RNA–Protein interactions for RNA: ENST00000343028.8

TM7SF3-201, Transcript of transmembrane 7 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM7SF3, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-201ENST00000343028 FUSP35637 526 aaKnown RBP eCLIP12.24□□□□□ -0.45
TM7SF3-201ENST00000343028 FAM229BQ4G0N7 80 aa12.24□□□□□ -0.45
TM7SF3-201ENST00000343028 PRKDCP78527 4128 aaKnown RBP12.23□□□□□ -0.45
TM7SF3-201ENST00000343028 TMEM254Q8TBM7 123 aa12.23□□□□□ -0.45
TM7SF3-201ENST00000343028 MPLKIPQ8TAP9 179 aa12.23□□□□□ -0.45
TM7SF3-201ENST00000343028 CNBPP62633 177 aaKnown RBP12.22□□□□□ -0.45
TM7SF3-201ENST00000343028 TNP2Q05952 138 aa12.22□□□□□ -0.45
TM7SF3-201ENST00000343028 B9D2Q9BPU9 175 aa12.22□□□□□ -0.45
TM7SF3-201ENST00000343028 ATP5EP56381 51 aaPredicted RBP12.21□□□□□ -0.45
TM7SF3-201ENST00000343028 IGKV4-1P06312 121 aa12.21□□□□□ -0.46
TM7SF3-201ENST00000343028 SMIM29Q86T20 159 aa12.19□□□□□ -0.46
TM7SF3-201ENST00000343028 LINC00476Q8WZB0 136 aa12.17□□□□□ -0.46
TM7SF3-201ENST00000343028 DYNC2H1Q8NCM8 4307 aaKnown RBP12.17□□□□□ -0.46
TM7SF3-201ENST00000343028 Q8NBF4 154 aa12.17□□□□□ -0.46
TM7SF3-201ENST00000343028 PANO1I0J062 215 aa12.17□□□□□ -0.46
TM7SF3-201ENST00000343028 TGP01266 2768 aa12.16□□□□□ -0.46
TM7SF3-201ENST00000343028 MEGF8Q7Z7M0 2845 aa12.16□□□□□ -0.46
TM7SF3-201ENST00000343028 NBDYA0A0U1RRE5 68 aa12.15□□□□□ -0.46
TM7SF3-201ENST00000343028 DEFB116Q30KQ4 102 aa12.15□□□□□ -0.46
TM7SF3-201ENST00000343028 LRCOL1A6NCL2 159 aa12.14□□□□□ -0.47
TM7SF3-201ENST00000343028 KMT2AQ03164 3969 aa12.12□□□□□ -0.47
TM7SF3-201ENST00000343028 C1orf195Q5TG92 126 aa12.12□□□□□ -0.47
TM7SF3-201ENST00000343028 IGFL1Q6UW32 110 aa12.11□□□□□ -0.47
TM7SF3-201ENST00000343028 C14orf177Q52M58 125 aa12.11□□□□□ -0.47
TM7SF3-201ENST00000343028 C9orf163Q8N9P6 203 aa12.1□□□□□ -0.47
TM7SF3-201ENST00000343028 OCR1Q9BZK8 76 aa12.09□□□□□ -0.47
TM7SF3-201ENST00000343028 SPRR4Q96PI1 79 aa12.08□□□□□ -0.48
TM7SF3-201ENST00000343028 DNHD1Q96M86 4753 aa12.08□□□□□ -0.48
TM7SF3-201ENST00000343028 NUPR2A6NF83 97 aa12.07□□□□□ -0.48
TM7SF3-201ENST00000343028 UBE2AP49459 152 aa12.07□□□□□ -0.48
TM7SF3-201ENST00000343028 Q6ZRN7 208 aaPredicted RBP12.07□□□□□ -0.48
TM7SF3-201ENST00000343028 K7EQZ3 153 aa12.06□□□□□ -0.48
TM7SF3-201ENST00000343028 A0A087WSZ3 146 aa12.05□□□□□ -0.48
TM7SF3-201ENST00000343028 DSCR10P59022 87 aa12.05□□□□□ -0.48
TM7SF3-201ENST00000343028 FAM30AQ9NZY2 134 aa12.05□□□□□ -0.48
TM7SF3-201ENST00000343028 V9GYY9 64 aa12.05□□□□□ -0.48
TM7SF3-201ENST00000343028 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.03□□□□□ -0.48
TM7SF3-201ENST00000343028 VPS13DQ5THJ4 4388 aa12□□□□□ -0.49
TM7SF3-201ENST00000343028 FRAS1Q86XX4 4008 aa12□□□□□ -0.49
TM7SF3-201ENST00000343028 HECTD4Q9Y4D8 3996 aa11.99□□□□□ -0.49
TM7SF3-201ENST00000343028 RPL37AP61513 92 aaKnown RBP11.99□□□□□ -0.49
TM7SF3-201ENST00000343028 SEC61GP60059 68 aa11.98□□□□□ -0.49
TM7SF3-201ENST00000343028 A0A1B0GW54 56 aa11.97□□□□□ -0.49
TM7SF3-201ENST00000343028 DNAH2Q9P225 4427 aa11.96□□□□□ -0.5
TM7SF3-201ENST00000343028 FBN3Q75N90 2809 aa11.94□□□□□ -0.5
TM7SF3-201ENST00000343028 A0A087WTM6 91 aa11.93□□□□□ -0.5
TM7SF3-201ENST00000343028 hDV103S1A0JD37 113 aa11.92□□□□□ -0.5
TM7SF3-201ENST00000343028 WFDC13Q8IUB5 93 aa11.92□□□□□ -0.5
TM7SF3-201ENST00000343028 IGLV8-61A0A075B6I0 122 aa11.9□□□□□ -0.5
TM7SF3-201ENST00000343028 SPACA4Q8TDM5 124 aa11.9□□□□□ -0.5
TM7SF3-201ENST00000343028 IGLV9-49A0A0B4J1Y8 123 aa11.9□□□□□ -0.5
TM7SF3-201ENST00000343028 H0Y9J4 135 aa11.88□□□□□ -0.51
TM7SF3-201ENST00000343028 C1orf64Q8NEQ6 169 aa11.88□□□□□ -0.51
TM7SF3-201ENST00000343028 RTL8CO15255 209 aa11.88□□□□□ -0.51
TM7SF3-201ENST00000343028 HCG22E2RYF7 251 aa11.87□□□□□ -0.51
TM7SF3-201ENST00000343028 ANAPC11Q9NYG5 84 aa11.86□□□□□ -0.51
TM7SF3-201ENST00000343028 KRTAP13-1Q8IUC0 172 aa11.85□□□□□ -0.51
TM7SF3-201ENST00000343028 SPRR1BP22528 89 aa11.84□□□□□ -0.51
TM7SF3-201ENST00000343028 PRR15Q8IV56 129 aa11.84□□□□□ -0.51
TM7SF3-201ENST00000343028 PSPHP1O15172 72 aa11.84□□□□□ -0.51
TM7SF3-201ENST00000343028 PRR4Q16378 134 aa11.82□□□□□ -0.52
TM7SF3-201ENST00000343028 Q1T7F1 81 aa11.82□□□□□ -0.52
TM7SF3-201ENST00000343028 LCE6AA0A183 80 aa11.81□□□□□ -0.52
TM7SF3-201ENST00000343028 PSORS1C2Q9UIG4 136 aa11.8□□□□□ -0.52
TM7SF3-201ENST00000343028 LY6G6CO95867 125 aa11.8□□□□□ -0.52
TM7SF3-201ENST00000343028 DNAH8Q96JB1 4490 aa11.8□□□□□ -0.52
TM7SF3-201ENST00000343028 DNAH6Q9C0G6 4158 aa11.8□□□□□ -0.52
TM7SF3-201ENST00000343028 PMAIP1Q13794 54 aa11.79□□□□□ -0.52
TM7SF3-201ENST00000343028 DNAH17Q9UFH2 4485 aa11.78□□□□□ -0.52
TM7SF3-201ENST00000343028 Q6ZR54 194 aa11.78□□□□□ -0.52
TM7SF3-201ENST00000343028 ZCCHC13Q8WW36 166 aaKnown RBP11.78□□□□□ -0.52
TM7SF3-201ENST00000343028 TRAV22A0A0B4J277 110 aa11.76□□□□□ -0.53
TM7SF3-201ENST00000343028 IGLV5-52A0A0A0MRZ9 124 aa11.76□□□□□ -0.53
TM7SF3-201ENST00000343028 LINC00472Q9H8W2 130 aa11.75□□□□□ -0.53
TM7SF3-201ENST00000343028 C1orf134Q5TEV5 83 aa11.73□□□□□ -0.53
TM7SF3-201ENST00000343028 MOBPQ13875 183 aa11.71□□□□□ -0.53
TM7SF3-201ENST00000343028 CASC2Q6XLA1 102 aa11.71□□□□□ -0.54
TM7SF3-201ENST00000343028 A8MWP4 228 aa11.69□□□□□ -0.54
TM7SF3-201ENST00000343028 A8MUN3 132 aa11.68□□□□□ -0.54
TM7SF3-201ENST00000343028 CYP4F30PQ9H0H9 118 aa11.67□□□□□ -0.54
TM7SF3-201ENST00000343028 A8MU10 97 aa11.67□□□□□ -0.54
TM7SF3-201ENST00000343028 KRTAP29-1A8MX34 341 aaPredicted RBP11.67□□□□□ -0.54
TM7SF3-201ENST00000343028 PLAC8Q9NZF1 115 aa11.66□□□□□ -0.54
TM7SF3-201ENST00000343028 WWC2-AS2Q96NR7 200 aa11.66□□□□□ -0.54
TM7SF3-201ENST00000343028 DNAH11Q96DT5 4516 aa11.64□□□□□ -0.55
TM7SF3-201ENST00000343028 HYDINQ4G0P3 5121 aa11.64□□□□□ -0.55
TM7SF3-201ENST00000343028 ZNF861PO60384 105 aa11.64□□□□□ -0.55
TM7SF3-201ENST00000343028 LINC00208Q96KT6 92 aa11.64□□□□□ -0.55
TM7SF3-201ENST00000343028 KRTAP10-2P60368 255 aa11.62□□□□□ -0.55
TM7SF3-201ENST00000343028 LINC00483Q53H64 154 aa11.62□□□□□ -0.55
TM7SF3-201ENST00000343028 Q96NJ1 140 aa11.62□□□□□ -0.55
TM7SF3-201ENST00000343028 DNAH5Q8TE73 4624 aa11.6□□□□□ -0.55
TM7SF3-201ENST00000343028 MMP24-AS1A0A0U1RRL7 71 aa11.59□□□□□ -0.55
TM7SF3-201ENST00000343028 MP68P56378 58 aa11.59□□□□□ -0.55
TM7SF3-201ENST00000343028 ZNF706Q9Y5V0 76 aaPredicted RBP11.59□□□□□ -0.55
TM7SF3-201ENST00000343028 H0Y9P7 68 aa11.58□□□□□ -0.56
TM7SF3-201ENST00000343028 NDUFB1O75438 58 aa11.58□□□□□ -0.56
TM7SF3-201ENST00000343028 Q5VV11 94 aa11.58□□□□□ -0.56
TM7SF3-201ENST00000343028 ALMS1Q8TCU4 4167 aa11.57□□□□□ -0.56
TM7SF3-201ENST00000343028 IGHV6-1A0A0B4J1U7 121 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms