RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 HELZ2Q9BYK8 2649 aaKnown RBP12.79□□□□□ -0.36
TGFBR1-202ENST00000374994 LINC00483Q53H64 154 aa12.78□□□□□ -0.36
TGFBR1-202ENST00000374994 C5orf42Q9H799 3197 aa12.77□□□□□ -0.36
TGFBR1-202ENST00000374994 DMAC1Q96GE9 116 aa12.76□□□□□ -0.37
TGFBR1-202ENST00000374994 KRTAP1-5Q9BYS1 174 aa12.76□□□□□ -0.37
TGFBR1-202ENST00000374994 COX6B2Q6YFQ2 88 aa12.75□□□□□ -0.37
TGFBR1-202ENST00000374994 ZNF292O60281 2723 aa12.74□□□□□ -0.37
TGFBR1-202ENST00000374994 PRAC1Q96KF2 57 aa12.74□□□□□ -0.37
TGFBR1-202ENST00000374994 A0A0C4DFX4 3053 aa12.74□□□□□ -0.37
TGFBR1-202ENST00000374994 ASB16-AS1Q495Z4 193 aa12.72□□□□□ -0.37
TGFBR1-202ENST00000374994 CFAP46Q8IYW2 2715 aa12.7□□□□□ -0.38
TGFBR1-202ENST00000374994 J3QL48 77 aa12.7□□□□□ -0.38
TGFBR1-202ENST00000374994 LCE6AA0A183 80 aa12.69□□□□□ -0.38
TGFBR1-202ENST00000374994 CHD6Q8TD26 2715 aa12.65□□□□□ -0.38
TGFBR1-202ENST00000374994 PCNTO95613 3336 aa12.65□□□□□ -0.38
TGFBR1-202ENST00000374994 GCN1Q92616 2671 aaKnown RBP12.62□□□□□ -0.39
TGFBR1-202ENST00000374994 UTRNP46939 3433 aa12.61□□□□□ -0.39
TGFBR1-202ENST00000374994 AKAP13Q12802 2813 aa12.61□□□□□ -0.39
TGFBR1-202ENST00000374994 UNC79Q9P2D8 2635 aa12.6□□□□□ -0.39
TGFBR1-202ENST00000374994 CSAG1Q6PB30 78 aa12.6□□□□□ -0.39
TGFBR1-202ENST00000374994 LUZP6Q538Z0 58 aa12.56□□□□□ -0.4
TGFBR1-202ENST00000374994 Q6ZSA8 131 aa12.56□□□□□ -0.4
TGFBR1-202ENST00000374994 MGAQ8IWI9 3026 aa12.55□□□□□ -0.4
TGFBR1-202ENST00000374994 CFAP54Q96N23 3096 aa12.52□□□□□ -0.4
TGFBR1-202ENST00000374994 RANBP2P49792 3224 aaKnown RBP12.5□□□□□ -0.41
TGFBR1-202ENST00000374994 S4R3F8 94 aa12.48□□□□□ -0.41
TGFBR1-202ENST00000374994 SPATA8Q6RVD6 105 aa12.45□□□□□ -0.42
TGFBR1-202ENST00000374994 NBEAL1Q6ZS30 2694 aa12.44□□□□□ -0.42
TGFBR1-202ENST00000374994 H3BS24 57 aa12.43□□□□□ -0.42
TGFBR1-202ENST00000374994 RPL37P61927 97 aaKnown RBP12.43□□□□□ -0.42
TGFBR1-202ENST00000374994 PANO1I0J062 215 aa12.42□□□□□ -0.42
TGFBR1-202ENST00000374994 H1FX-AS1Q4G0G2 97 aa12.42□□□□□ -0.42
TGFBR1-202ENST00000374994 STAB1Q9NY15 2570 aa12.4□□□□□ -0.42
TGFBR1-202ENST00000374994 ROMO1P60602 79 aa12.38□□□□□ -0.43
TGFBR1-202ENST00000374994 A6NN06 94 aa12.38□□□□□ -0.43
TGFBR1-202ENST00000374994 CAMK2N1Q7Z7J9 78 aa12.37□□□□□ -0.43
TGFBR1-202ENST00000374994 KRTAP7-1Q8IUC3 87 aa12.37□□□□□ -0.43
TGFBR1-202ENST00000374994 TEX15Q9BXT5 2789 aa12.34□□□□□ -0.43
TGFBR1-202ENST00000374994 KRTAP10-1P60331 282 aa12.32□□□□□ -0.44
TGFBR1-202ENST00000374994 NBEAL2Q6ZNJ1 2754 aa12.31□□□□□ -0.44
TGFBR1-202ENST00000374994 NOTCH1P46531 2555 aa12.31□□□□□ -0.44
TGFBR1-202ENST00000374994 A0A087X002 238 aa12.3□□□□□ -0.44
TGFBR1-202ENST00000374994 NOTCH2NLQ7Z3S9 236 aa12.3□□□□□ -0.44
TGFBR1-202ENST00000374994 SETXQ7Z333 2677 aaKnown RBP12.29□□□□□ -0.44
TGFBR1-202ENST00000374994 TEP1Q99973 2627 aaKnown RBP12.27□□□□□ -0.44
TGFBR1-202ENST00000374994 KRTAP11-1Q8IUC1 163 aa12.27□□□□□ -0.45
TGFBR1-202ENST00000374994 KRTAP10-2P60368 255 aa12.26□□□□□ -0.45
TGFBR1-202ENST00000374994 COL6A5A8TX70 2615 aa12.26□□□□□ -0.45
TGFBR1-202ENST00000374994 KRTAP13-1Q8IUC0 172 aa12.25□□□□□ -0.45
TGFBR1-202ENST00000374994 IGSF10Q6WRI0 2623 aa12.22□□□□□ -0.45
TGFBR1-202ENST00000374994 RPS29P62273 56 aaKnown RBP12.21□□□□□ -0.45
TGFBR1-202ENST00000374994 Q6ZRN7 208 aaPredicted RBP12.2□□□□□ -0.46
TGFBR1-202ENST00000374994 R4GN34 69 aa12.19□□□□□ -0.46
TGFBR1-202ENST00000374994 LAMA2P24043 3122 aaKnown RBP12.18□□□□□ -0.46
TGFBR1-202ENST00000374994 WDFY4Q6ZS81 3184 aa12.17□□□□□ -0.46
TGFBR1-202ENST00000374994 MKI67P46013 3256 aaKnown RBP12.15□□□□□ -0.46
TGFBR1-202ENST00000374994 DSPP15924 2871 aaKnown RBP12.15□□□□□ -0.47
TGFBR1-202ENST00000374994 UBR5O95071 2799 aaPredicted RBP12.14□□□□□ -0.47
TGFBR1-202ENST00000374994 LAMA3Q16787 3333 aa12.14□□□□□ -0.47
TGFBR1-202ENST00000374994 A0A0A0MQY5 61 aa12.12□□□□□ -0.47
TGFBR1-202ENST00000374994 FRYQ5TBA9 3013 aa12.12□□□□□ -0.47
TGFBR1-202ENST00000374994 MAP1AP78559 2803 aaPredicted RBP12.1□□□□□ -0.47
TGFBR1-202ENST00000374994 SEC61BP60468 96 aaKnown RBP12.08□□□□□ -0.48
TGFBR1-202ENST00000374994 NSD1Q96L73 2696 aaPredicted RBP12.04□□□□□ -0.48
TGFBR1-202ENST00000374994 KRTAP25-1Q3LHN0 102 aa12.04□□□□□ -0.48
TGFBR1-202ENST00000374994 DMBT1Q9UGM3 2413 aaPredicted RBP12.03□□□□□ -0.48
TGFBR1-202ENST00000374994 TRIOO75962 3097 aa12.02□□□□□ -0.49
TGFBR1-202ENST00000374994 Q5VSD8 79 aa11.99□□□□□ -0.49
TGFBR1-202ENST00000374994 M0QZ58 72 aa11.98□□□□□ -0.49
TGFBR1-202ENST00000374994 A8MU10 97 aa11.97□□□□□ -0.49
TGFBR1-202ENST00000374994 KRTAP13-2Q52LG2 175 aa11.96□□□□□ -0.49
TGFBR1-202ENST00000374994 ITPR1Q14643 2758 aa11.95□□□□□ -0.5
TGFBR1-202ENST00000374994 VPS13AQ96RL7 3174 aa11.94□□□□□ -0.5
TGFBR1-202ENST00000374994 ADM2Q7Z4H4 148 aa11.93□□□□□ -0.5
TGFBR1-202ENST00000374994 STAB2Q8WWQ8 2551 aa11.93□□□□□ -0.5
TGFBR1-202ENST00000374994 BAHCC1Q9P281 2608 aa11.91□□□□□ -0.5
TGFBR1-202ENST00000374994 FLNCQ14315 2725 aa11.88□□□□□ -0.51
TGFBR1-202ENST00000374994 BRCA2P51587 3418 aa11.86□□□□□ -0.51
TGFBR1-202ENST00000374994 NBEAQ8NFP9 2946 aa11.86□□□□□ -0.51
TGFBR1-202ENST00000374994 UNC80Q8N2C7 3258 aa11.84□□□□□ -0.51
TGFBR1-202ENST00000374994 KALRNO60229 2985 aa11.82□□□□□ -0.52
TGFBR1-202ENST00000374994 PRUNE2Q8WUY3 3088 aa11.82□□□□□ -0.52
TGFBR1-202ENST00000374994 FLG2Q5D862 2391 aaPredicted RBP11.82□□□□□ -0.52
TGFBR1-202ENST00000374994 M0R2T5 61 aa11.82□□□□□ -0.52
TGFBR1-202ENST00000374994 ITPR2Q14571 2701 aa11.79□□□□□ -0.52
TGFBR1-202ENST00000374994 NIPBLQ6KC79 2804 aaeCLIP11.7□□□□□ -0.54
TGFBR1-202ENST00000374994 A8MUU9 505 aa11.7□□□□□ -0.54
TGFBR1-202ENST00000374994 KMT2BQ9UMN6 2715 aaPredicted RBP11.68□□□□□ -0.54
TGFBR1-202ENST00000374994 ATMQ13315 3056 aa11.68□□□□□ -0.54
TGFBR1-202ENST00000374994 C20orf166-AS1Q96NR2 134 aa11.67□□□□□ -0.54
TGFBR1-202ENST00000374994 KRTAP16-1A8MUX0 517 aa11.65□□□□□ -0.54
TGFBR1-202ENST00000374994 XIRP2A4UGR9 3374 aa11.64□□□□□ -0.55
TGFBR1-202ENST00000374994 UTP20O75691 2785 aaKnown RBP11.63□□□□□ -0.55
TGFBR1-202ENST00000374994 ADGRG4Q8IZF6 3080 aa11.61□□□□□ -0.55
TGFBR1-202ENST00000374994 APCP25054 2843 aa11.61□□□□□ -0.55
TGFBR1-202ENST00000374994 TACC2O95359 2948 aa11.58□□□□□ -0.56
TGFBR1-202ENST00000374994 PLAC4Q8WY50 150 aa11.53□□□□□ -0.56
TGFBR1-202ENST00000374994 LRBAP50851 2863 aa11.53□□□□□ -0.56
TGFBR1-202ENST00000374994 FREM2Q5SZK8 3169 aa11.5□□□□□ -0.57
TGFBR1-202ENST00000374994 COL12A1Q99715 3063 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms