RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 SPATA8Q6RVD6 105 aa10.09□□□□□ -0.79
SNAPC3-202ENST00000380821 ADM2Q7Z4H4 148 aa10.09□□□□□ -0.79
SNAPC3-202ENST00000380821 CENPFP49454 3210 aa10.06□□□□□ -0.8
SNAPC3-202ENST00000380821 SEC61BP60468 96 aaKnown RBP10.05□□□□□ -0.8
SNAPC3-202ENST00000380821 ACANP16112 2415 aa10.04□□□□□ -0.8
SNAPC3-202ENST00000380821 M0QZ58 72 aa10.02□□□□□ -0.81
SNAPC3-202ENST00000380821 LCE6AA0A183 80 aa10□□□□□ -0.81
SNAPC3-202ENST00000380821 KRTAP10-1P60331 282 aa9.98□□□□□ -0.81
SNAPC3-202ENST00000380821 SPTBN4Q9H254 2564 aa9.98□□□□□ -0.81
SNAPC3-202ENST00000380821 A8MU10 97 aa9.96□□□□□ -0.82
SNAPC3-202ENST00000380821 Q5VSD8 79 aa9.93□□□□□ -0.82
SNAPC3-202ENST00000380821 KRTAP10-2P60368 255 aa9.92□□□□□ -0.82
SNAPC3-202ENST00000380821 PANO1I0J062 215 aa9.9□□□□□ -0.82
SNAPC3-202ENST00000380821 FASNP49327 2511 aaKnown RBP9.89□□□□□ -0.83
SNAPC3-202ENST00000380821 A0A087X002 238 aa9.87□□□□□ -0.83
SNAPC3-202ENST00000380821 NOTCH2NLQ7Z3S9 236 aa9.87□□□□□ -0.83
SNAPC3-202ENST00000380821 RPS29P62273 56 aaKnown RBP9.86□□□□□ -0.83
SNAPC3-202ENST00000380821 PLAC4Q8WY50 150 aa9.81□□□□□ -0.84
SNAPC3-202ENST00000380821 KRTAP11-1Q8IUC1 163 aa9.74□□□□□ -0.85
SNAPC3-202ENST00000380821 KRTAP7-1Q8IUC3 87 aa9.72□□□□□ -0.85
SNAPC3-202ENST00000380821 A8MUU9 505 aa9.69□□□□□ -0.86
SNAPC3-202ENST00000380821 BPTFQ12830 3046 aa9.68□□□□□ -0.86
SNAPC3-202ENST00000380821 C20orf166-AS1Q96NR2 134 aa9.68□□□□□ -0.86
SNAPC3-202ENST00000380821 KRTAP13-1Q8IUC0 172 aa9.67□□□□□ -0.86
SNAPC3-202ENST00000380821 GOLGB1Q14789 3259 aaKnown RBP9.66□□□□□ -0.86
SNAPC3-202ENST00000380821 Q6ZRN7 208 aaPredicted RBP9.64□□□□□ -0.87
SNAPC3-202ENST00000380821 FLNAP21333 2647 aaKnown RBP9.6□□□□□ -0.87
SNAPC3-202ENST00000380821 FLG2Q5D862 2391 aaPredicted RBP9.59□□□□□ -0.87
SNAPC3-202ENST00000380821 KRTAP13-2Q52LG2 175 aa9.57□□□□□ -0.88
SNAPC3-202ENST00000380821 EPG5Q9HCE0 2579 aa9.54□□□□□ -0.88
SNAPC3-202ENST00000380821 DNAH12Q6ZR08 3092 aa9.51□□□□□ -0.89
SNAPC3-202ENST00000380821 ITPR3Q14573 2671 aa9.48□□□□□ -0.89
SNAPC3-202ENST00000380821 HECTD1Q9ULT8 2610 aa9.47□□□□□ -0.89
SNAPC3-202ENST00000380821 MGAM2Q2M2H8 2515 aa9.45□□□□□ -0.9
SNAPC3-202ENST00000380821 USP24Q9UPU5 2620 aa9.43□□□□□ -0.9
SNAPC3-202ENST00000380821 PRRC2CQ9Y520 2896 aaKnown RBP9.41□□□□□ -0.9
SNAPC3-202ENST00000380821 ATRQ13535 2644 aa9.37□□□□□ -0.91
SNAPC3-202ENST00000380821 TNP1P09430 55 aa9.37□□□□□ -0.91
SNAPC3-202ENST00000380821 C10orf95Q9H7T3 257 aa9.35□□□□□ -0.91
SNAPC3-202ENST00000380821 PP632Q6XCG6 107 aa9.28□□□□□ -0.92
SNAPC3-202ENST00000380821 UTRNP46939 3433 aa9.26□□□□□ -0.93
SNAPC3-202ENST00000380821 CHD7Q9P2D1 2997 aa9.25□□□□□ -0.93
SNAPC3-202ENST00000380821 DMBT1Q9UGM3 2413 aaPredicted RBP9.2□□□□□ -0.94
SNAPC3-202ENST00000380821 MAST4O15021 2626 aa9.18□□□□□ -0.94
SNAPC3-202ENST00000380821 C5orf42Q9H799 3197 aa9.18□□□□□ -0.94
SNAPC3-202ENST00000380821 H0YAA0 97 aa9.16□□□□□ -0.94
SNAPC3-202ENST00000380821 CHD9Q3L8U1 2897 aa9.15□□□□□ -0.94
SNAPC3-202ENST00000380821 HELZ2Q9BYK8 2649 aaKnown RBP9.15□□□□□ -0.95
SNAPC3-202ENST00000380821 FLNBO75369 2602 aaKnown RBP9.12□□□□□ -0.95
SNAPC3-202ENST00000380821 P0C880 135 aa9.11□□□□□ -0.95
SNAPC3-202ENST00000380821 NBEAL1Q6ZS30 2694 aa9.1□□□□□ -0.95
SNAPC3-202ENST00000380821 PCNTO95613 3336 aa9.08□□□□□ -0.96
SNAPC3-202ENST00000380821 KRTAP1-4P0C5Y4 121 aa9.07□□□□□ -0.96
SNAPC3-202ENST00000380821 GCN1Q92616 2671 aaKnown RBP9.06□□□□□ -0.96
SNAPC3-202ENST00000380821 CFAP46Q8IYW2 2715 aa9.04□□□□□ -0.96
SNAPC3-202ENST00000380821 XP32Q5T750 250 aa9.04□□□□□ -0.96
SNAPC3-202ENST00000380821 CHD6Q8TD26 2715 aa9.03□□□□□ -0.96
SNAPC3-202ENST00000380821 UNC79Q9P2D8 2635 aa9.02□□□□□ -0.97
SNAPC3-202ENST00000380821 CENPEQ02224 2701 aa9.01□□□□□ -0.97
SNAPC3-202ENST00000380821 CEP350Q5VT06 3117 aa9.01□□□□□ -0.97
SNAPC3-202ENST00000380821 TRANK1O15050 2925 aa8.93□□□□□ -0.98
SNAPC3-202ENST00000380821 KRTAP10-8P60410 259 aa8.89□□□□□ -0.99
SNAPC3-202ENST00000380821 HTTP42858 3142 aa8.88□□□□□ -0.99
SNAPC3-202ENST00000380821 AKAP13Q12802 2813 aa8.87□□□□□ -0.99
SNAPC3-202ENST00000380821 STAB1Q9NY15 2570 aa8.87□□□□□ -0.99
SNAPC3-202ENST00000380821 KRTAP21-3Q3LHN1 58 aa8.85□□□□□ -0.99
SNAPC3-202ENST00000380821 TEX15Q9BXT5 2789 aa8.85□□□□□ -0.99
SNAPC3-202ENST00000380821 MGAQ8IWI9 3026 aa8.84□□□□□ -0.99
SNAPC3-202ENST00000380821 TEP1Q99973 2627 aaKnown RBP8.84□□□□□ -0.99
SNAPC3-202ENST00000380821 CFAP54Q96N23 3096 aa8.84□□□□□ -0.99
SNAPC3-202ENST00000380821 TPRXLQ17RH7 258 aa8.83□□□□□ -1
SNAPC3-202ENST00000380821 NBEAL2Q6ZNJ1 2754 aa8.83□□□□□ -1
SNAPC3-202ENST00000380821 A0A0C4DFX4 3053 aa8.81□□□□□ -1
SNAPC3-202ENST00000380821 SETXQ7Z333 2677 aaKnown RBP8.78□□□□□ -1
SNAPC3-202ENST00000380821 ZNF292O60281 2723 aa8.77□□□□□ -1.01
SNAPC3-202ENST00000380821 KRTAP13-3Q3SY46 172 aa8.76□□□□□ -1.01
SNAPC3-202ENST00000380821 A0A1B0GVY2 172 aa8.76□□□□□ -1.01
SNAPC3-202ENST00000380821 KMT2BQ9UMN6 2715 aaPredicted RBP8.75□□□□□ -1.01
SNAPC3-202ENST00000380821 STAB2Q8WWQ8 2551 aa8.67□□□□□ -1.02
SNAPC3-202ENST00000380821 PRO2289Q9P1D8 64 aa8.64□□□□□ -1.03
SNAPC3-202ENST00000380821 NOTCH1P46531 2555 aa8.64□□□□□ -1.03
SNAPC3-202ENST00000380821 COL6A5A8TX70 2615 aa8.64□□□□□ -1.03
SNAPC3-202ENST00000380821 NSD1Q96L73 2696 aaPredicted RBP8.63□□□□□ -1.03
SNAPC3-202ENST00000380821 RANBP2P49792 3224 aaKnown RBP8.61□□□□□ -1.03
SNAPC3-202ENST00000380821 MKI67P46013 3256 aaKnown RBP8.61□□□□□ -1.03
SNAPC3-202ENST00000380821 IGSF10Q6WRI0 2623 aa8.6□□□□□ -1.03
SNAPC3-202ENST00000380821 BAHCC1Q9P281 2608 aa8.59□□□□□ -1.03
SNAPC3-202ENST00000380821 KRTAP10-10P60014 251 aa8.58□□□□□ -1.04
SNAPC3-202ENST00000380821 ITPR2Q14571 2701 aa8.57□□□□□ -1.04
SNAPC3-202ENST00000380821 KRTAP12-2P59991 146 aa8.57□□□□□ -1.04
SNAPC3-202ENST00000380821 TRIOO75962 3097 aa8.56□□□□□ -1.04
SNAPC3-202ENST00000380821 LAMA3Q16787 3333 aa8.54□□□□□ -1.04
SNAPC3-202ENST00000380821 FRYQ5TBA9 3013 aa8.54□□□□□ -1.04
SNAPC3-202ENST00000380821 APCP25054 2843 aa8.49□□□□□ -1.05
SNAPC3-202ENST00000380821 KRTAP13-4Q3LI77 160 aa8.48□□□□□ -1.05
SNAPC3-202ENST00000380821 BRCA2P51587 3418 aa8.48□□□□□ -1.05
SNAPC3-202ENST00000380821 LAMA2P24043 3122 aaKnown RBP8.46□□□□□ -1.05
SNAPC3-202ENST00000380821 UNC80Q8N2C7 3258 aa8.45□□□□□ -1.06
SNAPC3-202ENST00000380821 UBR5O95071 2799 aaPredicted RBP8.44□□□□□ -1.06
SNAPC3-202ENST00000380821 MAP1AP78559 2803 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms