RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 MGAQ8IWI9 3026 aa10.43□□□□□ -0.74
MCF2L-203ENST00000375604 ZCCHC13Q8WW36 166 aaKnown RBP10.42□□□□□ -0.74
MCF2L-203ENST00000375604 ITPR3Q14573 2671 aa10.42□□□□□ -0.74
MCF2L-203ENST00000375604 KTN1-AS1Q86SY8 53 aa10.41□□□□□ -0.74
MCF2L-203ENST00000375604 A0A1B0GU33 70 aa10.41□□□□□ -0.74
MCF2L-203ENST00000375604 WDFY4Q6ZS81 3184 aa10.4□□□□□ -0.75
MCF2L-203ENST00000375604 WIPF1O43516 503 aa10.39□□□□□ -0.75
MCF2L-203ENST00000375604 FLNBO75369 2602 aaKnown RBP10.37□□□□□ -0.75
MCF2L-203ENST00000375604 Q5W150 140 aa10.35□□□□□ -0.75
MCF2L-203ENST00000375604 CYSTM1Q9H1C7 97 aa10.35□□□□□ -0.75
MCF2L-203ENST00000375604 PANO1I0J062 215 aa10.33□□□□□ -0.75
MCF2L-203ENST00000375604 LCA10Q71F78 164 aa10.31□□□□□ -0.76
MCF2L-203ENST00000375604 SPINK7P58062 85 aa10.31□□□□□ -0.76
MCF2L-203ENST00000375604 SPRR1AP35321 89 aa10.3□□□□□ -0.76
MCF2L-203ENST00000375604 COL6A3P12111 3177 aa10.28□□□□□ -0.76
MCF2L-203ENST00000375604 VCANP13611 3396 aa10.28□□□□□ -0.76
MCF2L-203ENST00000375604 Q1T7F1 81 aa10.27□□□□□ -0.77
MCF2L-203ENST00000375604 KRTAP26-1Q6PEX3 210 aa10.27□□□□□ -0.77
MCF2L-203ENST00000375604 CSAG1Q6PB30 78 aa10.27□□□□□ -0.77
MCF2L-203ENST00000375604 LCE6AA0A183 80 aa10.25□□□□□ -0.77
MCF2L-203ENST00000375604 FREM2Q5SZK8 3169 aa10.24□□□□□ -0.77
MCF2L-203ENST00000375604 LINC00472Q9H8W2 130 aa10.24□□□□□ -0.77
MCF2L-203ENST00000375604 PRAC1Q96KF2 57 aa10.23□□□□□ -0.77
MCF2L-203ENST00000375604 CFAP46Q8IYW2 2715 aa10.22□□□□□ -0.77
MCF2L-203ENST00000375604 ATRQ13535 2644 aa10.21□□□□□ -0.77
MCF2L-203ENST00000375604 VPS13AQ96RL7 3174 aa10.2□□□□□ -0.78
MCF2L-203ENST00000375604 HELZ2Q9BYK8 2649 aaKnown RBP10.19□□□□□ -0.78
MCF2L-203ENST00000375604 SPTBN5Q9NRC6 3674 aaKnown RBP10.19□□□□□ -0.78
MCF2L-203ENST00000375604 AKAP13Q12802 2813 aa10.19□□□□□ -0.78
MCF2L-203ENST00000375604 LUZP6Q538Z0 58 aa10.18□□□□□ -0.78
MCF2L-203ENST00000375604 R4GN34 69 aa10.18□□□□□ -0.78
MCF2L-203ENST00000375604 TRANK1O15050 2925 aa10.18□□□□□ -0.78
MCF2L-203ENST00000375604 LINC00483Q53H64 154 aa10.16□□□□□ -0.78
MCF2L-203ENST00000375604 Q75L30 129 aa10.16□□□□□ -0.78
MCF2L-203ENST00000375604 A0A087X002 238 aa10.13□□□□□ -0.79
MCF2L-203ENST00000375604 SEC61BP60468 96 aaKnown RBP10.12□□□□□ -0.79
MCF2L-203ENST00000375604 DMAC1Q96GE9 116 aa10.11□□□□□ -0.79
MCF2L-203ENST00000375604 MAST4O15021 2626 aa10.11□□□□□ -0.79
MCF2L-203ENST00000375604 SPRR1BP22528 89 aa10.1□□□□□ -0.79
MCF2L-203ENST00000375604 LINC01558Q9Y6Z2 57 aa10.09□□□□□ -0.79
MCF2L-203ENST00000375604 Q5XG85 94 aa10.09□□□□□ -0.79
MCF2L-203ENST00000375604 LAMA1P25391 3075 aa10.09□□□□□ -0.79
MCF2L-203ENST00000375604 M0QZ58 72 aa10.07□□□□□ -0.8
MCF2L-203ENST00000375604 FP248Q71RG6 208 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-203ENST00000375604 SPATA8Q6RVD6 105 aa10.07□□□□□ -0.8
MCF2L-203ENST00000375604 KRTAP11-1Q8IUC1 163 aa10.07□□□□□ -0.8
MCF2L-203ENST00000375604 Q5VV11 94 aa10.06□□□□□ -0.8
MCF2L-203ENST00000375604 ADM2Q7Z4H4 148 aa10.05□□□□□ -0.8
MCF2L-203ENST00000375604 NOTCH2NLQ7Z3S9 236 aa10.03□□□□□ -0.8
MCF2L-203ENST00000375604 Q6ZR54 194 aa10.03□□□□□ -0.8
MCF2L-203ENST00000375604 FRYQ5TBA9 3013 aa10.02□□□□□ -0.8
MCF2L-203ENST00000375604 CENPEQ02224 2701 aa10.01□□□□□ -0.81
MCF2L-203ENST00000375604 CHD6Q8TD26 2715 aa9.99□□□□□ -0.81
MCF2L-203ENST00000375604 H3BS24 57 aa9.99□□□□□ -0.81
MCF2L-203ENST00000375604 USP34Q70CQ2 3546 aa9.97□□□□□ -0.81
MCF2L-203ENST00000375604 TEX15Q9BXT5 2789 aa9.97□□□□□ -0.81
MCF2L-203ENST00000375604 SPEGQ15772 3267 aa9.96□□□□□ -0.81
MCF2L-203ENST00000375604 CFAP47Q6ZTR5 3102 aa9.95□□□□□ -0.82
MCF2L-203ENST00000375604 KRTAP4-16G5E9R7 235 aaPredicted RBP9.94□□□□□ -0.82
MCF2L-203ENST00000375604 H1FX-AS1Q4G0G2 97 aa9.93□□□□□ -0.82
MCF2L-203ENST00000375604 OXTP01178 125 aa9.91□□□□□ -0.82
MCF2L-203ENST00000375604 EYSQ5T1H1 3165 aa9.9□□□□□ -0.82
MCF2L-203ENST00000375604 DSPP15924 2871 aaKnown RBP9.9□□□□□ -0.82
MCF2L-203ENST00000375604 MYO15AQ9UKN7 3530 aa9.9□□□□□ -0.83
MCF2L-203ENST00000375604 REV3LO60673 3130 aa9.87□□□□□ -0.83
MCF2L-203ENST00000375604 TEP1Q99973 2627 aaKnown RBP9.87□□□□□ -0.83
MCF2L-203ENST00000375604 RPL37P61927 97 aaKnown RBP9.86□□□□□ -0.83
MCF2L-203ENST00000375604 PLAC4Q8WY50 150 aa9.86□□□□□ -0.83
MCF2L-203ENST00000375604 ROMO1P60602 79 aa9.84□□□□□ -0.83
MCF2L-203ENST00000375604 BOD1L1Q8NFC6 3051 aa9.83□□□□□ -0.84
MCF2L-203ENST00000375604 KRTAP7-1Q8IUC3 87 aa9.83□□□□□ -0.84
MCF2L-203ENST00000375604 KALRNO60229 2985 aa9.82□□□□□ -0.84
MCF2L-203ENST00000375604 LRBAP50851 2863 aa9.8□□□□□ -0.84
MCF2L-203ENST00000375604 Q6ZRN7 208 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-203ENST00000375604 NBEAL2Q6ZNJ1 2754 aa9.78□□□□□ -0.84
MCF2L-203ENST00000375604 GCN1Q92616 2671 aaKnown RBP9.77□□□□□ -0.85
MCF2L-203ENST00000375604 KRTAP29-1A8MX34 341 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-203ENST00000375604 ZNF292O60281 2723 aa9.76□□□□□ -0.85
MCF2L-203ENST00000375604 MAP1AP78559 2803 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-203ENST00000375604 A8MU10 97 aa9.75□□□□□ -0.85
MCF2L-203ENST00000375604 FRYLO94915 3013 aa9.73□□□□□ -0.85
MCF2L-203ENST00000375604 KRTAP13-2Q52LG2 175 aa9.73□□□□□ -0.85
MCF2L-203ENST00000375604 NBEAL1Q6ZS30 2694 aa9.68□□□□□ -0.86
MCF2L-203ENST00000375604 CRYBG3Q68DQ2 2970 aa9.68□□□□□ -0.86
MCF2L-203ENST00000375604 ATMQ13315 3056 aa9.66□□□□□ -0.86
MCF2L-203ENST00000375604 IGSF10Q6WRI0 2623 aa9.65□□□□□ -0.86
MCF2L-203ENST00000375604 A0A0A0MQY5 61 aa9.65□□□□□ -0.86
MCF2L-203ENST00000375604 A8MUU9 505 aa9.64□□□□□ -0.87
MCF2L-203ENST00000375604 ASPMQ8IZT6 3477 aa9.6□□□□□ -0.87
MCF2L-203ENST00000375604 BAHCC1Q9P281 2608 aa9.59□□□□□ -0.87
MCF2L-203ENST00000375604 DMXL2Q8TDJ6 3036 aa9.59□□□□□ -0.87
MCF2L-203ENST00000375604 SETXQ7Z333 2677 aaKnown RBP9.58□□□□□ -0.88
MCF2L-203ENST00000375604 C20orf166-AS1Q96NR2 134 aa9.58□□□□□ -0.88
MCF2L-203ENST00000375604 COL6A5A8TX70 2615 aa9.58□□□□□ -0.88
MCF2L-203ENST00000375604 UNC79Q9P2D8 2635 aa9.57□□□□□ -0.88
MCF2L-203ENST00000375604 COL12A1Q99715 3063 aa9.57□□□□□ -0.88
MCF2L-203ENST00000375604 STAB1Q9NY15 2570 aa9.57□□□□□ -0.88
MCF2L-203ENST00000375604 ADGRG4Q8IZF6 3080 aa9.57□□□□□ -0.88
MCF2L-203ENST00000375604 WDFY3Q8IZQ1 3526 aa9.55□□□□□ -0.88
MCF2L-203ENST00000375604 TACC2O95359 2948 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms