RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 A4D1N5 150 aa2.52□□□□□ -2.01
C9orf72-203ENST00000380003 AKR1D1P51857 326 aa2.52□□□□□ -2.01
C9orf72-203ENST00000380003 KRTAP19-2Q3LHN2 52 aa2.52□□□□□ -2.01
C9orf72-203ENST00000380003 DHRS4-AS1Q9P1J3 65 aa2.52□□□□□ -2.01
C9orf72-203ENST00000380003 TEX49A0A1B0GTD5 131 aa2.51□□□□□ -2.01
C9orf72-203ENST00000380003 H3BUT2 72 aa2.51□□□□□ -2.01
C9orf72-203ENST00000380003 C1orf195Q5TG92 126 aa2.51□□□□□ -2.01
C9orf72-203ENST00000380003 Q6ZQY7 126 aa2.51□□□□□ -2.01
C9orf72-203ENST00000380003 SNRPEP62304 92 aaKnown RBP2.51□□□□□ -2.01
C9orf72-203ENST00000380003 C14orf144Q96I85 54 aa2.51□□□□□ -2.01
C9orf72-203ENST00000380003 TIMM17BO60830 172 aa2.51□□□□□ -2.01
C9orf72-203ENST00000380003 S100A2P29034 98 aa2.51□□□□□ -2.01
C9orf72-203ENST00000380003 MT1HP80294 61 aa2.51□□□□□ -2.01
C9orf72-203ENST00000380003 HIST3H2BBQ8N257 126 aa2.51□□□□□ -2.01
C9orf72-203ENST00000380003 SCGB1D1O95968 90 aa2.5□□□□□ -2.01
C9orf72-203ENST00000380003 COA6Q5JTJ3 125 aaKnown RBP2.5□□□□□ -2.01
C9orf72-203ENST00000380003 PRO1933Q9H354 126 aa2.5□□□□□ -2.01
C9orf72-203ENST00000380003 C20orf202A1L168 122 aa2.5□□□□□ -2.01
C9orf72-203ENST00000380003 M0R2T5 61 aa2.5□□□□□ -2.01
C9orf72-203ENST00000380003 SPRR1BP22528 89 aa2.5□□□□□ -2.01
C9orf72-203ENST00000380003 Q6Q795 121 aa2.5□□□□□ -2.01
C9orf72-203ENST00000380003 FLGP20930 4061 aaPredicted RBP2.5□□□□□ -2.01
C9orf72-203ENST00000380003 OBSCN-AS1Q96MR7 158 aa2.49□□□□□ -2.01
C9orf72-203ENST00000380003 C21orf62-AS1Q17RA5 79 aa2.49□□□□□ -2.01
C9orf72-203ENST00000380003 A0A1B0GWB2 263 aa2.49□□□□□ -2.01
C9orf72-203ENST00000380003 HIST1H4GQ99525 98 aa2.49□□□□□ -2.01
C9orf72-203ENST00000380003 LIMD2Q9BT23 127 aa2.49□□□□□ -2.01
C9orf72-203ENST00000380003 PAM16Q9Y3D7 125 aa2.49□□□□□ -2.01
C9orf72-203ENST00000380003 S100A6P06703 90 aa2.48□□□□□ -2.01
C9orf72-203ENST00000380003 SLC25A34Q6PIV7 304 aa2.48□□□□□ -2.01
C9orf72-203ENST00000380003 IGFL1Q6UW32 110 aa2.48□□□□□ -2.01
C9orf72-203ENST00000380003 IGLV5-48A0A075B6I7 105 aa2.48□□□□□ -2.01
C9orf72-203ENST00000380003 RPS29P62273 56 aaKnown RBP2.48□□□□□ -2.01
C9orf72-203ENST00000380003 LINC00575Q6W349 94 aa2.48□□□□□ -2.01
C9orf72-203ENST00000380003 COX6B2Q6YFQ2 88 aa2.48□□□□□ -2.01
C9orf72-203ENST00000380003 hADV29S1A0JD25 119 aa2.47□□□□□ -2.01
C9orf72-203ENST00000380003 FAM218AQ96MZ4 157 aa2.47□□□□□ -2.01
C9orf72-203ENST00000380003 TRAV13-2A0A0B4J235 113 aa2.47□□□□□ -2.01
C9orf72-203ENST00000380003 HSBP1L1C9JCN9 74 aa2.47□□□□□ -2.01
C9orf72-203ENST00000380003 IFITM1P13164 125 aa2.47□□□□□ -2.01
C9orf72-203ENST00000380003 DEFB116Q30KQ4 102 aa2.47□□□□□ -2.01
C9orf72-203ENST00000380003 NHP2Q9NX24 153 aaKnown RBP2.47□□□□□ -2.01
C9orf72-203ENST00000380003 F8WEM9 126 aa2.46□□□□□ -2.02
C9orf72-203ENST00000380003 CFC1BP0CG36 223 aa2.46□□□□□ -2.02
C9orf72-203ENST00000380003 CFC1P0CG37 223 aa2.46□□□□□ -2.02
C9orf72-203ENST00000380003 SNHG12Q9BXW3 62 aa2.46□□□□□ -2.02
C9orf72-203ENST00000380003 CRCT1Q9UGL9 99 aa2.46□□□□□ -2.02
C9orf72-203ENST00000380003 CTAG1AP78358 180 aa2.45□□□□□ -2.02
C9orf72-203ENST00000380003 VAMP3Q15836 100 aa2.45□□□□□ -2.02
C9orf72-203ENST00000380003 OCIAD2Q56VL3 154 aa2.45□□□□□ -2.02
C9orf72-203ENST00000380003 Q96NJ1 140 aa2.45□□□□□ -2.02
C9orf72-203ENST00000380003 CBY1Q9Y3M2 126 aa2.45□□□□□ -2.02
C9orf72-203ENST00000380003 K7ERJ3 54 aa2.45□□□□□ -2.02
C9orf72-203ENST00000380003 RPL37P61927 97 aaKnown RBP2.45□□□□□ -2.02
C9orf72-203ENST00000380003 Q6ZVH6 145 aa2.45□□□□□ -2.02
C9orf72-203ENST00000380003 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
C9orf72-203ENST00000380003 A0A087WSZ3 146 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 TRBV7-6A0A0J9YX20 115 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 FABP2P12104 132 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 KRTAP10-6P60371 365 aaPredicted RBP2.44□□□□□ -2.02
C9orf72-203ENST00000380003 CLEC2BQ92478 149 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 TRBV7-7A0A0K0K1E9 115 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 SPATA45Q537H7 98 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 COPS9Q8WXC6 57 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 C5orf52A6NGY3 159 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 TCL1BO95988 128 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 COX8AP10176 69 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 CD164Q04900 197 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 C2orf91Q6ZV80 131 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 RAB37Q96AX2 223 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
C9orf72-203ENST00000380003 H3BMG7 143 aa2.43□□□□□ -2.02
C9orf72-203ENST00000380003 FXYD2P54710 66 aa2.43□□□□□ -2.02
C9orf72-203ENST00000380003 NOTCH2NLQ7Z3S9 236 aa2.43□□□□□ -2.02
C9orf72-203ENST00000380003 KRTAP16-1A8MUX0 517 aa2.43□□□□□ -2.02
C9orf72-203ENST00000380003 DSCR10P59022 87 aa2.43□□□□□ -2.02
C9orf72-203ENST00000380003 ATP11AUNQ6ZP68 121 aa2.42□□□□□ -2.02
C9orf72-203ENST00000380003 LST1O00453 97 aa2.42□□□□□ -2.02
C9orf72-203ENST00000380003 NDUFV3P56181 108 aaKnown RBP2.42□□□□□ -2.02
C9orf72-203ENST00000380003 BVES-AS1Q5T3Y7 98 aa2.42□□□□□ -2.02
C9orf72-203ENST00000380003 VAMP8Q9BV40 100 aa2.42□□□□□ -2.02
C9orf72-203ENST00000380003 TRIAP1O43715 76 aa2.41□□□□□ -2.02
C9orf72-203ENST00000380003 Q5XG85 94 aa2.41□□□□□ -2.02
C9orf72-203ENST00000380003 S100A1P23297 94 aa2.41□□□□□ -2.02
C9orf72-203ENST00000380003 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.41□□□□□ -2.02
C9orf72-203ENST00000380003 VPS25Q9BRG1 176 aa2.41□□□□□ -2.02
C9orf72-203ENST00000380003 SIGMAR1Q99720 223 aa2.4□□□□□ -2.02
C9orf72-203ENST00000380003 NAA38Q9BRA0 125 aaKnown RBP2.4□□□□□ -2.02
C9orf72-203ENST00000380003 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.02
C9orf72-203ENST00000380003 A0A1W2PNM2 257 aa2.4□□□□□ -2.03
C9orf72-203ENST00000380003 PYY3Q5JQD4 70 aa2.4□□□□□ -2.03
C9orf72-203ENST00000380003 CEND1Q8N111 149 aa2.4□□□□□ -2.03
C9orf72-203ENST00000380003 PRO1854Q9UHT4 67 aa2.4□□□□□ -2.03
C9orf72-203ENST00000380003 PSMB2P49721 201 aa2.39□□□□□ -2.03
C9orf72-203ENST00000380003 Q6JHZ5 121 aa2.39□□□□□ -2.03
C9orf72-203ENST00000380003 IGKV4-1P06312 121 aa2.38□□□□□ -2.03
C9orf72-203ENST00000380003 IGHV6-1A0A0B4J1U7 121 aa2.38□□□□□ -2.03
C9orf72-203ENST00000380003 TEN1Q86WV5 123 aa2.38□□□□□ -2.03
C9orf72-203ENST00000380003 A0A0B4J2C4 111 aa2.37□□□□□ -2.03
C9orf72-203ENST00000380003 CCKP06307 115 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms