RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SPRR1AP35321 89 aa7.16□□□□□ -1.26
SPTBN1-202ENST00000356805 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.15□□□□□ -1.27
SPTBN1-202ENST00000356805 ZCCHC13Q8WW36 166 aaKnown RBP7.13□□□□□ -1.27
SPTBN1-202ENST00000356805 CENPEQ02224 2701 aa7.13□□□□□ -1.27
SPTBN1-202ENST00000356805 STAB1Q9NY15 2570 aa7.12□□□□□ -1.27
SPTBN1-202ENST00000356805 SPRR1BP22528 89 aa7.12□□□□□ -1.27
SPTBN1-202ENST00000356805 LINC00472Q9H8W2 130 aa7.12□□□□□ -1.27
SPTBN1-202ENST00000356805 FLNBO75369 2602 aaKnown RBP7.11□□□□□ -1.27
SPTBN1-202ENST00000356805 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
SPTBN1-202ENST00000356805 DMBT1Q9UGM3 2413 aaPredicted RBP7.09□□□□□ -1.28
SPTBN1-202ENST00000356805 NOTCH1P46531 2555 aa7.09□□□□□ -1.28
SPTBN1-202ENST00000356805 A0A087X002 238 aa7.06□□□□□ -1.28
SPTBN1-202ENST00000356805 ROMO1P60602 79 aa7.05□□□□□ -1.28
SPTBN1-202ENST00000356805 ITPR3Q14573 2671 aa7.05□□□□□ -1.28
SPTBN1-202ENST00000356805 PCNTO95613 3336 aa7.05□□□□□ -1.28
SPTBN1-202ENST00000356805 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
SPTBN1-202ENST00000356805 Q6ZR54 194 aa7.04□□□□□ -1.28
SPTBN1-202ENST00000356805 CHD6Q8TD26 2715 aa7.04□□□□□ -1.28
SPTBN1-202ENST00000356805 CFAP46Q8IYW2 2715 aa7.04□□□□□ -1.28
SPTBN1-202ENST00000356805 UNC79Q9P2D8 2635 aa7.03□□□□□ -1.28
SPTBN1-202ENST00000356805 Q5W150 140 aa7.03□□□□□ -1.28
SPTBN1-202ENST00000356805 M0QZ58 72 aa7.02□□□□□ -1.28
SPTBN1-202ENST00000356805 RPL37P61927 97 aaKnown RBP7.02□□□□□ -1.29
SPTBN1-202ENST00000356805 SEC61BP60468 96 aaKnown RBP7.02□□□□□ -1.29
SPTBN1-202ENST00000356805 GCN1Q92616 2671 aaKnown RBP7.02□□□□□ -1.29
SPTBN1-202ENST00000356805 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
SPTBN1-202ENST00000356805 HELZ2Q9BYK8 2649 aaKnown RBP6.99□□□□□ -1.29
SPTBN1-202ENST00000356805 A6NN06 94 aa6.99□□□□□ -1.29
SPTBN1-202ENST00000356805 Q5VSD8 79 aa6.98□□□□□ -1.29
SPTBN1-202ENST00000356805 CFAP54Q96N23 3096 aa6.97□□□□□ -1.29
SPTBN1-202ENST00000356805 PLAC8Q9NZF1 115 aa6.96□□□□□ -1.29
SPTBN1-202ENST00000356805 ADM2Q7Z4H4 148 aa6.95□□□□□ -1.3
SPTBN1-202ENST00000356805 Q8NDZ9 215 aa6.95□□□□□ -1.3
SPTBN1-202ENST00000356805 KRTAP1-3Q8IUG1 177 aa6.95□□□□□ -1.3
SPTBN1-202ENST00000356805 LCE6AA0A183 80 aa6.94□□□□□ -1.3
SPTBN1-202ENST00000356805 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
SPTBN1-202ENST00000356805 COL6A5A8TX70 2615 aa6.92□□□□□ -1.3
SPTBN1-202ENST00000356805 STAB2Q8WWQ8 2551 aa6.91□□□□□ -1.3
SPTBN1-202ENST00000356805 XIRP2A4UGR9 3374 aa6.9□□□□□ -1.3
SPTBN1-202ENST00000356805 KRTAP26-1Q6PEX3 210 aa6.89□□□□□ -1.31
SPTBN1-202ENST00000356805 KRTAP1-1Q07627 177 aa6.88□□□□□ -1.31
SPTBN1-202ENST00000356805 KRTAP25-1Q3LHN0 102 aa6.86□□□□□ -1.31
SPTBN1-202ENST00000356805 KRTAP4-16G5E9R7 235 aaPredicted RBP6.83□□□□□ -1.32
SPTBN1-202ENST00000356805 C20orf166-AS1Q96NR2 134 aa6.83□□□□□ -1.32
SPTBN1-202ENST00000356805 A0A0C4DFX4 3053 aa6.82□□□□□ -1.32
SPTBN1-202ENST00000356805 TEX15Q9BXT5 2789 aa6.81□□□□□ -1.32
SPTBN1-202ENST00000356805 LAMA2P24043 3122 aaKnown RBP6.79□□□□□ -1.32
SPTBN1-202ENST00000356805 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
SPTBN1-202ENST00000356805 KRTAP10-2P60368 255 aa6.77□□□□□ -1.33
SPTBN1-202ENST00000356805 TEP1Q99973 2627 aaKnown RBP6.76□□□□□ -1.33
SPTBN1-202ENST00000356805 MKI67P46013 3256 aaKnown RBP6.75□□□□□ -1.33
SPTBN1-202ENST00000356805 KRTAP1-5Q9BYS1 174 aa6.73□□□□□ -1.33
SPTBN1-202ENST00000356805 CELSR3Q9NYQ7 3312 aa6.72□□□□□ -1.33
SPTBN1-202ENST00000356805 PANO1I0J062 215 aa6.71□□□□□ -1.33
SPTBN1-202ENST00000356805 REV3LO60673 3130 aa6.71□□□□□ -1.33
SPTBN1-202ENST00000356805 FREM2Q5SZK8 3169 aa6.7□□□□□ -1.34
SPTBN1-202ENST00000356805 A8MUU9 505 aa6.68□□□□□ -1.34
SPTBN1-202ENST00000356805 NBEAL2Q6ZNJ1 2754 aa6.67□□□□□ -1.34
SPTBN1-202ENST00000356805 ZNF292O60281 2723 aa6.67□□□□□ -1.34
SPTBN1-202ENST00000356805 TRIOO75962 3097 aa6.66□□□□□ -1.34
SPTBN1-202ENST00000356805 ITPR1Q14643 2758 aa6.65□□□□□ -1.35
SPTBN1-202ENST00000356805 NSD1Q96L73 2696 aaPredicted RBP6.64□□□□□ -1.35
SPTBN1-202ENST00000356805 NDUFAF8A1L188 74 aa6.64□□□□□ -1.35
SPTBN1-202ENST00000356805 RPS29P62273 56 aaKnown RBP6.63□□□□□ -1.35
SPTBN1-202ENST00000356805 A8MU10 97 aa6.63□□□□□ -1.35
SPTBN1-202ENST00000356805 BAHCC1Q9P281 2608 aa6.63□□□□□ -1.35
SPTBN1-202ENST00000356805 SETXQ7Z333 2677 aaKnown RBP6.63□□□□□ -1.35
SPTBN1-202ENST00000356805 RANBP2P49792 3224 aaKnown RBP6.61□□□□□ -1.35
SPTBN1-202ENST00000356805 MAP1AP78559 2803 aaPredicted RBP6.6□□□□□ -1.35
SPTBN1-202ENST00000356805 KMT2BQ9UMN6 2715 aaPredicted RBP6.6□□□□□ -1.35
SPTBN1-202ENST00000356805 DNAH14Q0VDD8 3507 aa6.6□□□□□ -1.35
SPTBN1-202ENST00000356805 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
SPTBN1-202ENST00000356805 MGAQ8IWI9 3026 aa6.57□□□□□ -1.36
SPTBN1-202ENST00000356805 NOTCH2NLQ7Z3S9 236 aa6.56□□□□□ -1.36
SPTBN1-202ENST00000356805 VPS13AQ96RL7 3174 aa6.55□□□□□ -1.36
SPTBN1-202ENST00000356805 APCP25054 2843 aa6.55□□□□□ -1.36
SPTBN1-202ENST00000356805 KRTAP11-1Q8IUC1 163 aa6.55□□□□□ -1.36
SPTBN1-202ENST00000356805 UBR5O95071 2799 aaPredicted RBP6.53□□□□□ -1.36
SPTBN1-202ENST00000356805 ITPR2Q14571 2701 aa6.51□□□□□ -1.37
SPTBN1-202ENST00000356805 WDFY4Q6ZS81 3184 aa6.51□□□□□ -1.37
SPTBN1-202ENST00000356805 TNP1P09430 55 aa6.51□□□□□ -1.37
SPTBN1-202ENST00000356805 BRCA2P51587 3418 aa6.5□□□□□ -1.37
SPTBN1-202ENST00000356805 CHD7Q9P2D1 2997 aa6.5□□□□□ -1.37
SPTBN1-202ENST00000356805 PP632Q6XCG6 107 aa6.48□□□□□ -1.37
SPTBN1-202ENST00000356805 FRYQ5TBA9 3013 aa6.47□□□□□ -1.37
SPTBN1-202ENST00000356805 UTP20O75691 2785 aaKnown RBP6.47□□□□□ -1.37
SPTBN1-202ENST00000356805 PRUNE2Q8WUY3 3088 aa6.47□□□□□ -1.37
SPTBN1-202ENST00000356805 IGSF10Q6WRI0 2623 aa6.46□□□□□ -1.38
SPTBN1-202ENST00000356805 LAMA3Q16787 3333 aa6.46□□□□□ -1.38
SPTBN1-202ENST00000356805 UNC80Q8N2C7 3258 aa6.46□□□□□ -1.38
SPTBN1-202ENST00000356805 CRYBG3Q68DQ2 2970 aa6.44□□□□□ -1.38
SPTBN1-202ENST00000356805 KRTAP13-1Q8IUC0 172 aa6.42□□□□□ -1.38
SPTBN1-202ENST00000356805 KALRNO60229 2985 aa6.4□□□□□ -1.38
SPTBN1-202ENST00000356805 TRANK1O15050 2925 aa6.4□□□□□ -1.38
SPTBN1-202ENST00000356805 CDH23Q9H251 3354 aa6.39□□□□□ -1.39
SPTBN1-202ENST00000356805 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
SPTBN1-202ENST00000356805 DSPP15924 2871 aaKnown RBP6.37□□□□□ -1.39
SPTBN1-202ENST00000356805 NIPBLQ6KC79 2804 aaeCLIP6.34□□□□□ -1.391e-5■■■■□ 22.3
SPTBN1-202ENST00000356805 COL6A3P12111 3177 aa6.34□□□□□ -1.4
SPTBN1-202ENST00000356805 SZT2Q5T011 3432 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms