RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TEX49A0A1B0GTD5 131 aa9.37□□□□□ -0.91
SNRPB-201ENST00000381342 Q6ZQY7 126 aa9.37□□□□□ -0.91
SNRPB-201ENST00000381342 H0YGX0 51 aa9.36□□□□□ -0.91
SNRPB-201ENST00000381342 UBR4Q5T4S7 5183 aa9.35□□□□□ -0.91
SNRPB-201ENST00000381342 SCGB1C2P0DMR2 95 aa9.35□□□□□ -0.91
SNRPB-201ENST00000381342 FAM218AQ96MZ4 157 aa9.35□□□□□ -0.91
SNRPB-201ENST00000381342 LAMTOR3Q9UHA4 124 aa9.35□□□□□ -0.91
SNRPB-201ENST00000381342 Q8N377 158 aa9.34□□□□□ -0.91
SNRPB-201ENST00000381342 TRBV20-1A0A075B6N2 111 aa9.33□□□□□ -0.92
SNRPB-201ENST00000381342 SMIM29Q86T20 159 aa9.33□□□□□ -0.92
SNRPB-201ENST00000381342 SSBP3-AS1Q7Z2R9 100 aa9.32□□□□□ -0.92
SNRPB-201ENST00000381342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.31□□□□□ -0.92
SNRPB-201ENST00000381342 CLEC2BQ92478 149 aa9.31□□□□□ -0.92
SNRPB-201ENST00000381342 SPCS1Q9Y6A9 102 aa9.31□□□□□ -0.92
SNRPB-201ENST00000381342 A0A1B0GV90 55 aa9.3□□□□□ -0.92
SNRPB-201ENST00000381342 A0A1B0GX51 115 aa9.3□□□□□ -0.92
SNRPB-201ENST00000381342 LST1O00453 97 aa9.3□□□□□ -0.92
SNRPB-201ENST00000381342 TCL1BO95988 128 aa9.3□□□□□ -0.92
SNRPB-201ENST00000381342 C4orf48Q5BLP8 95 aa9.3□□□□□ -0.92
SNRPB-201ENST00000381342 SPAG11AQ6PDA7 123 aa9.3□□□□□ -0.92
SNRPB-201ENST00000381342 K7EP34 96 aa9.29□□□□□ -0.92
SNRPB-201ENST00000381342 ATXN8Q156A1 80 aa9.29□□□□□ -0.92
SNRPB-201ENST00000381342 LRP2P98164 4655 aa9.29□□□□□ -0.92
SNRPB-201ENST00000381342 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
SNRPB-201ENST00000381342 TRACP01848 142 aa9.27□□□□□ -0.93
SNRPB-201ENST00000381342 GTF2H5Q6ZYL4 71 aa9.27□□□□□ -0.93
SNRPB-201ENST00000381342 SNCGO76070 127 aa9.26□□□□□ -0.93
SNRPB-201ENST00000381342 F8WEM9 126 aa9.25□□□□□ -0.93
SNRPB-201ENST00000381342 SPINK1P00995 79 aa9.25□□□□□ -0.93
SNRPB-201ENST00000381342 A0A0G2JQZ4 141 aa9.24□□□□□ -0.93
SNRPB-201ENST00000381342 HRCT1Q6UXD1 115 aa9.24□□□□□ -0.93
SNRPB-201ENST00000381342 PPDPFLQ8WWR9 84 aa9.24□□□□□ -0.93
SNRPB-201ENST00000381342 H3BMG7 143 aa9.23□□□□□ -0.93
SNRPB-201ENST00000381342 OCIAD2Q56VL3 154 aa9.22□□□□□ -0.93
SNRPB-201ENST00000381342 DNAL4O96015 105 aa9.21□□□□□ -0.94
SNRPB-201ENST00000381342 RPS29P62273 56 aaKnown RBP9.2□□□□□ -0.94
SNRPB-201ENST00000381342 UBE2V1Q13404 147 aa9.2□□□□□ -0.94
SNRPB-201ENST00000381342 LPAP08519 4548 aa9.19□□□□□ -0.94
SNRPB-201ENST00000381342 IGLV8-61A0A075B6I0 122 aa9.18□□□□□ -0.94
SNRPB-201ENST00000381342 C9JAW5 83 aa9.17□□□□□ -0.94
SNRPB-201ENST00000381342 H3BQ85 93 aa9.16□□□□□ -0.94
SNRPB-201ENST00000381342 CD164Q04900 197 aa9.16□□□□□ -0.94
SNRPB-201ENST00000381342 ORMDL1Q9P0S3 153 aa9.16□□□□□ -0.94
SNRPB-201ENST00000381342 PRO0461Q9UI25 63 aa9.16□□□□□ -0.94
SNRPB-201ENST00000381342 H3BT86 120 aa9.15□□□□□ -0.94
SNRPB-201ENST00000381342 GHRHP01286 108 aa9.15□□□□□ -0.94
SNRPB-201ENST00000381342 NDUFV3P56181 108 aaKnown RBP9.15□□□□□ -0.94
SNRPB-201ENST00000381342 IGFL1Q6UW32 110 aa9.15□□□□□ -0.94
SNRPB-201ENST00000381342 IGLV7-46A0A075B6I9 117 aa9.14□□□□□ -0.95
SNRPB-201ENST00000381342 Q6JHZ5 121 aa9.14□□□□□ -0.95
SNRPB-201ENST00000381342 LIMD2Q9BT23 127 aa9.14□□□□□ -0.95
SNRPB-201ENST00000381342 F8W1H4 67 aa9.13□□□□□ -0.95
SNRPB-201ENST00000381342 BAALC-AS2P0C853 105 aa9.12□□□□□ -0.95
SNRPB-201ENST00000381342 CDIP1Q9H305 208 aa9.12□□□□□ -0.95
SNRPB-201ENST00000381342 TMEM256-PLSCR3K7ERE1 68 aa9.11□□□□□ -0.95
SNRPB-201ENST00000381342 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
SNRPB-201ENST00000381342 MTURNQ8N3F0 131 aa9.11□□□□□ -0.95
SNRPB-201ENST00000381342 ANKRD29Q8N6D5 301 aa9.11□□□□□ -0.95
SNRPB-201ENST00000381342 A0A1B0GV72 72 aa9.1□□□□□ -0.95
SNRPB-201ENST00000381342 SMCPP49901 116 aaPredicted RBP9.1□□□□□ -0.95
SNRPB-201ENST00000381342 TPRXLQ17RH7 258 aa9.08□□□□□ -0.96
SNRPB-201ENST00000381342 TRBV7-7A0A0K0K1E9 115 aa9.06□□□□□ -0.96
SNRPB-201ENST00000381342 A0A0U1RQV1 116 aa9.06□□□□□ -0.96
SNRPB-201ENST00000381342 RNF213Q63HN8 5207 aa9.06□□□□□ -0.96
SNRPB-201ENST00000381342 Q5XG85 94 aa9.05□□□□□ -0.96
SNRPB-201ENST00000381342 TEN1Q86WV5 123 aa9.02□□□□□ -0.97
SNRPB-201ENST00000381342 KRTAP13-3Q3SY46 172 aa9.01□□□□□ -0.97
SNRPB-201ENST00000381342 C1orf195Q5TG92 126 aa9.01□□□□□ -0.97
SNRPB-201ENST00000381342 Q6Q795 121 aa9.01□□□□□ -0.97
SNRPB-201ENST00000381342 JMJD7-PLA2G4BH0Y9G9 81 aa9□□□□□ -0.97
SNRPB-201ENST00000381342 OBSCN-AS1Q96MR7 158 aa9□□□□□ -0.97
SNRPB-201ENST00000381342 A0A1W2PNM2 257 aa8.99□□□□□ -0.97
SNRPB-201ENST00000381342 ETDBQ3ZM63 59 aa8.99□□□□□ -0.97
SNRPB-201ENST00000381342 A0A087WSZ3 146 aa8.96□□□□□ -0.98
SNRPB-201ENST00000381342 ASB16-AS1Q495Z4 193 aa8.96□□□□□ -0.98
SNRPB-201ENST00000381342 TRBV7-4A0A0J9YYF1 115 aa8.95□□□□□ -0.98
SNRPB-201ENST00000381342 RBM3P98179 157 aaKnown RBP8.95□□□□□ -0.98
SNRPB-201ENST00000381342 CCKP06307 115 aa8.94□□□□□ -0.98
SNRPB-201ENST00000381342 SS18L2Q9UHA2 77 aa8.94□□□□□ -0.98
SNRPB-201ENST00000381342 LOC110117498A0A087WWA1 95 aa8.92□□□□□ -0.98
SNRPB-201ENST00000381342 DSCR8Q96T75 97 aa8.92□□□□□ -0.98
SNRPB-201ENST00000381342 C9orf92A6NGG3 77 aa8.91□□□□□ -0.98
SNRPB-201ENST00000381342 PDE6GP18545 87 aa8.91□□□□□ -0.98
SNRPB-201ENST00000381342 C21orf62-AS1Q17RA5 79 aa8.91□□□□□ -0.98
SNRPB-201ENST00000381342 VPS25Q9BRG1 176 aa8.91□□□□□ -0.98
SNRPB-201ENST00000381342 C14orf132Q9NPU4 83 aa8.91□□□□□ -0.98
SNRPB-201ENST00000381342 LCE2DQ5TA82 110 aaPredicted RBP8.88□□□□□ -0.99
SNRPB-201ENST00000381342 SEC61BP60468 96 aaKnown RBP8.87□□□□□ -0.99
SNRPB-201ENST00000381342 XP32Q5T750 250 aa8.87□□□□□ -0.99
SNRPB-201ENST00000381342 Q6ZQT0 140 aa8.87□□□□□ -0.99
SNRPB-201ENST00000381342 MUC17Q685J3 4493 aa8.87□□□□□ -0.99
SNRPB-201ENST00000381342 Q96NJ1 140 aa8.86□□□□□ -0.99
SNRPB-201ENST00000381342 J3QR89 54 aa8.82□□□□□ -1
SNRPB-201ENST00000381342 A0A1B0GW54 56 aa8.81□□□□□ -1
SNRPB-201ENST00000381342 SIGMAR1Q99720 223 aa8.81□□□□□ -1
SNRPB-201ENST00000381342 FAM240AA0A1B0GVK7 77 aa8.8□□□□□ -1
SNRPB-201ENST00000381342 MUC2Q02817 5179 aa8.8□□□□□ -1
SNRPB-201ENST00000381342 K7ERU9 68 aa8.79□□□□□ -1
SNRPB-201ENST00000381342 DEFB116Q30KQ4 102 aa8.78□□□□□ -1
SNRPB-201ENST00000381342 IGKV4-1P06312 121 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 803 ms