RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 ASB16-AS1Q495Z4 193 aa6.44□□□□□ -1.38
HIPK1-202ENST00000361587 RPL37P61927 97 aaKnown RBP6.43□□□□□ -1.38
HIPK1-202ENST00000361587 LAMA3Q16787 3333 aa6.43□□□□□ -1.38
HIPK1-202ENST00000361587 ROMO1P60602 79 aa6.43□□□□□ -1.38
HIPK1-202ENST00000361587 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
HIPK1-202ENST00000361587 H3BS24 57 aa6.42□□□□□ -1.38
HIPK1-202ENST00000361587 CYSTM1Q9H1C7 97 aa6.42□□□□□ -1.38
HIPK1-202ENST00000361587 ACANP16112 2415 aa6.39□□□□□ -1.39
HIPK1-202ENST00000361587 KRTAP26-1Q6PEX3 210 aa6.39□□□□□ -1.39
HIPK1-202ENST00000361587 POLQO75417 2590 aa6.39□□□□□ -1.39
HIPK1-202ENST00000361587 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
HIPK1-202ENST00000361587 Q6ZR54 194 aa6.36□□□□□ -1.39
HIPK1-202ENST00000361587 PRRC2CQ9Y520 2896 aaKnown RBP6.33□□□□□ -1.4
HIPK1-202ENST00000361587 A0A0C4DFX4 3053 aa6.31□□□□□ -1.4
HIPK1-202ENST00000361587 M0QZ58 72 aa6.3□□□□□ -1.4
HIPK1-202ENST00000361587 FASNP49327 2511 aaKnown RBP6.29□□□□□ -1.4
HIPK1-202ENST00000361587 CDH23Q9H251 3354 aa6.28□□□□□ -1.4
HIPK1-202ENST00000361587 OXTP01178 125 aa6.28□□□□□ -1.4
HIPK1-202ENST00000361587 LAMA2P24043 3122 aaKnown RBP6.28□□□□□ -1.4
HIPK1-202ENST00000361587 KRTAP29-1A8MX34 341 aaPredicted RBP6.28□□□□□ -1.4
HIPK1-202ENST00000361587 Q5VSD8 79 aa6.27□□□□□ -1.4
HIPK1-202ENST00000361587 KRTAP1-5Q9BYS1 174 aa6.27□□□□□ -1.41
HIPK1-202ENST00000361587 ZNF292O60281 2723 aa6.27□□□□□ -1.41
HIPK1-202ENST00000361587 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
HIPK1-202ENST00000361587 UNC80Q8N2C7 3258 aa6.25□□□□□ -1.41
HIPK1-202ENST00000361587 PLAC4Q8WY50 150 aa6.23□□□□□ -1.41
HIPK1-202ENST00000361587 KRTAP10-1P60331 282 aa6.23□□□□□ -1.41
HIPK1-202ENST00000361587 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
HIPK1-202ENST00000361587 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
HIPK1-202ENST00000361587 LCE6AA0A183 80 aa6.22□□□□□ -1.41
HIPK1-202ENST00000361587 PRUNE2Q8WUY3 3088 aa6.21□□□□□ -1.41
HIPK1-202ENST00000361587 PANO1I0J062 215 aa6.21□□□□□ -1.42
HIPK1-202ENST00000361587 RPS29P62273 56 aaKnown RBP6.2□□□□□ -1.42
HIPK1-202ENST00000361587 EPG5Q9HCE0 2579 aa6.2□□□□□ -1.42
HIPK1-202ENST00000361587 SZT2Q5T011 3432 aa6.18□□□□□ -1.42
HIPK1-202ENST00000361587 TRIOO75962 3097 aa6.18□□□□□ -1.42
HIPK1-202ENST00000361587 KRTAP10-2P60368 255 aa6.18□□□□□ -1.42
HIPK1-202ENST00000361587 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
HIPK1-202ENST00000361587 MGAM2Q2M2H8 2515 aa6.12□□□□□ -1.43
HIPK1-202ENST00000361587 KRTAP16-1A8MUX0 517 aa6.12□□□□□ -1.43
HIPK1-202ENST00000361587 A6NN06 94 aa6.11□□□□□ -1.43
HIPK1-202ENST00000361587 XIRP2A4UGR9 3374 aa6.1□□□□□ -1.43
HIPK1-202ENST00000361587 USP24Q9UPU5 2620 aa6.1□□□□□ -1.43
HIPK1-202ENST00000361587 AKAP13Q12802 2813 aa6.1□□□□□ -1.43
HIPK1-202ENST00000361587 MGAQ8IWI9 3026 aa6.1□□□□□ -1.43
HIPK1-202ENST00000361587 A0A087X002 238 aa6.1□□□□□ -1.43
HIPK1-202ENST00000361587 TNRC18O15417 2968 aaPredicted RBP6.08□□□□□ -1.44
HIPK1-202ENST00000361587 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
HIPK1-202ENST00000361587 SPTBN5Q9NRC6 3674 aaKnown RBP6.05□□□□□ -1.44
HIPK1-202ENST00000361587 LAMA1P25391 3075 aa6.05□□□□□ -1.44
HIPK1-202ENST00000361587 HECTD1Q9ULT8 2610 aa6.04□□□□□ -1.44
HIPK1-202ENST00000361587 A8MUU9 505 aa6.03□□□□□ -1.44
HIPK1-202ENST00000361587 WDFY4Q6ZS81 3184 aa6.03□□□□□ -1.44
HIPK1-202ENST00000361587 FLNAP21333 2647 aaKnown RBP6.03□□□□□ -1.44
HIPK1-202ENST00000361587 DNAH14Q0VDD8 3507 aa6.02□□□□□ -1.45
HIPK1-202ENST00000361587 REV3LO60673 3130 aa6.01□□□□□ -1.45
HIPK1-202ENST00000361587 C20orf166-AS1Q96NR2 134 aa6□□□□□ -1.45
HIPK1-202ENST00000361587 VPS13AQ96RL7 3174 aa6□□□□□ -1.45
HIPK1-202ENST00000361587 VCANP13611 3396 aa6□□□□□ -1.45
HIPK1-202ENST00000361587 A8MU10 97 aa5.99□□□□□ -1.45
HIPK1-202ENST00000361587 CFAP54Q96N23 3096 aa5.99□□□□□ -1.45
HIPK1-202ENST00000361587 Q6ZRN7 208 aaPredicted RBP5.97□□□□□ -1.45
HIPK1-202ENST00000361587 ITPR3Q14573 2671 aa5.96□□□□□ -1.45
HIPK1-202ENST00000361587 KRTAP13-1Q8IUC0 172 aa5.96□□□□□ -1.46
HIPK1-202ENST00000361587 KRTAP11-1Q8IUC1 163 aa5.95□□□□□ -1.46
HIPK1-202ENST00000361587 ATRQ13535 2644 aa5.94□□□□□ -1.46
HIPK1-202ENST00000361587 FLNBO75369 2602 aaKnown RBP5.94□□□□□ -1.46
HIPK1-202ENST00000361587 KRTAP7-1Q8IUC3 87 aa5.93□□□□□ -1.46
HIPK1-202ENST00000361587 TNP1P09430 55 aa5.92□□□□□ -1.46
HIPK1-202ENST00000361587 KRTAP13-2Q52LG2 175 aa5.92□□□□□ -1.46
HIPK1-202ENST00000361587 DSPP15924 2871 aaKnown RBP5.92□□□□□ -1.46
HIPK1-202ENST00000361587 IGSF10Q6WRI0 2623 aa5.92□□□□□ -1.46
HIPK1-202ENST00000361587 FLG2Q5D862 2391 aaPredicted RBP5.9□□□□□ -1.46
HIPK1-202ENST00000361587 NDUFAF8A1L188 74 aa5.89□□□□□ -1.47
HIPK1-202ENST00000361587 HELZ2Q9BYK8 2649 aaKnown RBP5.89□□□□□ -1.47
HIPK1-202ENST00000361587 CFAP46Q8IYW2 2715 aa5.88□□□□□ -1.47
HIPK1-202ENST00000361587 MAST4O15021 2626 aa5.88□□□□□ -1.47
HIPK1-202ENST00000361587 COL6A3P12111 3177 aa5.88□□□□□ -1.47
HIPK1-202ENST00000361587 CENPEQ02224 2701 aa5.86□□□□□ -1.47
HIPK1-202ENST00000361587 DMBT1Q9UGM3 2413 aaPredicted RBP5.86□□□□□ -1.47
HIPK1-202ENST00000361587 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
HIPK1-202ENST00000361587 EYSQ5T1H1 3165 aa5.84□□□□□ -1.48
HIPK1-202ENST00000361587 STAB1Q9NY15 2570 aa5.83□□□□□ -1.48
HIPK1-202ENST00000361587 CELSR3Q9NYQ7 3312 aa5.82□□□□□ -1.48
HIPK1-202ENST00000361587 FRYQ5TBA9 3013 aa5.81□□□□□ -1.48
HIPK1-202ENST00000361587 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
HIPK1-202ENST00000361587 NBEAL1Q6ZS30 2694 aa5.79□□□□□ -1.48
HIPK1-202ENST00000361587 UNC79Q9P2D8 2635 aa5.78□□□□□ -1.48
HIPK1-202ENST00000361587 FRYLO94915 3013 aa5.77□□□□□ -1.49
HIPK1-202ENST00000361587 DMXL2Q8TDJ6 3036 aa5.77□□□□□ -1.49
HIPK1-202ENST00000361587 BOD1L1Q8NFC6 3051 aa5.76□□□□□ -1.49
HIPK1-202ENST00000361587 USP34Q70CQ2 3546 aa5.76□□□□□ -1.49
HIPK1-202ENST00000361587 ADGRG4Q8IZF6 3080 aa5.74□□□□□ -1.49
HIPK1-202ENST00000361587 DMXL1Q9Y485 3027 aa5.73□□□□□ -1.49
HIPK1-202ENST00000361587 SPEGQ15772 3267 aa5.73□□□□□ -1.49
HIPK1-202ENST00000361587 FLNCQ14315 2725 aa5.73□□□□□ -1.49
HIPK1-202ENST00000361587 ATMQ13315 3056 aa5.72□□□□□ -1.49
HIPK1-202ENST00000361587 FREM2Q5SZK8 3169 aa5.72□□□□□ -1.49
HIPK1-202ENST00000361587 TEX15Q9BXT5 2789 aa5.71□□□□□ -1.5
HIPK1-202ENST00000361587 NBEAQ8NFP9 2946 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms