RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 CEP295Q9C0D2 2601 aa8.69□□□□□ -1.02
UBR2-201ENST00000372899 CFAP46Q8IYW2 2715 aa8.67□□□□□ -1.02
UBR2-201ENST00000372899 PRRC2CQ9Y520 2896 aaKnown RBP8.66□□□□□ -1.02
UBR2-201ENST00000372899 KRTAP10-1P60331 282 aa8.64□□□□□ -1.03
UBR2-201ENST00000372899 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
UBR2-201ENST00000372899 PRAC1Q96KF2 57 aa8.61□□□□□ -1.03
UBR2-201ENST00000372899 H3BS24 57 aa8.58□□□□□ -1.04
UBR2-201ENST00000372899 KRTAP10-2P60368 255 aa8.58□□□□□ -1.04
UBR2-201ENST00000372899 HECTD1Q9ULT8 2610 aa8.56□□□□□ -1.04
UBR2-201ENST00000372899 LINC00472Q9H8W2 130 aa8.55□□□□□ -1.04
UBR2-201ENST00000372899 SPRR1AP35321 89 aa8.53□□□□□ -1.04
UBR2-201ENST00000372899 SPATA8Q6RVD6 105 aa8.51□□□□□ -1.05
UBR2-201ENST00000372899 ITPR3Q14573 2671 aa8.51□□□□□ -1.05
UBR2-201ENST00000372899 C5orf42Q9H799 3197 aa8.5□□□□□ -1.05
UBR2-201ENST00000372899 Q8NDZ9 215 aa8.5□□□□□ -1.05
UBR2-201ENST00000372899 FLNAP21333 2647 aaKnown RBP8.5□□□□□ -1.05
UBR2-201ENST00000372899 SPRR1BP22528 89 aa8.49□□□□□ -1.05
UBR2-201ENST00000372899 Q6ZR54 194 aa8.49□□□□□ -1.05
UBR2-201ENST00000372899 PANO1I0J062 215 aa8.49□□□□□ -1.05
UBR2-201ENST00000372899 HTTP42858 3142 aa8.49□□□□□ -1.05
UBR2-201ENST00000372899 A8MUU9 505 aa8.48□□□□□ -1.05
UBR2-201ENST00000372899 CHD7Q9P2D1 2997 aa8.48□□□□□ -1.05
UBR2-201ENST00000372899 DMBT1Q9UGM3 2413 aaPredicted RBP8.48□□□□□ -1.05
UBR2-201ENST00000372899 Q5VV11 94 aa8.47□□□□□ -1.05
UBR2-201ENST00000372899 KRTAP26-1Q6PEX3 210 aa8.46□□□□□ -1.06
UBR2-201ENST00000372899 MAST4O15021 2626 aa8.45□□□□□ -1.06
UBR2-201ENST00000372899 RANBP2P49792 3224 aaKnown RBP8.43□□□□□ -1.06
UBR2-201ENST00000372899 FLNBO75369 2602 aaKnown RBP8.43□□□□□ -1.06
UBR2-201ENST00000372899 MKI67P46013 3256 aaKnown RBP8.42□□□□□ -1.06
UBR2-201ENST00000372899 HELZ2Q9BYK8 2649 aaKnown RBP8.42□□□□□ -1.06
UBR2-201ENST00000372899 KRTAP1-5Q9BYS1 174 aa8.42□□□□□ -1.06
UBR2-201ENST00000372899 ATRQ13535 2644 aa8.4□□□□□ -1.06
UBR2-201ENST00000372899 STAB1Q9NY15 2570 aa8.4□□□□□ -1.07
UBR2-201ENST00000372899 AKAP13Q12802 2813 aa8.37□□□□□ -1.07
UBR2-201ENST00000372899 NBEAL1Q6ZS30 2694 aa8.37□□□□□ -1.07
UBR2-201ENST00000372899 BRCA2P51587 3418 aa8.35□□□□□ -1.07
UBR2-201ENST00000372899 TNP1P09430 55 aa8.34□□□□□ -1.07
UBR2-201ENST00000372899 LAMA2P24043 3122 aaKnown RBP8.34□□□□□ -1.08
UBR2-201ENST00000372899 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
UBR2-201ENST00000372899 LAMA3Q16787 3333 aa8.33□□□□□ -1.08
UBR2-201ENST00000372899 A0A087X002 238 aa8.32□□□□□ -1.08
UBR2-201ENST00000372899 TRANK1O15050 2925 aa8.32□□□□□ -1.08
UBR2-201ENST00000372899 CHD9Q3L8U1 2897 aa8.31□□□□□ -1.08
UBR2-201ENST00000372899 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
UBR2-201ENST00000372899 KMT2BQ9UMN6 2715 aaPredicted RBP8.27□□□□□ -1.09
UBR2-201ENST00000372899 CENPEQ02224 2701 aa8.26□□□□□ -1.09
UBR2-201ENST00000372899 ASB16-AS1Q495Z4 193 aa8.25□□□□□ -1.09
UBR2-201ENST00000372899 TEX15Q9BXT5 2789 aa8.25□□□□□ -1.09
UBR2-201ENST00000372899 Q5XG85 94 aa8.23□□□□□ -1.09
UBR2-201ENST00000372899 C10orf95Q9H7T3 257 aa8.23□□□□□ -1.09
UBR2-201ENST00000372899 PRUNE2Q8WUY3 3088 aa8.2□□□□□ -1.1
UBR2-201ENST00000372899 KRTAP10-8P60410 259 aa8.15□□□□□ -1.1
UBR2-201ENST00000372899 TRIOO75962 3097 aa8.14□□□□□ -1.11
UBR2-201ENST00000372899 CHD6Q8TD26 2715 aa8.14□□□□□ -1.11
UBR2-201ENST00000372899 A8MU10 97 aa8.13□□□□□ -1.11
UBR2-201ENST00000372899 KRTAP25-1Q3LHN0 102 aa8.12□□□□□ -1.11
UBR2-201ENST00000372899 UNC79Q9P2D8 2635 aa8.12□□□□□ -1.11
UBR2-201ENST00000372899 A0A0C4DFX4 3053 aa8.12□□□□□ -1.11
UBR2-201ENST00000372899 CYSTM1Q9H1C7 97 aa8.1□□□□□ -1.11
UBR2-201ENST00000372899 P0C880 135 aa8.08□□□□□ -1.12
UBR2-201ENST00000372899 STAB2Q8WWQ8 2551 aa8.08□□□□□ -1.12
UBR2-201ENST00000372899 UNC80Q8N2C7 3258 aa8.08□□□□□ -1.12
UBR2-201ENST00000372899 COL6A5A8TX70 2615 aa8.07□□□□□ -1.12
UBR2-201ENST00000372899 NOTCH2NLQ7Z3S9 236 aa8.06□□□□□ -1.12
UBR2-201ENST00000372899 CDH23Q9H251 3354 aa8.05□□□□□ -1.12
UBR2-201ENST00000372899 PRO2289Q9P1D8 64 aa8.05□□□□□ -1.12
UBR2-201ENST00000372899 KRTAP4-16G5E9R7 235 aaPredicted RBP8.04□□□□□ -1.12
UBR2-201ENST00000372899 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
UBR2-201ENST00000372899 XIRP2A4UGR9 3374 aa8□□□□□ -1.13
UBR2-201ENST00000372899 A0A1B0GVY2 172 aa7.99□□□□□ -1.13
UBR2-201ENST00000372899 NDUFAF8A1L188 74 aa7.99□□□□□ -1.13
UBR2-201ENST00000372899 ITPR2Q14571 2701 aa7.98□□□□□ -1.13
UBR2-201ENST00000372899 CFAP54Q96N23 3096 aa7.98□□□□□ -1.13
UBR2-201ENST00000372899 BAHCC1Q9P281 2608 aa7.97□□□□□ -1.13
UBR2-201ENST00000372899 Q6ZRN7 208 aaPredicted RBP7.96□□□□□ -1.13
UBR2-201ENST00000372899 NOTCH1P46531 2555 aa7.96□□□□□ -1.14
UBR2-201ENST00000372899 ZNF292O60281 2723 aa7.95□□□□□ -1.14
UBR2-201ENST00000372899 PP632Q6XCG6 107 aa7.94□□□□□ -1.14
UBR2-201ENST00000372899 TEP1Q99973 2627 aaKnown RBP7.94□□□□□ -1.14
UBR2-201ENST00000372899 VPS13AQ96RL7 3174 aa7.94□□□□□ -1.14
UBR2-201ENST00000372899 KRTAP10-10P60014 251 aa7.92□□□□□ -1.14
UBR2-201ENST00000372899 SETXQ7Z333 2677 aaKnown RBP7.92□□□□□ -1.14
UBR2-201ENST00000372899 WDFY4Q6ZS81 3184 aa7.91□□□□□ -1.14
UBR2-201ENST00000372899 KRTAP21-3Q3LHN1 58 aa7.91□□□□□ -1.14
UBR2-201ENST00000372899 KRTAP13-2Q52LG2 175 aa7.91□□□□□ -1.14
UBR2-201ENST00000372899 MGAQ8IWI9 3026 aa7.9□□□□□ -1.14
UBR2-201ENST00000372899 LAMA1P25391 3075 aa7.87□□□□□ -1.15
UBR2-201ENST00000372899 KRTAP11-1Q8IUC1 163 aa7.87□□□□□ -1.15
UBR2-201ENST00000372899 SZT2Q5T011 3432 aa7.86□□□□□ -1.15
UBR2-201ENST00000372899 GCN1Q92616 2671 aaKnown RBP7.82□□□□□ -1.16
UBR2-201ENST00000372899 DNAH14Q0VDD8 3507 aa7.78□□□□□ -1.16
UBR2-201ENST00000372899 A6NN06 94 aa7.75□□□□□ -1.17
UBR2-201ENST00000372899 VCANP13611 3396 aa7.75□□□□□ -1.17
UBR2-201ENST00000372899 MAP1AP78559 2803 aaPredicted RBP7.74□□□□□ -1.17
UBR2-201ENST00000372899 DSPP15924 2871 aaKnown RBP7.74□□□□□ -1.17
UBR2-201ENST00000372899 IGSF10Q6WRI0 2623 aa7.73□□□□□ -1.17
UBR2-201ENST00000372899 APCP25054 2843 aa7.73□□□□□ -1.17
UBR2-201ENST00000372899 XP32Q5T750 250 aa7.72□□□□□ -1.17
UBR2-201ENST00000372899 CELSR3Q9NYQ7 3312 aa7.71□□□□□ -1.18
UBR2-201ENST00000372899 CRYBG3Q68DQ2 2970 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms