RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PHF5AQ7RTV0 110 aaKnown RBP4.31□□□□□ -1.72
VPS13B-202ENST00000357162 Q5XG85 94 aa4.31□□□□□ -1.72
VPS13B-202ENST00000357162 PCNTO95613 3336 aa4.31□□□□□ -1.72
VPS13B-202ENST00000357162 RBM12B-AS1Q9P1G2 102 aa4.31□□□□□ -1.72
VPS13B-202ENST00000357162 ZNF861PO60384 105 aa4.31□□□□□ -1.72
VPS13B-202ENST00000357162 LAMA1P25391 3075 aa4.31□□□□□ -1.72
VPS13B-202ENST00000357162 DEFB116Q30KQ4 102 aa4.29□□□□□ -1.72
VPS13B-202ENST00000357162 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
VPS13B-202ENST00000357162 Q9UF83 564 aa4.29□□□□□ -1.72
VPS13B-202ENST00000357162 FAM229BQ4G0N7 80 aa4.28□□□□□ -1.72
VPS13B-202ENST00000357162 FP248Q71RG6 208 aaPredicted RBP4.28□□□□□ -1.73
VPS13B-202ENST00000357162 LINC00588Q9Y4M8 146 aa4.27□□□□□ -1.73
VPS13B-202ENST00000357162 C9orf163Q8N9P6 203 aa4.27□□□□□ -1.73
VPS13B-202ENST00000357162 EIF4EBP3O60516 100 aaPredicted RBP4.26□□□□□ -1.73
VPS13B-202ENST00000357162 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
VPS13B-202ENST00000357162 OXLD1Q5BKU9 147 aa4.26□□□□□ -1.73
VPS13B-202ENST00000357162 CHTF8P0CG12 524 aa4.26□□□□□ -1.73
VPS13B-202ENST00000357162 A0A1W2PNM2 257 aa4.25□□□□□ -1.73
VPS13B-202ENST00000357162 ATMQ13315 3056 aa4.25□□□□□ -1.73
VPS13B-202ENST00000357162 C9orf129Q5T035 196 aaKnown RBP4.25□□□□□ -1.73
VPS13B-202ENST00000357162 TYMSOSQ8TAI1 123 aa4.25□□□□□ -1.73
VPS13B-202ENST00000357162 LY6G6CO95867 125 aa4.25□□□□□ -1.73
VPS13B-202ENST00000357162 WDFY4Q6ZS81 3184 aa4.25□□□□□ -1.73
VPS13B-202ENST00000357162 LINC00304Q8N9R0 145 aa4.24□□□□□ -1.73
VPS13B-202ENST00000357162 GIG44P09565 113 aaPredicted RBP4.24□□□□□ -1.73
VPS13B-202ENST00000357162 C5orf42Q9H799 3197 aa4.24□□□□□ -1.73
VPS13B-202ENST00000357162 DSCR10P59022 87 aa4.24□□□□□ -1.73
VPS13B-202ENST00000357162 PLA2G1BP04054 148 aaKnown RBP4.24□□□□□ -1.73
VPS13B-202ENST00000357162 COL7A1Q02388 2944 aa4.24□□□□□ -1.73
VPS13B-202ENST00000357162 C19orf73Q9NVV2 129 aa4.24□□□□□ -1.73
VPS13B-202ENST00000357162 SPACA4Q8TDM5 124 aa4.24□□□□□ -1.73
VPS13B-202ENST00000357162 SPRR1BP22528 89 aa4.24□□□□□ -1.73
VPS13B-202ENST00000357162 RTL8CO15255 209 aa4.23□□□□□ -1.73
VPS13B-202ENST00000357162 SPRR1AP35321 89 aa4.23□□□□□ -1.73
VPS13B-202ENST00000357162 M0R2N4 97 aa4.23□□□□□ -1.73
VPS13B-202ENST00000357162 Q5VV11 94 aa4.23□□□□□ -1.73
VPS13B-202ENST00000357162 REV3LO60673 3130 aa4.22□□□□□ -1.73
VPS13B-202ENST00000357162 A0A1B0GU33 70 aa4.22□□□□□ -1.73
VPS13B-202ENST00000357162 A0A096LNT2 108 aa4.22□□□□□ -1.73
VPS13B-202ENST00000357162 Q96NJ1 140 aa4.2□□□□□ -1.74
VPS13B-202ENST00000357162 FREM2Q5SZK8 3169 aa4.2□□□□□ -1.74
VPS13B-202ENST00000357162 ADGRG4Q8IZF6 3080 aa4.2□□□□□ -1.74
VPS13B-202ENST00000357162 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
VPS13B-202ENST00000357162 COX6B2Q6YFQ2 88 aa4.19□□□□□ -1.74
VPS13B-202ENST00000357162 Q6ZR54 194 aa4.19□□□□□ -1.74
VPS13B-202ENST00000357162 ZNF575Q86XF7 245 aa4.19□□□□□ -1.74
VPS13B-202ENST00000357162 FBN1P35555 2871 aaKnown RBP4.18□□□□□ -1.74
VPS13B-202ENST00000357162 BOD1L1Q8NFC6 3051 aa4.18□□□□□ -1.74
VPS13B-202ENST00000357162 HRNRQ86YZ3 2850 aaPredicted RBP4.18□□□□□ -1.74
VPS13B-202ENST00000357162 LINC00472Q9H8W2 130 aa4.17□□□□□ -1.74
VPS13B-202ENST00000357162 FAM168BA1KXE4 195 aa4.17□□□□□ -1.74
VPS13B-202ENST00000357162 LCE6AA0A183 80 aa4.16□□□□□ -1.74
VPS13B-202ENST00000357162 RANBP2P49792 3224 aaKnown RBP4.15□□□□□ -1.74
VPS13B-202ENST00000357162 IGLV7-43P04211 117 aa4.15□□□□□ -1.74
VPS13B-202ENST00000357162 ZCCHC13Q8WW36 166 aaKnown RBP4.15□□□□□ -1.75
VPS13B-202ENST00000357162 H3BS24 57 aa4.14□□□□□ -1.75
VPS13B-202ENST00000357162 PSORS1C2Q9UIG4 136 aa4.14□□□□□ -1.75
VPS13B-202ENST00000357162 MMP24-AS1A0A0U1RRL7 71 aa4.13□□□□□ -1.75
VPS13B-202ENST00000357162 HRES1P13985 223 aa4.13□□□□□ -1.75
VPS13B-202ENST00000357162 KRTAP10-9P60411 292 aa4.13□□□□□ -1.75
VPS13B-202ENST00000357162 A0A087WTM6 91 aa4.12□□□□□ -1.75
VPS13B-202ENST00000357162 HTTP42858 3142 aa4.12□□□□□ -1.75
VPS13B-202ENST00000357162 APLNQ9ULZ1 77 aa4.12□□□□□ -1.75
VPS13B-202ENST00000357162 CELSR1Q9NYQ6 3014 aa4.11□□□□□ -1.75
VPS13B-202ENST00000357162 WWC2-AS2Q96NR7 200 aa4.1□□□□□ -1.75
VPS13B-202ENST00000357162 SPATA8Q6RVD6 105 aa4.1□□□□□ -1.75
VPS13B-202ENST00000357162 PRR26Q8N8Z3 221 aa4.09□□□□□ -1.75
VPS13B-202ENST00000357162 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.75
VPS13B-202ENST00000357162 RPL37P61927 97 aaKnown RBP4.08□□□□□ -1.76
VPS13B-202ENST00000357162 RPS29P62273 56 aaKnown RBP4.08□□□□□ -1.76
VPS13B-202ENST00000357162 BRCA2P51587 3418 aa4.08□□□□□ -1.76
VPS13B-202ENST00000357162 ROMO1P60602 79 aa4.07□□□□□ -1.76
VPS13B-202ENST00000357162 CYSTM1Q9H1C7 97 aa4.07□□□□□ -1.76
VPS13B-202ENST00000357162 CSAG1Q6PB30 78 aa4.06□□□□□ -1.76
VPS13B-202ENST00000357162 Q5W150 140 aa4.06□□□□□ -1.76
VPS13B-202ENST00000357162 KRTAP29-1A8MX34 341 aaPredicted RBP4.05□□□□□ -1.76
VPS13B-202ENST00000357162 PLAC8Q9NZF1 115 aa4.05□□□□□ -1.76
VPS13B-202ENST00000357162 A6NN06 94 aa4.04□□□□□ -1.76
VPS13B-202ENST00000357162 ANAPC11Q9NYG5 84 aa4.03□□□□□ -1.76
VPS13B-202ENST00000357162 A0A1W2PNN7 141 aa4.03□□□□□ -1.76
VPS13B-202ENST00000357162 SMR3AQ99954 134 aa4.03□□□□□ -1.76
VPS13B-202ENST00000357162 OXTP01178 125 aa4.03□□□□□ -1.76
VPS13B-202ENST00000357162 K7EIL1 84 aa4.02□□□□□ -1.77
VPS13B-202ENST00000357162 KRTAP4-16G5E9R7 235 aaPredicted RBP4.02□□□□□ -1.77
VPS13B-202ENST00000357162 KRTAP16-1A8MUX0 517 aa4.01□□□□□ -1.77
VPS13B-202ENST00000357162 MKI67P46013 3256 aaKnown RBP4.01□□□□□ -1.77
VPS13B-202ENST00000357162 SPINK7P58062 85 aa4.01□□□□□ -1.77
VPS13B-202ENST00000357162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4□□□□□ -1.77
VPS13B-202ENST00000357162 MEGF8Q7Z7M0 2845 aa4□□□□□ -1.77
VPS13B-202ENST00000357162 KRTAP24-1Q3LI83 254 aa4□□□□□ -1.77
VPS13B-202ENST00000357162 Q8N1X5 172 aa4□□□□□ -1.77
VPS13B-202ENST00000357162 M0QZ58 72 aa3.99□□□□□ -1.77
VPS13B-202ENST00000357162 NOTCH2NLQ7Z3S9 236 aa3.99□□□□□ -1.77
VPS13B-202ENST00000357162 S4R3F8 94 aa3.98□□□□□ -1.77
VPS13B-202ENST00000357162 H1FX-AS1Q4G0G2 97 aa3.98□□□□□ -1.77
VPS13B-202ENST00000357162 KRTAP10-11P60412 298 aa3.97□□□□□ -1.77
VPS13B-202ENST00000357162 PANO1I0J062 215 aa3.97□□□□□ -1.77
VPS13B-202ENST00000357162 Q6ZSA8 131 aa3.96□□□□□ -1.78
VPS13B-202ENST00000357162 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
VPS13B-202ENST00000357162 A0A0D9SG42 100 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms