RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 KLK9Q2XQG4 91 aa7.56□□□□□ -1.2
CHD3-203ENST00000380358 C20orf166-AS1Q96NR2 134 aa7.56□□□□□ -1.2
CHD3-203ENST00000380358 HECTD1Q9ULT8 2610 aa7.55□□□□□ -1.2
CHD3-203ENST00000380358 KRTAP1-3Q8IUG1 177 aa7.54□□□□□ -1.2
CHD3-203ENST00000380358 MMP24-AS1A0A0U1RRL7 71 aa7.53□□□□□ -1.2
CHD3-203ENST00000380358 ROMO1P60602 79 aa7.53□□□□□ -1.2
CHD3-203ENST00000380358 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
CHD3-203ENST00000380358 USP34Q70CQ2 3546 aa7.52□□□□□ -1.21
CHD3-203ENST00000380358 Q75L30 129 aa7.52□□□□□ -1.21
CHD3-203ENST00000380358 KRTAP10-1P60331 282 aa7.52□□□□□ -1.21
CHD3-203ENST00000380358 RPL37P61927 97 aaKnown RBP7.51□□□□□ -1.21
CHD3-203ENST00000380358 CDH23Q9H251 3354 aa7.5□□□□□ -1.21
CHD3-203ENST00000380358 KRTAP1-1Q07627 177 aa7.49□□□□□ -1.21
CHD3-203ENST00000380358 PLAC8Q9NZF1 115 aa7.49□□□□□ -1.21
CHD3-203ENST00000380358 FLNBO75369 2602 aaKnown RBP7.48□□□□□ -1.21
CHD3-203ENST00000380358 Q8NDZ9 215 aa7.47□□□□□ -1.21
CHD3-203ENST00000380358 MAST4O15021 2626 aa7.47□□□□□ -1.21
CHD3-203ENST00000380358 LINC01558Q9Y6Z2 57 aa7.46□□□□□ -1.22
CHD3-203ENST00000380358 CFAP46Q8IYW2 2715 aa7.44□□□□□ -1.22
CHD3-203ENST00000380358 DNAH14Q0VDD8 3507 aa7.43□□□□□ -1.22
CHD3-203ENST00000380358 XIRP2A4UGR9 3374 aa7.43□□□□□ -1.22
CHD3-203ENST00000380358 Q5VV11 94 aa7.4□□□□□ -1.22
CHD3-203ENST00000380358 KRTAP1-5Q9BYS1 174 aa7.39□□□□□ -1.23
CHD3-203ENST00000380358 LCE6AA0A183 80 aa7.38□□□□□ -1.23
CHD3-203ENST00000380358 ITPR3Q14573 2671 aa7.37□□□□□ -1.23
CHD3-203ENST00000380358 CYSTM1Q9H1C7 97 aa7.37□□□□□ -1.23
CHD3-203ENST00000380358 AKAP13Q12802 2813 aa7.36□□□□□ -1.23
CHD3-203ENST00000380358 CFAP54Q96N23 3096 aa7.35□□□□□ -1.23
CHD3-203ENST00000380358 Q6ZR54 194 aa7.34□□□□□ -1.24
CHD3-203ENST00000380358 DMBT1Q9UGM3 2413 aaPredicted RBP7.33□□□□□ -1.24
CHD3-203ENST00000380358 A8MU10 97 aa7.33□□□□□ -1.24
CHD3-203ENST00000380358 OXTP01178 125 aa7.33□□□□□ -1.24
CHD3-203ENST00000380358 A0A0C4DFX4 3053 aa7.31□□□□□ -1.24
CHD3-203ENST00000380358 A8MUU9 505 aa7.31□□□□□ -1.24
CHD3-203ENST00000380358 LINC00472Q9H8W2 130 aa7.31□□□□□ -1.24
CHD3-203ENST00000380358 KRTAP26-1Q6PEX3 210 aa7.31□□□□□ -1.24
CHD3-203ENST00000380358 FREM2Q5SZK8 3169 aa7.31□□□□□ -1.24
CHD3-203ENST00000380358 UNC80Q8N2C7 3258 aa7.3□□□□□ -1.24
CHD3-203ENST00000380358 A0A087X002 238 aa7.29□□□□□ -1.24
CHD3-203ENST00000380358 STAB1Q9NY15 2570 aa7.29□□□□□ -1.24
CHD3-203ENST00000380358 PANO1I0J062 215 aa7.29□□□□□ -1.24
CHD3-203ENST00000380358 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
CHD3-203ENST00000380358 SZT2Q5T011 3432 aa7.27□□□□□ -1.24
CHD3-203ENST00000380358 VCANP13611 3396 aa7.27□□□□□ -1.25
CHD3-203ENST00000380358 Q5XG85 94 aa7.27□□□□□ -1.25
CHD3-203ENST00000380358 FLNAP21333 2647 aaKnown RBP7.26□□□□□ -1.25
CHD3-203ENST00000380358 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
CHD3-203ENST00000380358 A0A1B0GVY2 172 aa7.24□□□□□ -1.25
CHD3-203ENST00000380358 SPRR1BP22528 89 aa7.23□□□□□ -1.25
CHD3-203ENST00000380358 NBEAL1Q6ZS30 2694 aa7.23□□□□□ -1.25
CHD3-203ENST00000380358 PRUNE2Q8WUY3 3088 aa7.22□□□□□ -1.25
CHD3-203ENST00000380358 STAB2Q8WWQ8 2551 aa7.21□□□□□ -1.26
CHD3-203ENST00000380358 NOTCH2NLQ7Z3S9 236 aa7.2□□□□□ -1.26
CHD3-203ENST00000380358 MYO15AQ9UKN7 3530 aa7.2□□□□□ -1.26
CHD3-203ENST00000380358 RANBP2P49792 3224 aaKnown RBP7.2□□□□□ -1.26
CHD3-203ENST00000380358 SPEGQ15772 3267 aa7.2□□□□□ -1.26
CHD3-203ENST00000380358 HTTP42858 3142 aa7.19□□□□□ -1.26
CHD3-203ENST00000380358 TEX15Q9BXT5 2789 aa7.19□□□□□ -1.26
CHD3-203ENST00000380358 SPRR1AP35321 89 aa7.19□□□□□ -1.26
CHD3-203ENST00000380358 CHD6Q8TD26 2715 aa7.19□□□□□ -1.26
CHD3-203ENST00000380358 NDUFAF8A1L188 74 aa7.17□□□□□ -1.26
CHD3-203ENST00000380358 CELSR3Q9NYQ7 3312 aa7.15□□□□□ -1.26
CHD3-203ENST00000380358 EYSQ5T1H1 3165 aa7.14□□□□□ -1.27
CHD3-203ENST00000380358 KRTAP10-8P60410 259 aa7.14□□□□□ -1.27
CHD3-203ENST00000380358 HELZ2Q9BYK8 2649 aaKnown RBP7.13□□□□□ -1.27
CHD3-203ENST00000380358 CENPEQ02224 2701 aa7.1□□□□□ -1.27
CHD3-203ENST00000380358 TNP1P09430 55 aa7.09□□□□□ -1.28
CHD3-203ENST00000380358 SETXQ7Z333 2677 aaKnown RBP7.09□□□□□ -1.28
CHD3-203ENST00000380358 TEP1Q99973 2627 aaKnown RBP7.05□□□□□ -1.28
CHD3-203ENST00000380358 REV3LO60673 3130 aa7.04□□□□□ -1.28
CHD3-203ENST00000380358 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
CHD3-203ENST00000380358 COL6A5A8TX70 2615 aa7.03□□□□□ -1.28
CHD3-203ENST00000380358 FRYQ5TBA9 3013 aa7.03□□□□□ -1.28
CHD3-203ENST00000380358 TRIOO75962 3097 aa7.03□□□□□ -1.28
CHD3-203ENST00000380358 LAMA1P25391 3075 aa7.03□□□□□ -1.28
CHD3-203ENST00000380358 CRYBG3Q68DQ2 2970 aa7.03□□□□□ -1.28
CHD3-203ENST00000380358 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
CHD3-203ENST00000380358 CHD7Q9P2D1 2997 aa7.01□□□□□ -1.29
CHD3-203ENST00000380358 UNC79Q9P2D8 2635 aa7□□□□□ -1.29
CHD3-203ENST00000380358 VPS13AQ96RL7 3174 aa6.98□□□□□ -1.29
CHD3-203ENST00000380358 SPTBN5Q9NRC6 3674 aaKnown RBP6.96□□□□□ -1.3
CHD3-203ENST00000380358 WDFY3Q8IZQ1 3526 aa6.94□□□□□ -1.3
CHD3-203ENST00000380358 BAHCC1Q9P281 2608 aa6.93□□□□□ -1.3
CHD3-203ENST00000380358 MGAQ8IWI9 3026 aa6.91□□□□□ -1.3
CHD3-203ENST00000380358 P0C880 135 aa6.91□□□□□ -1.3
CHD3-203ENST00000380358 NOTCH1P46531 2555 aa6.89□□□□□ -1.31
CHD3-203ENST00000380358 KMT2BQ9UMN6 2715 aaPredicted RBP6.89□□□□□ -1.31
CHD3-203ENST00000380358 KRTAP10-10P60014 251 aa6.89□□□□□ -1.31
CHD3-203ENST00000380358 KRTAP13-2Q52LG2 175 aa6.87□□□□□ -1.31
CHD3-203ENST00000380358 KRTAP29-1A8MX34 341 aaPredicted RBP6.86□□□□□ -1.31
CHD3-203ENST00000380358 WDFY4Q6ZS81 3184 aa6.86□□□□□ -1.31
CHD3-203ENST00000380358 CFAP47Q6ZTR5 3102 aa6.84□□□□□ -1.31
CHD3-203ENST00000380358 KRTAP4-16G5E9R7 235 aaPredicted RBP6.84□□□□□ -1.31
CHD3-203ENST00000380358 NBEAL2Q6ZNJ1 2754 aa6.84□□□□□ -1.31
CHD3-203ENST00000380358 GCN1Q92616 2671 aaKnown RBP6.82□□□□□ -1.32
CHD3-203ENST00000380358 FRYLO94915 3013 aa6.79□□□□□ -1.32
CHD3-203ENST00000380358 COL6A3P12111 3177 aa6.76□□□□□ -1.33
CHD3-203ENST00000380358 A6NN06 94 aa6.75□□□□□ -1.33
CHD3-203ENST00000380358 DMXL2Q8TDJ6 3036 aa6.74□□□□□ -1.33
CHD3-203ENST00000380358 TRANK1O15050 2925 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms