RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 TRBV7-4A0A0J9YYF1 115 aa14.03□□□□□ -0.16
SDF4-202ENST00000360001 Q6ZQT0 140 aa14.02□□□□□ -0.16
SDF4-202ENST00000360001 CCKP06307 115 aa14.01□□□□□ -0.17
SDF4-202ENST00000360001 FAM240AA0A1B0GVK7 77 aa14□□□□□ -0.17
SDF4-202ENST00000360001 ZNF706Q9Y5V0 76 aaPredicted RBP14□□□□□ -0.17
SDF4-202ENST00000360001 PDE6GP18545 87 aa13.98□□□□□ -0.17
SDF4-202ENST00000360001 LINC00483Q53H64 154 aa13.98□□□□□ -0.17
SDF4-202ENST00000360001 F8WEM9 126 aa13.96□□□□□ -0.17
SDF4-202ENST00000360001 SMR3BP02814 79 aaPredicted RBP13.96□□□□□ -0.17
SDF4-202ENST00000360001 SVIPQ8NHG7 77 aa13.96□□□□□ -0.17
SDF4-202ENST00000360001 IGLV8-61A0A075B6I0 122 aa13.94□□□□□ -0.18
SDF4-202ENST00000360001 ACYP1P07311 99 aa13.94□□□□□ -0.18
SDF4-202ENST00000360001 RPL37AP61513 92 aaKnown RBP13.94□□□□□ -0.18
SDF4-202ENST00000360001 CDIP1Q9H305 208 aa13.94□□□□□ -0.18
SDF4-202ENST00000360001 FAT1Q14517 4588 aa13.93□□□□□ -0.18
SDF4-202ENST00000360001 ANAPC11Q9NYG5 84 aa13.91□□□□□ -0.18
SDF4-202ENST00000360001 VPS25Q9BRG1 176 aa13.9□□□□□ -0.18
SDF4-202ENST00000360001 IGFL1Q6UW32 110 aa13.87□□□□□ -0.19
SDF4-202ENST00000360001 LINC00846Q9NV44 126 aa13.87□□□□□ -0.19
SDF4-202ENST00000360001 A0A0G2JQZ4 141 aa13.86□□□□□ -0.19
SDF4-202ENST00000360001 C21orf62-AS1Q17RA5 79 aa13.86□□□□□ -0.19
SDF4-202ENST00000360001 A0A1W2PNM2 257 aa13.85□□□□□ -0.19
SDF4-202ENST00000360001 EPPK1P58107 5090 aaKnown RBP13.84□□□□□ -0.19
SDF4-202ENST00000360001 IGLV9-49A0A0B4J1Y8 123 aa13.84□□□□□ -0.19
SDF4-202ENST00000360001 KRTAP10-4P60372 401 aaPredicted RBP13.84□□□□□ -0.19
SDF4-202ENST00000360001 HSPG2P98160 4391 aa13.83□□□□□ -0.2
SDF4-202ENST00000360001 CDK2AP2O75956 126 aa13.82□□□□□ -0.2
SDF4-202ENST00000360001 Q6JHZ5 121 aa13.82□□□□□ -0.2
SDF4-202ENST00000360001 Q8NBF4 154 aa13.82□□□□□ -0.2
SDF4-202ENST00000360001 C9orf153Q5TBE3 101 aa13.8□□□□□ -0.2
SDF4-202ENST00000360001 RYR1P21817 5038 aa13.8□□□□□ -0.2
SDF4-202ENST00000360001 SPINK6Q6UWN8 80 aa13.79□□□□□ -0.2
SDF4-202ENST00000360001 KRTAP1-4P0C5Y4 121 aa13.77□□□□□ -0.21
SDF4-202ENST00000360001 MOBPQ13875 183 aa13.77□□□□□ -0.21
SDF4-202ENST00000360001 CRYGAP11844 174 aa13.74□□□□□ -0.21
SDF4-202ENST00000360001 A0A1B0GW54 56 aa13.73□□□□□ -0.21
SDF4-202ENST00000360001 FAM229BQ4G0N7 80 aa13.73□□□□□ -0.21
SDF4-202ENST00000360001 A0A087X002 238 aa13.72□□□□□ -0.21
SDF4-202ENST00000360001 UBL5Q9BZL1 73 aa13.72□□□□□ -0.21
SDF4-202ENST00000360001 LINC00643Q86TS7 51 aa13.71□□□□□ -0.21
SDF4-202ENST00000360001 KIAA1109Q2LD37 5005 aa13.71□□□□□ -0.22
SDF4-202ENST00000360001 MT-ATP8P03928 68 aa13.71□□□□□ -0.22
SDF4-202ENST00000360001 Q6Q795 121 aa13.7□□□□□ -0.22
SDF4-202ENST00000360001 FAM229AH3BQW9 127 aa13.69□□□□□ -0.22
SDF4-202ENST00000360001 Q6ZVQ6 151 aa13.69□□□□□ -0.22
SDF4-202ENST00000360001 KRTAP13-2Q52LG2 175 aa13.69□□□□□ -0.22
SDF4-202ENST00000360001 PLA2G1BP04054 148 aaKnown RBP13.68□□□□□ -0.22
SDF4-202ENST00000360001 SIGMAR1Q99720 223 aa13.68□□□□□ -0.22
SDF4-202ENST00000360001 PKHD1L1Q86WI1 4243 aa13.67□□□□□ -0.22
SDF4-202ENST00000360001 SSBP3-AS1Q7Z2R9 100 aa13.64□□□□□ -0.23
SDF4-202ENST00000360001 A0A087WSZ3 146 aa13.63□□□□□ -0.23
SDF4-202ENST00000360001 Q5VSD8 79 aa13.63□□□□□ -0.23
SDF4-202ENST00000360001 TRBV7-7A0A0K0K1E9 115 aa13.62□□□□□ -0.23
SDF4-202ENST00000360001 NREPQ16612 68 aa13.62□□□□□ -0.23
SDF4-202ENST00000360001 KRTAP17-1Q9BYP8 105 aa13.62□□□□□ -0.23
SDF4-202ENST00000360001 HRCT1Q6UXD1 115 aa13.6□□□□□ -0.23
SDF4-202ENST00000360001 IGKV3D-7A0A0C4DH55 119 aa13.58□□□□□ -0.24
SDF4-202ENST00000360001 ATP5EP2Q5VTU8 51 aa13.56□□□□□ -0.24
SDF4-202ENST00000360001 PRR26Q8N8Z3 221 aa13.54□□□□□ -0.24
SDF4-202ENST00000360001 CD164Q04900 197 aa13.52□□□□□ -0.24
SDF4-202ENST00000360001 TYMSOSQ8TAI1 123 aa13.52□□□□□ -0.25
SDF4-202ENST00000360001 CXCL6P80162 114 aa13.51□□□□□ -0.25
SDF4-202ENST00000360001 Q8N1X5 172 aa13.51□□□□□ -0.25
SDF4-202ENST00000360001 BPY2O14599 106 aa13.48□□□□□ -0.25
SDF4-202ENST00000360001 IMUPQ9GZP8 106 aa13.48□□□□□ -0.25
SDF4-202ENST00000360001 LINC00472Q9H8W2 130 aa13.45□□□□□ -0.26
SDF4-202ENST00000360001 SS18L2Q9UHA2 77 aa13.45□□□□□ -0.26
SDF4-202ENST00000360001 DEFB116Q30KQ4 102 aa13.43□□□□□ -0.26
SDF4-202ENST00000360001 HIST1H4AP62805 103 aaKnown RBP13.4□□□□□ -0.26
SDF4-202ENST00000360001 Q96NJ1 140 aa13.4□□□□□ -0.26
SDF4-202ENST00000360001 DSCR10P59022 87 aa13.4□□□□□ -0.27
SDF4-202ENST00000360001 Q8N9L7 120 aa13.38□□□□□ -0.27
SDF4-202ENST00000360001 A0A087WVE0 104 aa13.38□□□□□ -0.27
SDF4-202ENST00000360001 LRP1Q07954 4544 aaKnown RBP13.37□□□□□ -0.27
SDF4-202ENST00000360001 C4orf48Q5BLP8 95 aa13.36□□□□□ -0.27
SDF4-202ENST00000360001 LINC00304Q8N9R0 145 aa13.36□□□□□ -0.27
SDF4-202ENST00000360001 Q5XG85 94 aa13.35□□□□□ -0.27
SDF4-202ENST00000360001 IGKV4-1P06312 121 aa13.34□□□□□ -0.27
SDF4-202ENST00000360001 BIRC6Q9NR09 4857 aa13.34□□□□□ -0.27
SDF4-202ENST00000360001 FAT3Q8TDW7 4589 aa13.33□□□□□ -0.28
SDF4-202ENST00000360001 SPINK1P00995 79 aa13.33□□□□□ -0.28
SDF4-202ENST00000360001 SCGB1A1P11684 91 aa13.33□□□□□ -0.28
SDF4-202ENST00000360001 ASB16-AS1Q495Z4 193 aa13.33□□□□□ -0.28
SDF4-202ENST00000360001 K7EQZ3 153 aa13.31□□□□□ -0.28
SDF4-202ENST00000360001 J3KT08 172 aa13.31□□□□□ -0.28
SDF4-202ENST00000360001 SPAG11AQ6PDA7 123 aa13.31□□□□□ -0.28
SDF4-202ENST00000360001 TNXBP22105 4242 aa13.3□□□□□ -0.28
SDF4-202ENST00000360001 LIMD2Q9BT23 127 aa13.29□□□□□ -0.28
SDF4-202ENST00000360001 FLG2Q5D862 2391 aaPredicted RBP13.28□□□□□ -0.28
SDF4-202ENST00000360001 FAM236AA0A1B0GUQ0 79 aa13.27□□□□□ -0.28
SDF4-202ENST00000360001 FAM236BA0A1B0GV22 79 aa13.27□□□□□ -0.28
SDF4-202ENST00000360001 A8MWP4 228 aa13.27□□□□□ -0.29
SDF4-202ENST00000360001 KRTAP10-8P60410 259 aa13.27□□□□□ -0.29
SDF4-202ENST00000360001 RPS29P62273 56 aaKnown RBP13.25□□□□□ -0.29
SDF4-202ENST00000360001 KRTAP4-5Q9BYR2 181 aa13.25□□□□□ -0.29
SDF4-202ENST00000360001 C1orf195Q5TG92 126 aa13.23□□□□□ -0.29
SDF4-202ENST00000360001 MYCBP2O75592 4640 aa13.23□□□□□ -0.29
SDF4-202ENST00000360001 PRR15Q8IV56 129 aa13.22□□□□□ -0.29
SDF4-202ENST00000360001 HERC2O95714 4834 aa13.18□□□□□ -0.3
SDF4-202ENST00000360001 NDUFB1O75438 58 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms