RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 COL6A5A8TX70 2615 aa6.16□□□□□ -1.42
SPEN-201ENST00000375759 Q5VV11 94 aa6.15□□□□□ -1.42
SPEN-201ENST00000375759 Q6ZSA8 131 aa6.15□□□□□ -1.42
SPEN-201ENST00000375759 A0A0C4DFX4 3053 aa6.14□□□□□ -1.43
SPEN-201ENST00000375759 MMP24-AS1A0A0U1RRL7 71 aa6.13□□□□□ -1.43
SPEN-201ENST00000375759 CSAG1Q6PB30 78 aa6.13□□□□□ -1.43
SPEN-201ENST00000375759 MAP1AP78559 2803 aaPredicted RBP6.11□□□□□ -1.43
SPEN-201ENST00000375759 ZCCHC13Q8WW36 166 aaKnown RBP6.11□□□□□ -1.43
SPEN-201ENST00000375759 PRAC1Q96KF2 57 aa6.11□□□□□ -1.43
SPEN-201ENST00000375759 CYSTM1Q9H1C7 97 aa6.1□□□□□ -1.43
SPEN-201ENST00000375759 S4R3F8 94 aa6.1□□□□□ -1.43
SPEN-201ENST00000375759 STAB2Q8WWQ8 2551 aa6.1□□□□□ -1.43
SPEN-201ENST00000375759 LAMA2P24043 3122 aaKnown RBP6.08□□□□□ -1.44
SPEN-201ENST00000375759 TEP1Q99973 2627 aaKnown RBP6.08□□□□□ -1.44
SPEN-201ENST00000375759 SPRR1AP35321 89 aa6.08□□□□□ -1.44
SPEN-201ENST00000375759 SPINK7P58062 85 aa6.07□□□□□ -1.44
SPEN-201ENST00000375759 Q5W150 140 aa6.06□□□□□ -1.44
SPEN-201ENST00000375759 LINC00472Q9H8W2 130 aa6.06□□□□□ -1.44
SPEN-201ENST00000375759 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
SPEN-201ENST00000375759 ASB16-AS1Q495Z4 193 aa6.05□□□□□ -1.44
SPEN-201ENST00000375759 TNP2Q05952 138 aa6.04□□□□□ -1.44
SPEN-201ENST00000375759 KMT2BQ9UMN6 2715 aaPredicted RBP6.03□□□□□ -1.44
SPEN-201ENST00000375759 ROMO1P60602 79 aa6.03□□□□□ -1.44
SPEN-201ENST00000375759 PLAC8Q9NZF1 115 aa6.02□□□□□ -1.45
SPEN-201ENST00000375759 SPRR1BP22528 89 aa6.02□□□□□ -1.45
SPEN-201ENST00000375759 RPL37P61927 97 aaKnown RBP6.01□□□□□ -1.45
SPEN-201ENST00000375759 ZNF292O60281 2723 aa6.01□□□□□ -1.45
SPEN-201ENST00000375759 NBEAL2Q6ZNJ1 2754 aa6.01□□□□□ -1.45
SPEN-201ENST00000375759 R4GN34 69 aa6.01□□□□□ -1.45
SPEN-201ENST00000375759 KRTAP1-3Q8IUG1 177 aa6□□□□□ -1.45
SPEN-201ENST00000375759 M0R2T5 61 aa5.99□□□□□ -1.45
SPEN-201ENST00000375759 Q8NDZ9 215 aa5.99□□□□□ -1.45
SPEN-201ENST00000375759 MGAQ8IWI9 3026 aa5.98□□□□□ -1.45
SPEN-201ENST00000375759 ITPR2Q14571 2701 aa5.98□□□□□ -1.45
SPEN-201ENST00000375759 CHD7Q9P2D1 2997 aa5.98□□□□□ -1.45
SPEN-201ENST00000375759 APCP25054 2843 aa5.98□□□□□ -1.45
SPEN-201ENST00000375759 OXTP01178 125 aa5.97□□□□□ -1.45
SPEN-201ENST00000375759 KRTAP1-1Q07627 177 aa5.96□□□□□ -1.46
SPEN-201ENST00000375759 BAHCC1Q9P281 2608 aa5.95□□□□□ -1.46
SPEN-201ENST00000375759 SETXQ7Z333 2677 aaKnown RBP5.95□□□□□ -1.46
SPEN-201ENST00000375759 H1FX-AS1Q4G0G2 97 aa5.95□□□□□ -1.46
SPEN-201ENST00000375759 Q6ZR54 194 aa5.95□□□□□ -1.46
SPEN-201ENST00000375759 KRTAP26-1Q6PEX3 210 aa5.92□□□□□ -1.46
SPEN-201ENST00000375759 FRYQ5TBA9 3013 aa5.91□□□□□ -1.46
SPEN-201ENST00000375759 TRANK1O15050 2925 aa5.9□□□□□ -1.46
SPEN-201ENST00000375759 ITPR1Q14643 2758 aa5.89□□□□□ -1.47
SPEN-201ENST00000375759 SEC61BP60468 96 aaKnown RBP5.88□□□□□ -1.47
SPEN-201ENST00000375759 VPS13AQ96RL7 3174 aa5.88□□□□□ -1.47
SPEN-201ENST00000375759 DSPP15924 2871 aaKnown RBP5.86□□□□□ -1.47
SPEN-201ENST00000375759 M0QZ58 72 aa5.86□□□□□ -1.47
SPEN-201ENST00000375759 KRTAP16-1A8MUX0 517 aa5.86□□□□□ -1.47
SPEN-201ENST00000375759 NSD1Q96L73 2696 aaPredicted RBP5.85□□□□□ -1.47
SPEN-201ENST00000375759 TRIOO75962 3097 aa5.84□□□□□ -1.47
SPEN-201ENST00000375759 UTP20O75691 2785 aaKnown RBP5.84□□□□□ -1.47
SPEN-201ENST00000375759 SPATA8Q6RVD6 105 aa5.84□□□□□ -1.47
SPEN-201ENST00000375759 KRTAP29-1A8MX34 341 aaPredicted RBP5.82□□□□□ -1.48
SPEN-201ENST00000375759 UBR5O95071 2799 aaPredicted RBP5.82□□□□□ -1.48
SPEN-201ENST00000375759 FREM2Q5SZK8 3169 aa5.81□□□□□ -1.48
SPEN-201ENST00000375759 KALRNO60229 2985 aa5.81□□□□□ -1.48
SPEN-201ENST00000375759 KRTAP4-16G5E9R7 235 aaPredicted RBP5.81□□□□□ -1.48
SPEN-201ENST00000375759 MKI67P46013 3256 aaKnown RBP5.81□□□□□ -1.48
SPEN-201ENST00000375759 ADM2Q7Z4H4 148 aa5.8□□□□□ -1.48
SPEN-201ENST00000375759 PANO1I0J062 215 aa5.8□□□□□ -1.48
SPEN-201ENST00000375759 WDFY4Q6ZS81 3184 aa5.79□□□□□ -1.48
SPEN-201ENST00000375759 KRTAP1-5Q9BYS1 174 aa5.78□□□□□ -1.48
SPEN-201ENST00000375759 A6NN06 94 aa5.77□□□□□ -1.49
SPEN-201ENST00000375759 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
SPEN-201ENST00000375759 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
SPEN-201ENST00000375759 CHD9Q3L8U1 2897 aa5.76□□□□□ -1.49
SPEN-201ENST00000375759 IGSF10Q6WRI0 2623 aa5.75□□□□□ -1.49
SPEN-201ENST00000375759 PRUNE2Q8WUY3 3088 aa5.74□□□□□ -1.49
SPEN-201ENST00000375759 XIRP2A4UGR9 3374 aa5.74□□□□□ -1.49
SPEN-201ENST00000375759 FRYLO94915 3013 aa5.74□□□□□ -1.49
SPEN-201ENST00000375759 RANBP2P49792 3224 aaKnown RBP5.74□□□□□ -1.49
SPEN-201ENST00000375759 Q5VSD8 79 aa5.73□□□□□ -1.49
SPEN-201ENST00000375759 ASH1LQ9NR48 2969 aaKnown RBP5.73□□□□□ -1.49
SPEN-201ENST00000375759 LRBAP50851 2863 aa5.72□□□□□ -1.49
SPEN-201ENST00000375759 LCE6AA0A183 80 aa5.71□□□□□ -1.5
SPEN-201ENST00000375759 KRTAP10-1P60331 282 aa5.7□□□□□ -1.5
SPEN-201ENST00000375759 CELSR3Q9NYQ7 3312 aa5.69□□□□□ -1.5
SPEN-201ENST00000375759 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
SPEN-201ENST00000375759 LAMA3Q16787 3333 aa5.67□□□□□ -1.5
SPEN-201ENST00000375759 KRTAP10-2P60368 255 aa5.66□□□□□ -1.5
SPEN-201ENST00000375759 A0A087X002 238 aa5.66□□□□□ -1.5
SPEN-201ENST00000375759 NBEAQ8NFP9 2946 aa5.65□□□□□ -1.5
SPEN-201ENST00000375759 DMXL2Q8TDJ6 3036 aa5.65□□□□□ -1.5
SPEN-201ENST00000375759 NOTCH2NLQ7Z3S9 236 aa5.64□□□□□ -1.51
SPEN-201ENST00000375759 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
SPEN-201ENST00000375759 C20orf166-AS1Q96NR2 134 aa5.63□□□□□ -1.51
SPEN-201ENST00000375759 REV3LO60673 3130 aa5.63□□□□□ -1.51
SPEN-201ENST00000375759 A8MUU9 505 aa5.62□□□□□ -1.51
SPEN-201ENST00000375759 HTTP42858 3142 aa5.62□□□□□ -1.51
SPEN-201ENST00000375759 HIVEP1P15822 2718 aa5.61□□□□□ -1.51
SPEN-201ENST00000375759 UNC80Q8N2C7 3258 aa5.61□□□□□ -1.51
SPEN-201ENST00000375759 A8MU10 97 aa5.61□□□□□ -1.51
SPEN-201ENST00000375759 TACC2O95359 2948 aa5.61□□□□□ -1.51
SPEN-201ENST00000375759 BRCA2P51587 3418 aa5.6□□□□□ -1.51
SPEN-201ENST00000375759 FLNCQ14315 2725 aa5.59□□□□□ -1.51
SPEN-201ENST00000375759 COL12A1Q99715 3063 aa5.58□□□□□ -1.52
SPEN-201ENST00000375759 CELSR2Q9HCU4 2923 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms