RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 LINC00336Q6ZUF6 198 aa10.59□□□□□ -0.71
THUMPD2-201ENST00000378727 RYR2Q92736 4967 aa10.57□□□□□ -0.72
THUMPD2-201ENST00000378727 TRBV7-7A0A0K0K1E9 115 aa10.56□□□□□ -0.72
THUMPD2-201ENST00000378727 A0A1W2PNM2 257 aa10.56□□□□□ -0.72
THUMPD2-201ENST00000378727 F8WEM9 126 aa10.56□□□□□ -0.72
THUMPD2-201ENST00000378727 ZNF861PO60384 105 aa10.56□□□□□ -0.72
THUMPD2-201ENST00000378727 C21orf62-AS1Q17RA5 79 aa10.56□□□□□ -0.72
THUMPD2-201ENST00000378727 IGLV8-61A0A075B6I0 122 aa10.55□□□□□ -0.72
THUMPD2-201ENST00000378727 SCGB1A1P11684 91 aa10.55□□□□□ -0.72
THUMPD2-201ENST00000378727 Q6JHZ5 121 aa10.55□□□□□ -0.72
THUMPD2-201ENST00000378727 UBL5Q9BZL1 73 aa10.54□□□□□ -0.72
THUMPD2-201ENST00000378727 KMT2CQ8NEZ4 4911 aaKnown RBP10.54□□□□□ -0.72
THUMPD2-201ENST00000378727 A0A0G2JQZ4 141 aa10.53□□□□□ -0.72
THUMPD2-201ENST00000378727 Q6Q795 121 aa10.53□□□□□ -0.72
THUMPD2-201ENST00000378727 SPRR4Q96PI1 79 aa10.53□□□□□ -0.72
THUMPD2-201ENST00000378727 A0A1B0GVY2 172 aa10.53□□□□□ -0.72
THUMPD2-201ENST00000378727 IGLV7-43P04211 117 aa10.53□□□□□ -0.72
THUMPD2-201ENST00000378727 Q6ZVQ6 151 aa10.53□□□□□ -0.72
THUMPD2-201ENST00000378727 PKHD1P08F94 4074 aa10.52□□□□□ -0.73
THUMPD2-201ENST00000378727 IGKV3D-7A0A0C4DH55 119 aa10.52□□□□□ -0.73
THUMPD2-201ENST00000378727 IGFL1Q6UW32 110 aa10.52□□□□□ -0.73
THUMPD2-201ENST00000378727 PCP4P48539 62 aa10.51□□□□□ -0.73
THUMPD2-201ENST00000378727 Q8NBF4 154 aa10.51□□□□□ -0.73
THUMPD2-201ENST00000378727 IMUPQ9GZP8 106 aa10.5□□□□□ -0.73
THUMPD2-201ENST00000378727 LINC00483Q53H64 154 aa10.49□□□□□ -0.73
THUMPD2-201ENST00000378727 LRP1BQ9NZR2 4599 aa10.49□□□□□ -0.73
THUMPD2-201ENST00000378727 ZNF706Q9Y5V0 76 aaPredicted RBP10.47□□□□□ -0.73
THUMPD2-201ENST00000378727 ATP5EP2Q5VTU8 51 aa10.46□□□□□ -0.73
THUMPD2-201ENST00000378727 A0A1B0GW54 56 aa10.46□□□□□ -0.74
THUMPD2-201ENST00000378727 CRYGAP11844 174 aa10.45□□□□□ -0.74
THUMPD2-201ENST00000378727 ANAPC11Q9NYG5 84 aa10.44□□□□□ -0.74
THUMPD2-201ENST00000378727 IGLV9-49A0A0B4J1Y8 123 aa10.42□□□□□ -0.74
THUMPD2-201ENST00000378727 NREPQ16612 68 aa10.42□□□□□ -0.74
THUMPD2-201ENST00000378727 DYNC1H1Q14204 4646 aaKnown RBP10.41□□□□□ -0.74
THUMPD2-201ENST00000378727 A0A087WVE0 104 aa10.39□□□□□ -0.75
THUMPD2-201ENST00000378727 CXCL6P80162 114 aa10.39□□□□□ -0.75
THUMPD2-201ENST00000378727 C9orf153Q5TBE3 101 aa10.38□□□□□ -0.75
THUMPD2-201ENST00000378727 FAM236AA0A1B0GUQ0 79 aa10.37□□□□□ -0.75
THUMPD2-201ENST00000378727 FAM236BA0A1B0GV22 79 aa10.37□□□□□ -0.75
THUMPD2-201ENST00000378727 HIST1H4AP62805 103 aaKnown RBP10.37□□□□□ -0.75
THUMPD2-201ENST00000378727 VPS13BQ7Z7G8 4022 aa10.36□□□□□ -0.75
THUMPD2-201ENST00000378727 A0A087WSZ3 146 aa10.35□□□□□ -0.75
THUMPD2-201ENST00000378727 MOBPQ13875 183 aa10.35□□□□□ -0.75
THUMPD2-201ENST00000378727 RPL37AP61513 92 aaKnown RBP10.33□□□□□ -0.76
THUMPD2-201ENST00000378727 BPY2O14599 106 aa10.32□□□□□ -0.76
THUMPD2-201ENST00000378727 RYR3Q15413 4870 aa10.29□□□□□ -0.76
THUMPD2-201ENST00000378727 Q8N9L7 120 aa10.29□□□□□ -0.76
THUMPD2-201ENST00000378727 ANAPC13Q9BS18 74 aa10.29□□□□□ -0.76
THUMPD2-201ENST00000378727 APOBP04114 4563 aaKnown RBP10.29□□□□□ -0.76
THUMPD2-201ENST00000378727 SMR3BP02814 79 aaPredicted RBP10.28□□□□□ -0.76
THUMPD2-201ENST00000378727 IGKV4-1P06312 121 aa10.26□□□□□ -0.77
THUMPD2-201ENST00000378727 HRCT1Q6UXD1 115 aa10.26□□□□□ -0.77
THUMPD2-201ENST00000378727 KRTAP1-4P0C5Y4 121 aa10.26□□□□□ -0.77
THUMPD2-201ENST00000378727 A0A087X002 238 aa10.25□□□□□ -0.77
THUMPD2-201ENST00000378727 DSCR10P59022 87 aa10.25□□□□□ -0.77
THUMPD2-201ENST00000378727 DEFB116Q30KQ4 102 aa10.24□□□□□ -0.77
THUMPD2-201ENST00000378727 KRTAP13-2Q52LG2 175 aa10.22□□□□□ -0.77
THUMPD2-201ENST00000378727 FAM229BQ4G0N7 80 aa10.22□□□□□ -0.77
THUMPD2-201ENST00000378727 LINC00472Q9H8W2 130 aa10.22□□□□□ -0.77
THUMPD2-201ENST00000378727 ATOX1O00244 68 aa10.2□□□□□ -0.78
THUMPD2-201ENST00000378727 KRTAP10-4P60372 401 aaPredicted RBP10.2□□□□□ -0.78
THUMPD2-201ENST00000378727 SSBP3-AS1Q7Z2R9 100 aa10.2□□□□□ -0.78
THUMPD2-201ENST00000378727 SPINK6Q6UWN8 80 aa10.19□□□□□ -0.78
THUMPD2-201ENST00000378727 K7EQZ3 153 aa10.19□□□□□ -0.78
THUMPD2-201ENST00000378727 Q96NJ1 140 aa10.17□□□□□ -0.78
THUMPD2-201ENST00000378727 FAT1Q14517 4588 aa10.17□□□□□ -0.78
THUMPD2-201ENST00000378727 PLA2G1BP04054 148 aaKnown RBP10.14□□□□□ -0.79
THUMPD2-201ENST00000378727 CD164Q04900 197 aa10.14□□□□□ -0.79
THUMPD2-201ENST00000378727 SS18L2Q9UHA2 77 aa10.14□□□□□ -0.79
THUMPD2-201ENST00000378727 CCDC179H3BU77 68 aa10.12□□□□□ -0.79
THUMPD2-201ENST00000378727 A8MWP4 228 aa10.1□□□□□ -0.79
THUMPD2-201ENST00000378727 J3KT08 172 aa10.09□□□□□ -0.79
THUMPD2-201ENST00000378727 SERP2Q8N6R1 65 aa10.09□□□□□ -0.79
THUMPD2-201ENST00000378727 PRR15Q8IV56 129 aa10.08□□□□□ -0.8
THUMPD2-201ENST00000378727 COX7CP15954 63 aa10.07□□□□□ -0.8
THUMPD2-201ENST00000378727 TYMSOSQ8TAI1 123 aa10.05□□□□□ -0.8
THUMPD2-201ENST00000378727 HCG22E2RYF7 251 aa10.05□□□□□ -0.8
THUMPD2-201ENST00000378727 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
THUMPD2-201ENST00000378727 PRR26Q8N8Z3 221 aa10.05□□□□□ -0.8
THUMPD2-201ENST00000378727 UQCRQO14949 82 aa10.04□□□□□ -0.8
THUMPD2-201ENST00000378727 HSPG2P98160 4391 aa10.02□□□□□ -0.8
THUMPD2-201ENST00000378727 TRAV7A0A075B6U4 112 aa10.02□□□□□ -0.81
THUMPD2-201ENST00000378727 ASB16-AS1Q495Z4 193 aa10.02□□□□□ -0.81
THUMPD2-201ENST00000378727 SMIM20Q8N5G0 67 aa10.02□□□□□ -0.81
THUMPD2-201ENST00000378727 Q5XG85 94 aa10□□□□□ -0.81
THUMPD2-201ENST00000378727 WFDC13Q8IUB5 93 aa10□□□□□ -0.81
THUMPD2-201ENST00000378727 FAM229AH3BQW9 127 aa10□□□□□ -0.81
THUMPD2-201ENST00000378727 NDUFB1O75438 58 aa10□□□□□ -0.81
THUMPD2-201ENST00000378727 OCR1Q9BZK8 76 aa10□□□□□ -0.81
THUMPD2-201ENST00000378727 KRTAP29-1A8MX34 341 aaPredicted RBP9.99□□□□□ -0.81
THUMPD2-201ENST00000378727 RYR1P21817 5038 aa9.97□□□□□ -0.81
THUMPD2-201ENST00000378727 MMP24-AS1A0A0U1RRL7 71 aa9.97□□□□□ -0.81
THUMPD2-201ENST00000378727 Q5VSD8 79 aa9.97□□□□□ -0.81
THUMPD2-201ENST00000378727 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
THUMPD2-201ENST00000378727 A0A1B0GVX0 72 aa9.96□□□□□ -0.81
THUMPD2-201ENST00000378727 PKHD1L1Q86WI1 4243 aa9.96□□□□□ -0.82
THUMPD2-201ENST00000378727 CASC2Q6XLA1 102 aa9.95□□□□□ -0.82
THUMPD2-201ENST00000378727 C4orf48Q5BLP8 95 aa9.95□□□□□ -0.82
THUMPD2-201ENST00000378727 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
THUMPD2-201ENST00000378727 IGHV6-1A0A0B4J1U7 121 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms