RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 FAT1Q14517 4588 aa10.99□□□□□ -0.65
SMARCD3-202ENST00000356800 SMIM29Q86T20 159 aa10.98□□□□□ -0.65
SMARCD3-202ENST00000356800 TRBV7-4A0A0J9YYF1 115 aa10.98□□□□□ -0.65
SMARCD3-202ENST00000356800 CCKP06307 115 aa10.98□□□□□ -0.65
SMARCD3-202ENST00000356800 ACYP1P07311 99 aa10.98□□□□□ -0.65
SMARCD3-202ENST00000356800 HSPG2P98160 4391 aa10.97□□□□□ -0.65
SMARCD3-202ENST00000356800 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
SMARCD3-202ENST00000356800 Q6ZQT0 140 aa10.97□□□□□ -0.65
SMARCD3-202ENST00000356800 C3orf22Q8N5N4 141 aa10.97□□□□□ -0.65
SMARCD3-202ENST00000356800 RYR1P21817 5038 aa10.96□□□□□ -0.65
SMARCD3-202ENST00000356800 CDK2AP2O75956 126 aa10.96□□□□□ -0.65
SMARCD3-202ENST00000356800 GAGE2AQ6NT46 116 aa10.96□□□□□ -0.65
SMARCD3-202ENST00000356800 SPRR4Q96PI1 79 aa10.95□□□□□ -0.66
SMARCD3-202ENST00000356800 C21orf62-AS1Q17RA5 79 aa10.95□□□□□ -0.66
SMARCD3-202ENST00000356800 KRTAP10-4P60372 401 aaPredicted RBP10.94□□□□□ -0.66
SMARCD3-202ENST00000356800 ZNF706Q9Y5V0 76 aaPredicted RBP10.94□□□□□ -0.66
SMARCD3-202ENST00000356800 VPS25Q9BRG1 176 aa10.93□□□□□ -0.66
SMARCD3-202ENST00000356800 CDIP1Q9H305 208 aa10.93□□□□□ -0.66
SMARCD3-202ENST00000356800 LINC00483Q53H64 154 aa10.92□□□□□ -0.66
SMARCD3-202ENST00000356800 F8WEM9 126 aa10.91□□□□□ -0.66
SMARCD3-202ENST00000356800 KIAA1109Q2LD37 5005 aa10.9□□□□□ -0.66
SMARCD3-202ENST00000356800 IGLV8-61A0A075B6I0 122 aa10.9□□□□□ -0.66
SMARCD3-202ENST00000356800 ANAPC11Q9NYG5 84 aa10.88□□□□□ -0.67
SMARCD3-202ENST00000356800 KRTAP17-1Q9BYP8 105 aa10.86□□□□□ -0.67
SMARCD3-202ENST00000356800 LINC00846Q9NV44 126 aa10.85□□□□□ -0.67
SMARCD3-202ENST00000356800 SPINK6Q6UWN8 80 aa10.83□□□□□ -0.68
SMARCD3-202ENST00000356800 PKHD1L1Q86WI1 4243 aa10.83□□□□□ -0.68
SMARCD3-202ENST00000356800 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
SMARCD3-202ENST00000356800 Q6JHZ5 121 aa10.82□□□□□ -0.68
SMARCD3-202ENST00000356800 A0A1B0GW54 56 aa10.81□□□□□ -0.68
SMARCD3-202ENST00000356800 KRTAP1-4P0C5Y4 121 aa10.81□□□□□ -0.68
SMARCD3-202ENST00000356800 IGFL1Q6UW32 110 aa10.81□□□□□ -0.68
SMARCD3-202ENST00000356800 Q8NBF4 154 aa10.81□□□□□ -0.68
SMARCD3-202ENST00000356800 A0A1W2PNM2 257 aa10.8□□□□□ -0.68
SMARCD3-202ENST00000356800 PLA2G1BP04054 148 aaKnown RBP10.79□□□□□ -0.68
SMARCD3-202ENST00000356800 Q5VSD8 79 aa10.79□□□□□ -0.68
SMARCD3-202ENST00000356800 IGLV9-49A0A0B4J1Y8 123 aa10.79□□□□□ -0.68
SMARCD3-202ENST00000356800 A0A0G2JQZ4 141 aa10.79□□□□□ -0.68
SMARCD3-202ENST00000356800 LINC00643Q86TS7 51 aa10.79□□□□□ -0.68
SMARCD3-202ENST00000356800 SIGMAR1Q99720 223 aa10.78□□□□□ -0.68
SMARCD3-202ENST00000356800 UBL5Q9BZL1 73 aa10.76□□□□□ -0.69
SMARCD3-202ENST00000356800 A0A087X002 238 aa10.76□□□□□ -0.69
SMARCD3-202ENST00000356800 CRYGAP11844 174 aa10.76□□□□□ -0.69
SMARCD3-202ENST00000356800 MT-ATP8P03928 68 aa10.74□□□□□ -0.69
SMARCD3-202ENST00000356800 MOBPQ13875 183 aa10.74□□□□□ -0.69
SMARCD3-202ENST00000356800 FAM229BQ4G0N7 80 aa10.74□□□□□ -0.69
SMARCD3-202ENST00000356800 C9orf153Q5TBE3 101 aa10.74□□□□□ -0.69
SMARCD3-202ENST00000356800 Q6Q795 121 aa10.73□□□□□ -0.69
SMARCD3-202ENST00000356800 Q8N1X5 172 aa10.73□□□□□ -0.69
SMARCD3-202ENST00000356800 KRTAP13-2Q52LG2 175 aa10.73□□□□□ -0.69
SMARCD3-202ENST00000356800 Q6ZVQ6 151 aa10.71□□□□□ -0.69
SMARCD3-202ENST00000356800 BIRC6Q9NR09 4857 aa10.71□□□□□ -0.7
SMARCD3-202ENST00000356800 TRBV7-7A0A0K0K1E9 115 aa10.68□□□□□ -0.7
SMARCD3-202ENST00000356800 ATP5EP2Q5VTU8 51 aa10.67□□□□□ -0.7
SMARCD3-202ENST00000356800 NREPQ16612 68 aa10.66□□□□□ -0.7
SMARCD3-202ENST00000356800 SSBP3-AS1Q7Z2R9 100 aa10.66□□□□□ -0.7
SMARCD3-202ENST00000356800 A0A087WSZ3 146 aa10.63□□□□□ -0.71
SMARCD3-202ENST00000356800 PRR26Q8N8Z3 221 aa10.63□□□□□ -0.71
SMARCD3-202ENST00000356800 IMUPQ9GZP8 106 aa10.63□□□□□ -0.71
SMARCD3-202ENST00000356800 CXCL6P80162 114 aa10.61□□□□□ -0.71
SMARCD3-202ENST00000356800 IGKV3D-7A0A0C4DH55 119 aa10.6□□□□□ -0.71
SMARCD3-202ENST00000356800 HRCT1Q6UXD1 115 aa10.6□□□□□ -0.71
SMARCD3-202ENST00000356800 CD164Q04900 197 aa10.58□□□□□ -0.72
SMARCD3-202ENST00000356800 TYMSOSQ8TAI1 123 aa10.58□□□□□ -0.72
SMARCD3-202ENST00000356800 KRTAP4-5Q9BYR2 181 aa10.58□□□□□ -0.72
SMARCD3-202ENST00000356800 LRP1Q07954 4544 aaKnown RBP10.57□□□□□ -0.72
SMARCD3-202ENST00000356800 BPY2O14599 106 aa10.55□□□□□ -0.72
SMARCD3-202ENST00000356800 SCGB1A1P11684 91 aa10.55□□□□□ -0.72
SMARCD3-202ENST00000356800 FAT3Q8TDW7 4589 aa10.55□□□□□ -0.72
SMARCD3-202ENST00000356800 HERC2O95714 4834 aa10.55□□□□□ -0.72
SMARCD3-202ENST00000356800 FLG2Q5D862 2391 aaPredicted RBP10.53□□□□□ -0.72
SMARCD3-202ENST00000356800 SS18L2Q9UHA2 77 aa10.53□□□□□ -0.72
SMARCD3-202ENST00000356800 LINC00472Q9H8W2 130 aa10.5□□□□□ -0.73
SMARCD3-202ENST00000356800 TNXBP22105 4242 aa10.5□□□□□ -0.73
SMARCD3-202ENST00000356800 HIST1H4AP62805 103 aaKnown RBP10.49□□□□□ -0.73
SMARCD3-202ENST00000356800 MYCBP2O75592 4640 aa10.47□□□□□ -0.73
SMARCD3-202ENST00000356800 KRTAP10-8P60410 259 aa10.47□□□□□ -0.73
SMARCD3-202ENST00000356800 LINC00304Q8N9R0 145 aa10.47□□□□□ -0.73
SMARCD3-202ENST00000356800 DSCR10P59022 87 aa10.46□□□□□ -0.74
SMARCD3-202ENST00000356800 A0A087WVE0 104 aa10.45□□□□□ -0.74
SMARCD3-202ENST00000356800 Q5XG85 94 aa10.45□□□□□ -0.74
SMARCD3-202ENST00000356800 Q96NJ1 140 aa10.44□□□□□ -0.74
SMARCD3-202ENST00000356800 J3KT08 172 aa10.44□□□□□ -0.74
SMARCD3-202ENST00000356800 DEFB116Q30KQ4 102 aa10.44□□□□□ -0.74
SMARCD3-202ENST00000356800 ABCA13Q86UQ4 5058 aa10.44□□□□□ -0.74
SMARCD3-202ENST00000356800 IGKV4-1P06312 121 aa10.43□□□□□ -0.74
SMARCD3-202ENST00000356800 ASB16-AS1Q495Z4 193 aa10.43□□□□□ -0.74
SMARCD3-202ENST00000356800 C4orf48Q5BLP8 95 aa10.43□□□□□ -0.74
SMARCD3-202ENST00000356800 Q8N9L7 120 aa10.43□□□□□ -0.74
SMARCD3-202ENST00000356800 FAM236AA0A1B0GUQ0 79 aa10.41□□□□□ -0.74
SMARCD3-202ENST00000356800 FAM236BA0A1B0GV22 79 aa10.41□□□□□ -0.74
SMARCD3-202ENST00000356800 SPINK1P00995 79 aa10.41□□□□□ -0.74
SMARCD3-202ENST00000356800 MT1HL1P0DM35 61 aa10.4□□□□□ -0.74
SMARCD3-202ENST00000356800 SPAG11AQ6PDA7 123 aa10.4□□□□□ -0.74
SMARCD3-202ENST00000356800 K7EQZ3 153 aa10.39□□□□□ -0.75
SMARCD3-202ENST00000356800 A8MWP4 228 aa10.38□□□□□ -0.75
SMARCD3-202ENST00000356800 RPS29P62273 56 aaKnown RBP10.38□□□□□ -0.75
SMARCD3-202ENST00000356800 LIMD2Q9BT23 127 aa10.38□□□□□ -0.75
SMARCD3-202ENST00000356800 OXTP01178 125 aa10.34□□□□□ -0.75
SMARCD3-202ENST00000356800 PRR15Q8IV56 129 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms