RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 ZNF861PO60384 105 aa13.95□□□□□ -0.18
SCAMP3-202ENST00000355379 IGLV8-61A0A075B6I0 122 aa13.95□□□□□ -0.18
SCAMP3-202ENST00000355379 A0A1B0GVY2 172 aa13.92□□□□□ -0.18
SCAMP3-202ENST00000355379 A0A1B0GW54 56 aa13.92□□□□□ -0.18
SCAMP3-202ENST00000355379 SCGB1A1P11684 91 aa13.92□□□□□ -0.18
SCAMP3-202ENST00000355379 UBL5Q9BZL1 73 aa13.92□□□□□ -0.18
SCAMP3-202ENST00000355379 ZNF706Q9Y5V0 76 aaPredicted RBP13.92□□□□□ -0.18
SCAMP3-202ENST00000355379 IGLV7-43P04211 117 aa13.91□□□□□ -0.18
SCAMP3-202ENST00000355379 Q6JHZ5 121 aa13.9□□□□□ -0.18
SCAMP3-202ENST00000355379 SPRR4Q96PI1 79 aa13.9□□□□□ -0.18
SCAMP3-202ENST00000355379 TRBV7-7A0A0K0K1E9 115 aa13.9□□□□□ -0.19
SCAMP3-202ENST00000355379 Q6Q795 121 aa13.9□□□□□ -0.19
SCAMP3-202ENST00000355379 LINC00483Q53H64 154 aa13.88□□□□□ -0.19
SCAMP3-202ENST00000355379 IMUPQ9GZP8 106 aa13.88□□□□□ -0.19
SCAMP3-202ENST00000355379 A0A1W2PNM2 257 aa13.86□□□□□ -0.19
SCAMP3-202ENST00000355379 Q8NBF4 154 aa13.86□□□□□ -0.19
SCAMP3-202ENST00000355379 RYR2Q92736 4967 aa13.85□□□□□ -0.19
SCAMP3-202ENST00000355379 ATP5EP2Q5VTU8 51 aa13.84□□□□□ -0.19
SCAMP3-202ENST00000355379 IGFL1Q6UW32 110 aa13.84□□□□□ -0.19
SCAMP3-202ENST00000355379 Q6ZVQ6 151 aa13.84□□□□□ -0.19
SCAMP3-202ENST00000355379 HAMPP81172 84 aa13.81□□□□□ -0.2
SCAMP3-202ENST00000355379 CRYGAP11844 174 aa13.79□□□□□ -0.2
SCAMP3-202ENST00000355379 IGKV3D-7A0A0C4DH55 119 aa13.78□□□□□ -0.2
SCAMP3-202ENST00000355379 RPL37AP61513 92 aaKnown RBP13.75□□□□□ -0.21
SCAMP3-202ENST00000355379 NREPQ16612 68 aa13.74□□□□□ -0.21
SCAMP3-202ENST00000355379 CXCL6P80162 114 aa13.72□□□□□ -0.21
SCAMP3-202ENST00000355379 A0A0G2JQZ4 141 aa13.71□□□□□ -0.21
SCAMP3-202ENST00000355379 LRP1BQ9NZR2 4599 aa13.71□□□□□ -0.21
SCAMP3-202ENST00000355379 PCP4P48539 62 aa13.69□□□□□ -0.22
SCAMP3-202ENST00000355379 IGLV9-49A0A0B4J1Y8 123 aa13.69□□□□□ -0.22
SCAMP3-202ENST00000355379 DYNC1H1Q14204 4646 aaKnown RBP13.68□□□□□ -0.22
SCAMP3-202ENST00000355379 KMT2CQ8NEZ4 4911 aaKnown RBP13.68□□□□□ -0.22
SCAMP3-202ENST00000355379 C9orf153Q5TBE3 101 aa13.68□□□□□ -0.22
SCAMP3-202ENST00000355379 SRRM2Q9UQ35 2752 aaKnown RBP13.68□□□□□ -0.22
SCAMP3-202ENST00000355379 PKHD1P08F94 4074 aa13.65□□□□□ -0.22
SCAMP3-202ENST00000355379 ANAPC11Q9NYG5 84 aa13.64□□□□□ -0.23
SCAMP3-202ENST00000355379 HIST1H4AP62805 103 aaKnown RBP13.61□□□□□ -0.23
SCAMP3-202ENST00000355379 MOBPQ13875 183 aa13.61□□□□□ -0.23
SCAMP3-202ENST00000355379 A0A087WSZ3 146 aa13.6□□□□□ -0.23
SCAMP3-202ENST00000355379 BPY2O14599 106 aa13.6□□□□□ -0.23
SCAMP3-202ENST00000355379 FAM236AA0A1B0GUQ0 79 aa13.58□□□□□ -0.24
SCAMP3-202ENST00000355379 FAM236BA0A1B0GV22 79 aa13.58□□□□□ -0.24
SCAMP3-202ENST00000355379 FAM229BQ4G0N7 80 aa13.58□□□□□ -0.24
SCAMP3-202ENST00000355379 A0A087WVE0 104 aa13.55□□□□□ -0.24
SCAMP3-202ENST00000355379 SSBP3-AS1Q7Z2R9 100 aa13.55□□□□□ -0.24
SCAMP3-202ENST00000355379 APOBP04114 4563 aaKnown RBP13.54□□□□□ -0.24
SCAMP3-202ENST00000355379 SPINK6Q6UWN8 80 aa13.53□□□□□ -0.24
SCAMP3-202ENST00000355379 VPS13BQ7Z7G8 4022 aa13.52□□□□□ -0.25
SCAMP3-202ENST00000355379 KRTAP1-4P0C5Y4 121 aa13.5□□□□□ -0.25
SCAMP3-202ENST00000355379 SMR3BP02814 79 aaPredicted RBP13.49□□□□□ -0.25
SCAMP3-202ENST00000355379 ANAPC13Q9BS18 74 aa13.49□□□□□ -0.25
SCAMP3-202ENST00000355379 IGKV4-1P06312 121 aa13.48□□□□□ -0.25
SCAMP3-202ENST00000355379 CD164Q04900 197 aa13.48□□□□□ -0.25
SCAMP3-202ENST00000355379 DSCR10P59022 87 aa13.46□□□□□ -0.25
SCAMP3-202ENST00000355379 SS18L2Q9UHA2 77 aa13.46□□□□□ -0.25
SCAMP3-202ENST00000355379 A0A087X002 238 aa13.45□□□□□ -0.26
SCAMP3-202ENST00000355379 ATOX1O00244 68 aa13.45□□□□□ -0.26
SCAMP3-202ENST00000355379 LINC00472Q9H8W2 130 aa13.45□□□□□ -0.26
SCAMP3-202ENST00000355379 KRTAP13-2Q52LG2 175 aa13.44□□□□□ -0.26
SCAMP3-202ENST00000355379 HRCT1Q6UXD1 115 aa13.44□□□□□ -0.26
SCAMP3-202ENST00000355379 KRTAP10-4P60372 401 aaPredicted RBP13.44□□□□□ -0.26
SCAMP3-202ENST00000355379 Q8N9L7 120 aa13.43□□□□□ -0.26
SCAMP3-202ENST00000355379 RYR3Q15413 4870 aa13.4□□□□□ -0.26
SCAMP3-202ENST00000355379 J3KT08 172 aa13.39□□□□□ -0.27
SCAMP3-202ENST00000355379 PLA2G1BP04054 148 aaKnown RBP13.39□□□□□ -0.27
SCAMP3-202ENST00000355379 DEFB116Q30KQ4 102 aa13.39□□□□□ -0.27
SCAMP3-202ENST00000355379 K7EQZ3 153 aa13.36□□□□□ -0.27
SCAMP3-202ENST00000355379 CDK2AP2O75956 126 aa13.36□□□□□ -0.27
SCAMP3-202ENST00000355379 Q96NJ1 140 aa13.36□□□□□ -0.27
SCAMP3-202ENST00000355379 A8MWP4 228 aa13.32□□□□□ -0.28
SCAMP3-202ENST00000355379 ASB16-AS1Q495Z4 193 aa13.31□□□□□ -0.28
SCAMP3-202ENST00000355379 FAM229AH3BQW9 127 aa13.3□□□□□ -0.28
SCAMP3-202ENST00000355379 TYMSOSQ8TAI1 123 aa13.29□□□□□ -0.28
SCAMP3-202ENST00000355379 PRR15Q8IV56 129 aa13.29□□□□□ -0.28
SCAMP3-202ENST00000355379 SMIM20Q8N5G0 67 aa13.29□□□□□ -0.28
SCAMP3-202ENST00000355379 Q5XG85 94 aa13.28□□□□□ -0.28
SCAMP3-202ENST00000355379 SERP2Q8N6R1 65 aa13.27□□□□□ -0.29
SCAMP3-202ENST00000355379 FAT1Q14517 4588 aa13.26□□□□□ -0.29
SCAMP3-202ENST00000355379 COX7CP15954 63 aa13.25□□□□□ -0.29
SCAMP3-202ENST00000355379 PKHD1L1Q86WI1 4243 aa13.25□□□□□ -0.29
SCAMP3-202ENST00000355379 NDUFB1O75438 58 aa13.24□□□□□ -0.29
SCAMP3-202ENST00000355379 HCG22E2RYF7 251 aa13.23□□□□□ -0.29
SCAMP3-202ENST00000355379 TRAV7A0A075B6U4 112 aa13.22□□□□□ -0.29
SCAMP3-202ENST00000355379 UQCRQO14949 82 aa13.22□□□□□ -0.29
SCAMP3-202ENST00000355379 PRR26Q8N8Z3 221 aa13.22□□□□□ -0.29
SCAMP3-202ENST00000355379 C4orf48Q5BLP8 95 aa13.21□□□□□ -0.29
SCAMP3-202ENST00000355379 LIMD2Q9BT23 127 aa13.2□□□□□ -0.3
SCAMP3-202ENST00000355379 CCDC179H3BU77 68 aa13.19□□□□□ -0.3
SCAMP3-202ENST00000355379 SPINK1P00995 79 aa13.18□□□□□ -0.3
SCAMP3-202ENST00000355379 Q5VSD8 79 aa13.16□□□□□ -0.3
SCAMP3-202ENST00000355379 SPAG11AQ6PDA7 123 aa13.16□□□□□ -0.3
SCAMP3-202ENST00000355379 HSPG2P98160 4391 aa13.16□□□□□ -0.3
SCAMP3-202ENST00000355379 A0A1B0GVX0 72 aa13.14□□□□□ -0.31
SCAMP3-202ENST00000355379 KRTAP29-1A8MX34 341 aaPredicted RBP13.14□□□□□ -0.31
SCAMP3-202ENST00000355379 RPS29P62273 56 aaKnown RBP13.14□□□□□ -0.31
SCAMP3-202ENST00000355379 LINC00304Q8N9R0 145 aa13.13□□□□□ -0.31
SCAMP3-202ENST00000355379 OCR1Q9BZK8 76 aa13.13□□□□□ -0.31
SCAMP3-202ENST00000355379 MMP24-AS1A0A0U1RRL7 71 aa13.11□□□□□ -0.31
SCAMP3-202ENST00000355379 CASC2Q6XLA1 102 aa13.11□□□□□ -0.31
SCAMP3-202ENST00000355379 WFDC13Q8IUB5 93 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms