RNA–Protein interactions for RNA: ENST00000373063.7

FOXP4-204, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 5,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-204ENST00000373063 R4GN34 69 aa13.49□□□□□ -0.25
FOXP4-204ENST00000373063 C5orf42Q9H799 3197 aa13.47□□□□□ -0.25
FOXP4-204ENST00000373063 LINC00472Q9H8W2 130 aa13.47□□□□□ -0.25
FOXP4-204ENST00000373063 LUZP6Q538Z0 58 aa13.47□□□□□ -0.25
FOXP4-204ENST00000373063 KTN1-AS1Q86SY8 53 aa13.45□□□□□ -0.26
FOXP4-204ENST00000373063 DMAC1Q96GE9 116 aa13.44□□□□□ -0.26
FOXP4-204ENST00000373063 CHD7Q9P2D1 2997 aa13.43□□□□□ -0.26
FOXP4-204ENST00000373063 FP248Q71RG6 208 aaPredicted RBP13.42□□□□□ -0.26
FOXP4-204ENST00000373063 Q6ZR54 194 aa13.42□□□□□ -0.26
FOXP4-204ENST00000373063 LCA10Q71F78 164 aa13.4□□□□□ -0.26
FOXP4-204ENST00000373063 PANO1I0J062 215 aa13.37□□□□□ -0.27
FOXP4-204ENST00000373063 Q75L30 129 aa13.26□□□□□ -0.29
FOXP4-204ENST00000373063 PCNTO95613 3336 aa13.25□□□□□ -0.29
FOXP4-204ENST00000373063 M0QZ58 72 aa13.24□□□□□ -0.29
FOXP4-204ENST00000373063 LINC01558Q9Y6Z2 57 aa13.24□□□□□ -0.29
FOXP4-204ENST00000373063 A0A087X002 238 aa13.22□□□□□ -0.29
FOXP4-204ENST00000373063 CHD9Q3L8U1 2897 aa13.19□□□□□ -0.3
FOXP4-204ENST00000373063 PLAC4Q8WY50 150 aa13.18□□□□□ -0.3
FOXP4-204ENST00000373063 STAB1Q9NY15 2570 aa13.18□□□□□ -0.3
FOXP4-204ENST00000373063 TEP1Q99973 2627 aaKnown RBP13.14□□□□□ -0.31
FOXP4-204ENST00000373063 TEX15Q9BXT5 2789 aa13.13□□□□□ -0.31
FOXP4-204ENST00000373063 ADM2Q7Z4H4 148 aa13.11□□□□□ -0.31
FOXP4-204ENST00000373063 KRTAP4-16G5E9R7 235 aaPredicted RBP13.08□□□□□ -0.32
FOXP4-204ENST00000373063 BAHCC1Q9P281 2608 aa13.08□□□□□ -0.32
FOXP4-204ENST00000373063 CENPEQ02224 2701 aa13.07□□□□□ -0.32
FOXP4-204ENST00000373063 KRTAP21-3Q3LHN1 58 aa13.04□□□□□ -0.32
FOXP4-204ENST00000373063 Q6ZRN7 208 aaPredicted RBP13.03□□□□□ -0.32
FOXP4-204ENST00000373063 RPL37P61927 97 aaKnown RBP13.02□□□□□ -0.33
FOXP4-204ENST00000373063 SETXQ7Z333 2677 aaKnown RBP13.01□□□□□ -0.33
FOXP4-204ENST00000373063 HTTP42858 3142 aa13.01□□□□□ -0.33
FOXP4-204ENST00000373063 H1FX-AS1Q4G0G2 97 aa13□□□□□ -0.33
FOXP4-204ENST00000373063 MGAQ8IWI9 3026 aa12.99□□□□□ -0.33
FOXP4-204ENST00000373063 ZNF292O60281 2723 aa12.95□□□□□ -0.34
FOXP4-204ENST00000373063 COL6A5A8TX70 2615 aa12.94□□□□□ -0.34
FOXP4-204ENST00000373063 RPS29P62273 56 aaKnown RBP12.94□□□□□ -0.34
FOXP4-204ENST00000373063 CHD6Q8TD26 2715 aa12.93□□□□□ -0.34
FOXP4-204ENST00000373063 KRTAP11-1Q8IUC1 163 aa12.93□□□□□ -0.34
FOXP4-204ENST00000373063 Q5VV11 94 aa12.9□□□□□ -0.34
FOXP4-204ENST00000373063 RANBP2P49792 3224 aaKnown RBP12.9□□□□□ -0.35
FOXP4-204ENST00000373063 AKAP13Q12802 2813 aa12.89□□□□□ -0.35
FOXP4-204ENST00000373063 CYSTM1Q9H1C7 97 aa12.89□□□□□ -0.35
FOXP4-204ENST00000373063 ROMO1P60602 79 aa12.88□□□□□ -0.35
FOXP4-204ENST00000373063 PRAC1Q96KF2 57 aa12.86□□□□□ -0.35
FOXP4-204ENST00000373063 NBEAL1Q6ZS30 2694 aa12.85□□□□□ -0.35
FOXP4-204ENST00000373063 SPATA8Q6RVD6 105 aa12.84□□□□□ -0.35
FOXP4-204ENST00000373063 NOTCH2NLQ7Z3S9 236 aa12.84□□□□□ -0.35
FOXP4-204ENST00000373063 TRANK1O15050 2925 aa12.83□□□□□ -0.36
FOXP4-204ENST00000373063 A0A0C4DFX4 3053 aa12.83□□□□□ -0.36
FOXP4-204ENST00000373063 UNC79Q9P2D8 2635 aa12.82□□□□□ -0.36
FOXP4-204ENST00000373063 ASB16-AS1Q495Z4 193 aa12.81□□□□□ -0.36
FOXP4-204ENST00000373063 KRTAP29-1A8MX34 341 aaPredicted RBP12.8□□□□□ -0.36
FOXP4-204ENST00000373063 IGSF10Q6WRI0 2623 aa12.79□□□□□ -0.36
FOXP4-204ENST00000373063 CFAP54Q96N23 3096 aa12.78□□□□□ -0.36
FOXP4-204ENST00000373063 LAMA3Q16787 3333 aa12.78□□□□□ -0.36
FOXP4-204ENST00000373063 MKI67P46013 3256 aaKnown RBP12.77□□□□□ -0.36
FOXP4-204ENST00000373063 KRTAP13-2Q52LG2 175 aa12.77□□□□□ -0.36
FOXP4-204ENST00000373063 Q5XG85 94 aa12.74□□□□□ -0.37
FOXP4-204ENST00000373063 C20orf166-AS1Q96NR2 134 aa12.72□□□□□ -0.37
FOXP4-204ENST00000373063 KRTAP7-1Q8IUC3 87 aa12.71□□□□□ -0.38
FOXP4-204ENST00000373063 A8MUU9 505 aa12.69□□□□□ -0.38
FOXP4-204ENST00000373063 GCN1Q92616 2671 aaKnown RBP12.67□□□□□ -0.38
FOXP4-204ENST00000373063 FLG2Q5D862 2391 aaPredicted RBP12.65□□□□□ -0.38
FOXP4-204ENST00000373063 NOTCH1P46531 2555 aa12.64□□□□□ -0.39
FOXP4-204ENST00000373063 DSPP15924 2871 aaKnown RBP12.62□□□□□ -0.39
FOXP4-204ENST00000373063 KRTAP13-1Q8IUC0 172 aa12.6□□□□□ -0.39
FOXP4-204ENST00000373063 WDFY4Q6ZS81 3184 aa12.6□□□□□ -0.39
FOXP4-204ENST00000373063 A0A0A0MQY5 61 aa12.59□□□□□ -0.39
FOXP4-204ENST00000373063 LAMA2P24043 3122 aaKnown RBP12.59□□□□□ -0.39
FOXP4-204ENST00000373063 ITPR2Q14571 2701 aa12.57□□□□□ -0.4
FOXP4-204ENST00000373063 BRCA2P51587 3418 aa12.53□□□□□ -0.4
FOXP4-204ENST00000373063 PRUNE2Q8WUY3 3088 aa12.53□□□□□ -0.4
FOXP4-204ENST00000373063 DMBT1Q9UGM3 2413 aaPredicted RBP12.48□□□□□ -0.41
FOXP4-204ENST00000373063 NBEAL2Q6ZNJ1 2754 aa12.44□□□□□ -0.42
FOXP4-204ENST00000373063 UBR5O95071 2799 aaPredicted RBP12.41□□□□□ -0.42
FOXP4-204ENST00000373063 A8MU10 97 aa12.4□□□□□ -0.42
FOXP4-204ENST00000373063 TRIOO75962 3097 aa12.39□□□□□ -0.43
FOXP4-204ENST00000373063 FRYQ5TBA9 3013 aa12.38□□□□□ -0.43
FOXP4-204ENST00000373063 NSD1Q96L73 2696 aaPredicted RBP12.38□□□□□ -0.43
FOXP4-204ENST00000373063 KMT2BQ9UMN6 2715 aaPredicted RBP12.35□□□□□ -0.43
FOXP4-204ENST00000373063 XIRP2A4UGR9 3374 aa12.31□□□□□ -0.44
FOXP4-204ENST00000373063 UNC80Q8N2C7 3258 aa12.29□□□□□ -0.44
FOXP4-204ENST00000373063 STAB2Q8WWQ8 2551 aa12.28□□□□□ -0.44
FOXP4-204ENST00000373063 MAP1AP78559 2803 aaPredicted RBP12.26□□□□□ -0.45
FOXP4-204ENST00000373063 A0A1B0GVY2 172 aa12.21□□□□□ -0.46
FOXP4-204ENST00000373063 TNP1P09430 55 aa12.2□□□□□ -0.46
FOXP4-204ENST00000373063 ITPR1Q14643 2758 aa12.2□□□□□ -0.46
FOXP4-204ENST00000373063 CDH23Q9H251 3354 aa12.2□□□□□ -0.46
FOXP4-204ENST00000373063 XP32Q5T750 250 aa12.2□□□□□ -0.46
FOXP4-204ENST00000373063 VPS13AQ96RL7 3174 aa12.15□□□□□ -0.46
FOXP4-204ENST00000373063 KRTAP1-4P0C5Y4 121 aa12.13□□□□□ -0.47
FOXP4-204ENST00000373063 FREM2Q5SZK8 3169 aa12.11□□□□□ -0.47
FOXP4-204ENST00000373063 HIVEP1P15822 2718 aa12.1□□□□□ -0.47
FOXP4-204ENST00000373063 KRTAP10-8P60410 259 aa12.05□□□□□ -0.48
FOXP4-204ENST00000373063 H3BS24 57 aa12.04□□□□□ -0.48
FOXP4-204ENST00000373063 TPRXLQ17RH7 258 aa12.03□□□□□ -0.48
FOXP4-204ENST00000373063 KRTAP25-1Q3LHN0 102 aa12.03□□□□□ -0.48
FOXP4-204ENST00000373063 CRYBG3Q68DQ2 2970 aa12.02□□□□□ -0.48
FOXP4-204ENST00000373063 CELSR3Q9NYQ7 3312 aa12.02□□□□□ -0.49
FOXP4-204ENST00000373063 UTP20O75691 2785 aaKnown RBP11.99□□□□□ -0.49
FOXP4-204ENST00000373063 TACC2O95359 2948 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms