RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 STAB1Q9NY15 2570 aa6.56□□□□□ -1.36
RPRD2-202ENST00000369068 KRTAP1-1Q07627 177 aa6.56□□□□□ -1.36
RPRD2-202ENST00000369068 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.56□□□□□ -1.36
RPRD2-202ENST00000369068 ZCCHC13Q8WW36 166 aaKnown RBP6.55□□□□□ -1.36
RPRD2-202ENST00000369068 COX6B2Q6YFQ2 88 aa6.54□□□□□ -1.36
RPRD2-202ENST00000369068 NBEAL1Q6ZS30 2694 aa6.54□□□□□ -1.36
RPRD2-202ENST00000369068 CFAP54Q96N23 3096 aa6.54□□□□□ -1.36
RPRD2-202ENST00000369068 UNC79Q9P2D8 2635 aa6.54□□□□□ -1.36
RPRD2-202ENST00000369068 NOTCH1P46531 2555 aa6.53□□□□□ -1.36
RPRD2-202ENST00000369068 SMR3BP02814 79 aaPredicted RBP6.53□□□□□ -1.36
RPRD2-202ENST00000369068 KRTAP29-1A8MX34 341 aaPredicted RBP6.51□□□□□ -1.37
RPRD2-202ENST00000369068 CHD7Q9P2D1 2997 aa6.5□□□□□ -1.37
RPRD2-202ENST00000369068 KRTAP26-1Q6PEX3 210 aa6.49□□□□□ -1.37
RPRD2-202ENST00000369068 Q6ZR54 194 aa6.49□□□□□ -1.37
RPRD2-202ENST00000369068 GCN1Q92616 2671 aaKnown RBP6.48□□□□□ -1.37
RPRD2-202ENST00000369068 A0A0A0MQY5 61 aa6.48□□□□□ -1.37
RPRD2-202ENST00000369068 PLAC8Q9NZF1 115 aa6.48□□□□□ -1.37
RPRD2-202ENST00000369068 C5orf42Q9H799 3197 aa6.47□□□□□ -1.37
RPRD2-202ENST00000369068 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
RPRD2-202ENST00000369068 DMBT1Q9UGM3 2413 aaPredicted RBP6.45□□□□□ -1.38
RPRD2-202ENST00000369068 CFAP46Q8IYW2 2715 aa6.45□□□□□ -1.38
RPRD2-202ENST00000369068 CAMK2N1Q7Z7J9 78 aa6.45□□□□□ -1.38
RPRD2-202ENST00000369068 RPL37P61927 97 aaKnown RBP6.44□□□□□ -1.38
RPRD2-202ENST00000369068 EYSQ5T1H1 3165 aa6.44□□□□□ -1.38
RPRD2-202ENST00000369068 A6NN06 94 aa6.43□□□□□ -1.38
RPRD2-202ENST00000369068 ROMO1P60602 79 aa6.43□□□□□ -1.38
RPRD2-202ENST00000369068 HELZ2Q9BYK8 2649 aaKnown RBP6.43□□□□□ -1.38
RPRD2-202ENST00000369068 LINC00483Q53H64 154 aa6.43□□□□□ -1.38
RPRD2-202ENST00000369068 HTTP42858 3142 aa6.42□□□□□ -1.38
RPRD2-202ENST00000369068 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
RPRD2-202ENST00000369068 LCE6AA0A183 80 aa6.42□□□□□ -1.38
RPRD2-202ENST00000369068 J3QL48 77 aa6.41□□□□□ -1.38
RPRD2-202ENST00000369068 REV3LO60673 3130 aa6.41□□□□□ -1.38
RPRD2-202ENST00000369068 LAMA3Q16787 3333 aa6.4□□□□□ -1.38
RPRD2-202ENST00000369068 LAMA2P24043 3122 aaKnown RBP6.39□□□□□ -1.39
RPRD2-202ENST00000369068 Q6ZSA8 131 aa6.39□□□□□ -1.39
RPRD2-202ENST00000369068 MKI67P46013 3256 aaKnown RBP6.39□□□□□ -1.39
RPRD2-202ENST00000369068 COL6A5A8TX70 2615 aa6.39□□□□□ -1.39
RPRD2-202ENST00000369068 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
RPRD2-202ENST00000369068 TEX15Q9BXT5 2789 aa6.37□□□□□ -1.39
RPRD2-202ENST00000369068 SPTBN5Q9NRC6 3674 aaKnown RBP6.37□□□□□ -1.39
RPRD2-202ENST00000369068 S4R3F8 94 aa6.37□□□□□ -1.39
RPRD2-202ENST00000369068 MUC3AQ02505 3323 aa6.36□□□□□ -1.39
RPRD2-202ENST00000369068 NBEAL2Q6ZNJ1 2754 aa6.36□□□□□ -1.39
RPRD2-202ENST00000369068 USP34Q70CQ2 3546 aa6.36□□□□□ -1.39
RPRD2-202ENST00000369068 TEP1Q99973 2627 aaKnown RBP6.35□□□□□ -1.39
RPRD2-202ENST00000369068 CHD9Q3L8U1 2897 aa6.35□□□□□ -1.39
RPRD2-202ENST00000369068 MGAQ8IWI9 3026 aa6.35□□□□□ -1.39
RPRD2-202ENST00000369068 KRTAP1-5Q9BYS1 174 aa6.35□□□□□ -1.39
RPRD2-202ENST00000369068 STAB2Q8WWQ8 2551 aa6.33□□□□□ -1.4
RPRD2-202ENST00000369068 WDFY3Q8IZQ1 3526 aa6.33□□□□□ -1.4
RPRD2-202ENST00000369068 R4GN34 69 aa6.3□□□□□ -1.4
RPRD2-202ENST00000369068 MAP1AP78559 2803 aaPredicted RBP6.3□□□□□ -1.4
RPRD2-202ENST00000369068 A8MU10 97 aa6.28□□□□□ -1.4
RPRD2-202ENST00000369068 KRTAP25-1Q3LHN0 102 aa6.28□□□□□ -1.4
RPRD2-202ENST00000369068 CDH23Q9H251 3354 aa6.28□□□□□ -1.4
RPRD2-202ENST00000369068 KRTAP16-1A8MUX0 517 aa6.27□□□□□ -1.41
RPRD2-202ENST00000369068 DMDP11532 3685 aa6.27□□□□□ -1.41
RPRD2-202ENST00000369068 XIRP2A4UGR9 3374 aa6.27□□□□□ -1.41
RPRD2-202ENST00000369068 TNRC18O15417 2968 aaPredicted RBP6.27□□□□□ -1.41
RPRD2-202ENST00000369068 A0A087X002 238 aa6.26□□□□□ -1.41
RPRD2-202ENST00000369068 NOTCH2NLQ7Z3S9 236 aa6.26□□□□□ -1.41
RPRD2-202ENST00000369068 ADM2Q7Z4H4 148 aa6.25□□□□□ -1.41
RPRD2-202ENST00000369068 RANBP2P49792 3224 aaKnown RBP6.24□□□□□ -1.41
RPRD2-202ENST00000369068 PRUNE2Q8WUY3 3088 aa6.24□□□□□ -1.41
RPRD2-202ENST00000369068 UBR5O95071 2799 aaPredicted RBP6.24□□□□□ -1.41
RPRD2-202ENST00000369068 ZNF292O60281 2723 aa6.23□□□□□ -1.41
RPRD2-202ENST00000369068 WDFY4Q6ZS81 3184 aa6.22□□□□□ -1.41
RPRD2-202ENST00000369068 FRYQ5TBA9 3013 aa6.22□□□□□ -1.41
RPRD2-202ENST00000369068 FREM2Q5SZK8 3169 aa6.22□□□□□ -1.41
RPRD2-202ENST00000369068 PANO1I0J062 215 aa6.21□□□□□ -1.41
RPRD2-202ENST00000369068 SZT2Q5T011 3432 aa6.21□□□□□ -1.42
RPRD2-202ENST00000369068 TRANK1O15050 2925 aa6.2□□□□□ -1.42
RPRD2-202ENST00000369068 SETXQ7Z333 2677 aaKnown RBP6.19□□□□□ -1.42
RPRD2-202ENST00000369068 BAHCC1Q9P281 2608 aa6.19□□□□□ -1.42
RPRD2-202ENST00000369068 ITPR1Q14643 2758 aa6.18□□□□□ -1.42
RPRD2-202ENST00000369068 MYO15AQ9UKN7 3530 aa6.18□□□□□ -1.42
RPRD2-202ENST00000369068 M0QZ58 72 aa6.18□□□□□ -1.42
RPRD2-202ENST00000369068 TRIOO75962 3097 aa6.16□□□□□ -1.42
RPRD2-202ENST00000369068 KRTAP7-1Q8IUC3 87 aa6.16□□□□□ -1.42
RPRD2-202ENST00000369068 NSD1Q96L73 2696 aaPredicted RBP6.14□□□□□ -1.43
RPRD2-202ENST00000369068 UNC80Q8N2C7 3258 aa6.14□□□□□ -1.43
RPRD2-202ENST00000369068 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
RPRD2-202ENST00000369068 RPS29P62273 56 aaKnown RBP6.14□□□□□ -1.43
RPRD2-202ENST00000369068 KRTAP10-1P60331 282 aa6.13□□□□□ -1.43
RPRD2-202ENST00000369068 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
RPRD2-202ENST00000369068 VPS13AQ96RL7 3174 aa6.12□□□□□ -1.43
RPRD2-202ENST00000369068 DSPP15924 2871 aaKnown RBP6.12□□□□□ -1.43
RPRD2-202ENST00000369068 VCANP13611 3396 aa6.11□□□□□ -1.43
RPRD2-202ENST00000369068 NBEAQ8NFP9 2946 aa6.11□□□□□ -1.43
RPRD2-202ENST00000369068 KALRNO60229 2985 aa6.11□□□□□ -1.43
RPRD2-202ENST00000369068 KRTAP10-2P60368 255 aa6.1□□□□□ -1.43
RPRD2-202ENST00000369068 DNAH14Q0VDD8 3507 aa6.1□□□□□ -1.43
RPRD2-202ENST00000369068 SEC61BP60468 96 aaKnown RBP6.08□□□□□ -1.44
RPRD2-202ENST00000369068 KRTAP13-1Q8IUC0 172 aa6.07□□□□□ -1.44
RPRD2-202ENST00000369068 M0R2T5 61 aa6.07□□□□□ -1.44
RPRD2-202ENST00000369068 ASH1LQ9NR48 2969 aaKnown RBP6.05□□□□□ -1.44
RPRD2-202ENST00000369068 A8MUU9 505 aa6.02□□□□□ -1.45
RPRD2-202ENST00000369068 DMXL2Q8TDJ6 3036 aa6.02□□□□□ -1.45
RPRD2-202ENST00000369068 COL6A3P12111 3177 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms