RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 KRTAP26-1Q6PEX3 210 aa9.3□□□□□ -0.92
ALK-201ENST00000389048 Q5VSD8 79 aa9.3□□□□□ -0.92
ALK-201ENST00000389048 EPG5Q9HCE0 2579 aa9.3□□□□□ -0.92
ALK-201ENST00000389048 KRTAP1-5Q9BYS1 174 aa9.28□□□□□ -0.92
ALK-201ENST00000389048 HECTD1Q9ULT8 2610 aa9.27□□□□□ -0.93
ALK-201ENST00000389048 FLNBO75369 2602 aaKnown RBP9.26□□□□□ -0.93
ALK-201ENST00000389048 SPRR1AP35321 89 aa9.26□□□□□ -0.93
ALK-201ENST00000389048 KRTAP10-2P60368 255 aa9.24□□□□□ -0.93
ALK-201ENST00000389048 PCNTO95613 3336 aa9.24□□□□□ -0.93
ALK-201ENST00000389048 KRTAP10-1P60331 282 aa9.23□□□□□ -0.93
ALK-201ENST00000389048 KRTAP16-1A8MUX0 517 aa9.22□□□□□ -0.93
ALK-201ENST00000389048 USP24Q9UPU5 2620 aa9.2□□□□□ -0.94
ALK-201ENST00000389048 CEP350Q5VT06 3117 aa9.18□□□□□ -0.94
ALK-201ENST00000389048 SEC61BP60468 96 aaKnown RBP9.18□□□□□ -0.94
ALK-201ENST00000389048 PLAC4Q8WY50 150 aa9.18□□□□□ -0.94
ALK-201ENST00000389048 Q6ZR54 194 aa9.18□□□□□ -0.94
ALK-201ENST00000389048 PANO1I0J062 215 aa9.15□□□□□ -0.94
ALK-201ENST00000389048 A8MU10 97 aa9.14□□□□□ -0.95
ALK-201ENST00000389048 A0A087X002 238 aa9.11□□□□□ -0.95
ALK-201ENST00000389048 NOTCH2NLQ7Z3S9 236 aa9.11□□□□□ -0.95
ALK-201ENST00000389048 SPRR1BP22528 89 aa9.11□□□□□ -0.95
ALK-201ENST00000389048 MGAM2Q2M2H8 2515 aa9.11□□□□□ -0.95
ALK-201ENST00000389048 C20orf166-AS1Q96NR2 134 aa9.09□□□□□ -0.95
ALK-201ENST00000389048 PRRC2CQ9Y520 2896 aaKnown RBP9.08□□□□□ -0.96
ALK-201ENST00000389048 NDUFAF8A1L188 74 aa9.06□□□□□ -0.96
ALK-201ENST00000389048 KRTAP25-1Q3LHN0 102 aa9.03□□□□□ -0.96
ALK-201ENST00000389048 A6NN06 94 aa9□□□□□ -0.97
ALK-201ENST00000389048 CFAP54Q96N23 3096 aa8.97□□□□□ -0.97
ALK-201ENST00000389048 KRTAP29-1A8MX34 341 aaPredicted RBP8.93□□□□□ -0.98
ALK-201ENST00000389048 KRTAP11-1Q8IUC1 163 aa8.93□□□□□ -0.98
ALK-201ENST00000389048 LCE6AA0A183 80 aa8.91□□□□□ -0.98
ALK-201ENST00000389048 A8MUU9 505 aa8.91□□□□□ -0.98
ALK-201ENST00000389048 KRTAP4-16G5E9R7 235 aaPredicted RBP8.89□□□□□ -0.99
ALK-201ENST00000389048 ASB16-AS1Q495Z4 193 aa8.89□□□□□ -0.99
ALK-201ENST00000389048 ATRQ13535 2644 aa8.87□□□□□ -0.99
ALK-201ENST00000389048 MKI67P46013 3256 aaKnown RBP8.86□□□□□ -0.99
ALK-201ENST00000389048 HELZ2Q9BYK8 2649 aaKnown RBP8.85□□□□□ -0.99
ALK-201ENST00000389048 C10orf95Q9H7T3 257 aa8.83□□□□□ -1
ALK-201ENST00000389048 FLG2Q5D862 2391 aaPredicted RBP8.83□□□□□ -1
ALK-201ENST00000389048 FLNAP21333 2647 aaKnown RBP8.83□□□□□ -1
ALK-201ENST00000389048 MAST4O15021 2626 aa8.82□□□□□ -1
ALK-201ENST00000389048 ITPR3Q14573 2671 aa8.82□□□□□ -1
ALK-201ENST00000389048 A0A0C4DFX4 3053 aa8.81□□□□□ -1
ALK-201ENST00000389048 XIRP2A4UGR9 3374 aa8.78□□□□□ -1
ALK-201ENST00000389048 FREM2Q5SZK8 3169 aa8.77□□□□□ -1.01
ALK-201ENST00000389048 BRCA2P51587 3418 aa8.75□□□□□ -1.01
ALK-201ENST00000389048 CFAP46Q8IYW2 2715 aa8.75□□□□□ -1.01
ALK-201ENST00000389048 CELSR3Q9NYQ7 3312 aa8.69□□□□□ -1.02
ALK-201ENST00000389048 KRTAP7-1Q8IUC3 87 aa8.69□□□□□ -1.02
ALK-201ENST00000389048 TRIOO75962 3097 aa8.69□□□□□ -1.02
ALK-201ENST00000389048 LAMA2P24043 3122 aaKnown RBP8.68□□□□□ -1.02
ALK-201ENST00000389048 CHD7Q9P2D1 2997 aa8.67□□□□□ -1.02
ALK-201ENST00000389048 KRTAP13-2Q52LG2 175 aa8.66□□□□□ -1.02
ALK-201ENST00000389048 DMBT1Q9UGM3 2413 aaPredicted RBP8.63□□□□□ -1.03
ALK-201ENST00000389048 AKAP13Q12802 2813 aa8.62□□□□□ -1.03
ALK-201ENST00000389048 CHD6Q8TD26 2715 aa8.61□□□□□ -1.03
ALK-201ENST00000389048 A0A1B0GVY2 172 aa8.6□□□□□ -1.03
ALK-201ENST00000389048 TNP1P09430 55 aa8.6□□□□□ -1.03
ALK-201ENST00000389048 LAMA3Q16787 3333 aa8.59□□□□□ -1.03
ALK-201ENST00000389048 TEP1Q99973 2627 aaKnown RBP8.58□□□□□ -1.04
ALK-201ENST00000389048 SETXQ7Z333 2677 aaKnown RBP8.58□□□□□ -1.04
ALK-201ENST00000389048 RANBP2P49792 3224 aaKnown RBP8.58□□□□□ -1.04
ALK-201ENST00000389048 NBEAL1Q6ZS30 2694 aa8.57□□□□□ -1.04
ALK-201ENST00000389048 Q6ZRN7 208 aaPredicted RBP8.53□□□□□ -1.04
ALK-201ENST00000389048 DNAH14Q0VDD8 3507 aa8.53□□□□□ -1.04
ALK-201ENST00000389048 MGAQ8IWI9 3026 aa8.53□□□□□ -1.04
ALK-201ENST00000389048 CENPEQ02224 2701 aa8.53□□□□□ -1.04
ALK-201ENST00000389048 UNC80Q8N2C7 3258 aa8.51□□□□□ -1.05
ALK-201ENST00000389048 TEX15Q9BXT5 2789 aa8.5□□□□□ -1.05
ALK-201ENST00000389048 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
ALK-201ENST00000389048 CDH23Q9H251 3354 aa8.48□□□□□ -1.05
ALK-201ENST00000389048 STAB1Q9NY15 2570 aa8.48□□□□□ -1.05
ALK-201ENST00000389048 BAHCC1Q9P281 2608 aa8.46□□□□□ -1.06
ALK-201ENST00000389048 RPS29P62273 56 aaKnown RBP8.44□□□□□ -1.06
ALK-201ENST00000389048 PRUNE2Q8WUY3 3088 aa8.44□□□□□ -1.06
ALK-201ENST00000389048 WDFY4Q6ZS81 3184 aa8.44□□□□□ -1.06
ALK-201ENST00000389048 HTTP42858 3142 aa8.43□□□□□ -1.06
ALK-201ENST00000389048 SZT2Q5T011 3432 aa8.42□□□□□ -1.06
ALK-201ENST00000389048 KRTAP13-1Q8IUC0 172 aa8.42□□□□□ -1.06
ALK-201ENST00000389048 VPS13AQ96RL7 3174 aa8.41□□□□□ -1.06
ALK-201ENST00000389048 GCN1Q92616 2671 aaKnown RBP8.41□□□□□ -1.06
ALK-201ENST00000389048 NBEAL2Q6ZNJ1 2754 aa8.4□□□□□ -1.07
ALK-201ENST00000389048 CHD9Q3L8U1 2897 aa8.38□□□□□ -1.07
ALK-201ENST00000389048 REV3LO60673 3130 aa8.38□□□□□ -1.07
ALK-201ENST00000389048 FRYQ5TBA9 3013 aa8.34□□□□□ -1.07
ALK-201ENST00000389048 UNC79Q9P2D8 2635 aa8.33□□□□□ -1.08
ALK-201ENST00000389048 COL6A3P12111 3177 aa8.32□□□□□ -1.08
ALK-201ENST00000389048 STAB2Q8WWQ8 2551 aa8.31□□□□□ -1.08
ALK-201ENST00000389048 COL6A5A8TX70 2615 aa8.31□□□□□ -1.08
ALK-201ENST00000389048 H0YAA0 97 aa8.28□□□□□ -1.08
ALK-201ENST00000389048 KALRNO60229 2985 aa8.24□□□□□ -1.09
ALK-201ENST00000389048 CFAP47Q6ZTR5 3102 aa8.24□□□□□ -1.09
ALK-201ENST00000389048 DSPP15924 2871 aaKnown RBP8.22□□□□□ -1.09
ALK-201ENST00000389048 P0C880 135 aa8.21□□□□□ -1.09
ALK-201ENST00000389048 XP32Q5T750 250 aa8.21□□□□□ -1.09
ALK-201ENST00000389048 VCANP13611 3396 aa8.2□□□□□ -1.1
ALK-201ENST00000389048 NOTCH1P46531 2555 aa8.19□□□□□ -1.1
ALK-201ENST00000389048 ZNF292O60281 2723 aa8.17□□□□□ -1.1
ALK-201ENST00000389048 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
ALK-201ENST00000389048 PP632Q6XCG6 107 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms