□ -0.41
LGR4-202ENST00000389858 CELSR3Q9NYQ7 3312 aa12.49□□□□□ -0.41
LGR4-202ENST00000389858 FLG2Q5D862 2391 aaPredicted RBP12.49□□□□□ -0.41
LGR4-202ENST00000389858 M0R2T5 61 aa12.49□□□□□ -0.41
LGR4-202ENST00000389858 UBR5O95071 2799 aaPredicted RBP12.48□□□□□ -0.41
LGR4-202ENST00000389858 CSAG1Q6PB30 78 aa12.47□□□□□ -0.41
LGR4-202ENST00000389858 KRTAP10-1P60331 282 aa12.47□□□□□ -0.41
LGR4-202ENST00000389858 Q75L30 129 aa12.47□□□□□ -0.41
LGR4-202ENST00000389858 FREM2Q5SZK8 3169 aa12.45□□□□□ -0.42
LGR4-202ENST00000389858 LCE6AA0A183 80 aa12.45□□□□□ -0.42
LGR4-202ENST00000389858 LINC01558Q9Y6Z2 57 aa12.45□□□□□ -0.42
LGR4-202ENST00000389858 KRTAP10-2P60368 255 aa12.44□□□□□ -0.42
LGR4-202ENST00000389858 SPINK7P58062 85 aa12.43□□□□□ -0.42
LGR4-202ENST00000389858 BAHCC1Q9P281 2608 aa12.43□□□□□ -0.42
LGR4-202ENST00000389858 Q5VSD8 79 aa12.41□□□□□ -0.42
LGR4-202ENST00000389858 S4R3F8 94 aa12.41□□□□□ -0.42
LGR4-202ENST00000389858 NBEAL2Q6ZNJ1 2754 aa12.41□□□□□ -0.42
LGR4-202ENST00000389858 VCANP13611 3396 aa12.4□□□□□ -0.43
LGR4-202ENST00000389858 LAMA1P25391 3075 aa12.39□□□□□ -0.43
LGR4-202ENST00000389858 CYSTM1Q9H1C7 97 aa12.37□□□□□ -0.43
LGR4-202ENST00000389858 LINC00483Q53H64 154 aa12.35□□□□□ -0.43
LGR4-202ENST00000389858 DMAC1Q96GE9 116 aa12.34□□□□□ -0.43
LGR4-202ENST00000389858 SZT2Q5T011 3432 aa12.34□□□□□ -0.43
LGR4-202ENST00000389858 NBEAQ8NFP9 2946 aa12.34□□□□□ -0.43
LGR4-202ENST00000389858 SEC61BP60468 96 aaKnown RBP12.33□□□□□ -0.44
LGR4-202ENST00000389858 DNAH14Q0VDD8 3507 aa12.32□□□□□ -0.44
LGR4-202ENST00000389858 KRTAP4-16G5E9R7 235 aaPredicted RBP12.31□□□□□ -0.44
LGR4-202ENST00000389858 PANO1I0J062 215 aa12.31□□□□□ -0.44
LGR4-202ENST00000389858 STAB2Q8WWQ8 2551 aa12.3□□□□□ -0.44
LGR4-202ENST00000389858 LUZP6Q538Z0 58 aa12.29□□□□□ -0.44
LGR4-202ENST00000389858 Q6ZR54 194 aa12.28□□□□□ -0.44
LGR4-202ENST00000389858 FP248Q71RG6 208 aaPredicted RBP12.28□□□□□ -0.44
LGR4-202ENST00000389858 NSD1Q96L73 2696 aaPredicted RBP12.28□□□□□ -0.44
LGR4-202ENST00000389858 Q5XG85 94 aa12.25□□□□□ -0.45
LGR4-202ENST00000389858 DMBT1Q9UGM3 2413 aaPredicted RBP12.22□□□□□ -0.45
LGR4-202ENST00000389858 R4GN34 69 aa12.22□□□□□ -0.45
LGR4-202ENST00000389858 Q5VV11 94 aa12.21□□□□□ -0.46
LGR4-202ENST00000389858 ITPR2Q14571 2701 aa12.2□□□□□ -0.46
LGR4-202ENST00000389858 ITPR1Q14643 2758 aa12.17□□□□□ -0.46
LGR4-202ENST00000389858 KALRNO60229 2985 aa12.17□□□□□ -0.46
LGR4-202ENST00000389858 A0A087X002 238 aa12.13□□□□□ -0.47
LGR4-202ENST00000389858 BOD1L1Q8NFC6 3051 aa12.11□□□□□ -0.47
LGR4-202ENST00000389858 ADGRG4Q8IZF6 3080 aa12.1□□□□□ -0.47
LGR4-202ENST00000389858 KRTAP29-1A8MX34 341 aaPredicted RBP12.1□□□□□ -0.47
LGR4-202ENST00000389858 ATMQ13315 3056 aa12.09□□□□□ -0.47
LGR4-202ENST00000389858 FLNCQ14315 2725 aa12.09□□□□□ -0.47
LGR4-202ENST00000389858 FRYLO94915 3013 aa12.08□□□□□ -0.48
LGR4-202ENST00000389858 PRAC1Q96KF2 57 aa12.06□□□□□ -0.48
LGR4-202ENST00000389858 RPL37P61927 97 aaKnown RBP12.03□□□□□ -0.48
LGR4-202ENST00000389858 TACC2O95359 2948 aa12.03□□□□□ -0.48
LGR4-202ENST00000389858 Q6ZRN7 208 aaPredicted RBP12.02□□□□□ -0.49
LGR4-202ENST00000389858 DMXL2Q8TDJ6 3036 aa12.01□□□□□ -0.49
LGR4-202ENST00000389858 KRTAP11-1Q8IUC1 163 aa11.99□□□□□ -0.49
LGR4-202ENST00000389858 M0QZ58 72 aa11.97□□□□□ -0.49
LGR4-202ENST00000389858 COL12A1Q99715 3063 aa11.97□□□□□ -0.49
LGR4-202ENST00000389858 OXTP01178 125 aa11.97□□□□□ -0.49
LGR4-202ENST00000389858 H1FX-AS1Q4G0G2 97 aa11.97□□□□□ -0.49
LGR4-202ENST00000389858 NOTCH2NLQ7Z3S9 236 aa11.95□□□□□ -0.5
LGR4-202ENST00000389858 COL6A3P12111 3177 aa11.94□□□□□ -0.5
LGR4-202ENST00000389858 SPEGQ15772 3267 aa11.93□□□□□ -0.5
LGR4-202ENST00000389858 ASB16-AS1Q495Z4 193 aa11.92□□□□□ -0.5
LGR4-202ENST00000389858 KRTAP7-1Q8IUC3 87 aa11.9□□□□□ -0.5
LGR4-202ENST00000389858 LRBAP50851 2863 aa11.88□□□□□ -0.51
LGR4-202ENST00000389858 UTP20O75691 2785 aaKnown RBP11.88□□□□□ -0.51
LGR4-202ENST00000389858 ROMO1P60602 79 aa11.88□□□□□ -0.51
LGR4-202ENST00000389858 RPS29P62273 56 aaKnown RBP11.88□□□□□ -0.51
LGR4-202ENST00000389858 ADM2Q7Z4H4 148 aa11.86□□□□□ -0.51
LGR4-202ENST00000389858 CFAP47Q6ZTR5 3102 aa11.84□□□□□ -0.51
LGR4-202ENST00000389858 HIVEP1P15822 2718 aa11.83□□□□□ -0.52
LGR4-202ENST00000389858 ASH1LQ9NR48 2969 aaKnown RBP11.83□□□□□ -0.52
LGR4-202ENST00000389858 REV3LO60673 3130 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms