RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 Q5VV11 94 aa9.97□□□□□ -0.81
RTL6-201ENST00000341255 A0A0C4DFX4 3053 aa9.97□□□□□ -0.81
RTL6-201ENST00000341255 SETXQ7Z333 2677 aaKnown RBP9.97□□□□□ -0.81
RTL6-201ENST00000341255 OXTP01178 125 aa9.95□□□□□ -0.82
RTL6-201ENST00000341255 PRAC1Q96KF2 57 aa9.95□□□□□ -0.82
RTL6-201ENST00000341255 NBEAL1Q6ZS30 2694 aa9.94□□□□□ -0.82
RTL6-201ENST00000341255 LINC00472Q9H8W2 130 aa9.94□□□□□ -0.82
RTL6-201ENST00000341255 CFAP54Q96N23 3096 aa9.93□□□□□ -0.82
RTL6-201ENST00000341255 RANBP2P49792 3224 aaKnown RBP9.92□□□□□ -0.82
RTL6-201ENST00000341255 ZNF292O60281 2723 aa9.92□□□□□ -0.82
RTL6-201ENST00000341255 SPRR1BP22528 89 aa9.92□□□□□ -0.82
RTL6-201ENST00000341255 COL6A5A8TX70 2615 aa9.91□□□□□ -0.82
RTL6-201ENST00000341255 MGAQ8IWI9 3026 aa9.91□□□□□ -0.82
RTL6-201ENST00000341255 SPINK7P58062 85 aa9.89□□□□□ -0.83
RTL6-201ENST00000341255 ZCCHC13Q8WW36 166 aaKnown RBP9.88□□□□□ -0.83
RTL6-201ENST00000341255 Q5W150 140 aa9.87□□□□□ -0.83
RTL6-201ENST00000341255 NOTCH1P46531 2555 aa9.86□□□□□ -0.83
RTL6-201ENST00000341255 LUZP6Q538Z0 58 aa9.85□□□□□ -0.83
RTL6-201ENST00000341255 GCN1Q92616 2671 aaKnown RBP9.85□□□□□ -0.83
RTL6-201ENST00000341255 UNC79Q9P2D8 2635 aa9.85□□□□□ -0.83
RTL6-201ENST00000341255 KRTAP1-5Q9BYS1 174 aa9.83□□□□□ -0.84
RTL6-201ENST00000341255 FLG2Q5D862 2391 aaPredicted RBP9.83□□□□□ -0.84
RTL6-201ENST00000341255 HTTP42858 3142 aa9.82□□□□□ -0.84
RTL6-201ENST00000341255 KRTAP26-1Q6PEX3 210 aa9.82□□□□□ -0.84
RTL6-201ENST00000341255 CSAG1Q6PB30 78 aa9.8□□□□□ -0.84
RTL6-201ENST00000341255 CAMK2N1Q7Z7J9 78 aa9.78□□□□□ -0.84
RTL6-201ENST00000341255 DMAC1Q96GE9 116 aa9.78□□□□□ -0.84
RTL6-201ENST00000341255 TRANK1O15050 2925 aa9.77□□□□□ -0.85
RTL6-201ENST00000341255 H3BS24 57 aa9.72□□□□□ -0.85
RTL6-201ENST00000341255 S4R3F8 94 aa9.7□□□□□ -0.86
RTL6-201ENST00000341255 WDFY4Q6ZS81 3184 aa9.7□□□□□ -0.86
RTL6-201ENST00000341255 M0R2T5 61 aa9.69□□□□□ -0.86
RTL6-201ENST00000341255 LAMA3Q16787 3333 aa9.69□□□□□ -0.86
RTL6-201ENST00000341255 MAP1AP78559 2803 aaPredicted RBP9.69□□□□□ -0.86
RTL6-201ENST00000341255 LAMA2P24043 3122 aaKnown RBP9.68□□□□□ -0.86
RTL6-201ENST00000341255 UBR5O95071 2799 aaPredicted RBP9.67□□□□□ -0.86
RTL6-201ENST00000341255 DSPP15924 2871 aaKnown RBP9.66□□□□□ -0.86
RTL6-201ENST00000341255 MKI67P46013 3256 aaKnown RBP9.66□□□□□ -0.86
RTL6-201ENST00000341255 KRTAP4-16G5E9R7 235 aaPredicted RBP9.66□□□□□ -0.86
RTL6-201ENST00000341255 KRTAP10-1P60331 282 aa9.65□□□□□ -0.86
RTL6-201ENST00000341255 NBEAL2Q6ZNJ1 2754 aa9.64□□□□□ -0.87
RTL6-201ENST00000341255 KRTAP29-1A8MX34 341 aaPredicted RBP9.63□□□□□ -0.87
RTL6-201ENST00000341255 LINC00483Q53H64 154 aa9.63□□□□□ -0.87
RTL6-201ENST00000341255 Q6ZR54 194 aa9.62□□□□□ -0.87
RTL6-201ENST00000341255 IGSF10Q6WRI0 2623 aa9.62□□□□□ -0.87
RTL6-201ENST00000341255 KRTAP10-2P60368 255 aa9.62□□□□□ -0.87
RTL6-201ENST00000341255 LCE6AA0A183 80 aa9.6□□□□□ -0.87
RTL6-201ENST00000341255 Q5VSD8 79 aa9.59□□□□□ -0.87
RTL6-201ENST00000341255 DMBT1Q9UGM3 2413 aaPredicted RBP9.59□□□□□ -0.87
RTL6-201ENST00000341255 SEC61BP60468 96 aaKnown RBP9.58□□□□□ -0.88
RTL6-201ENST00000341255 STAB2Q8WWQ8 2551 aa9.58□□□□□ -0.88
RTL6-201ENST00000341255 R4GN34 69 aa9.56□□□□□ -0.88
RTL6-201ENST00000341255 RPL37P61927 97 aaKnown RBP9.55□□□□□ -0.88
RTL6-201ENST00000341255 PANO1I0J062 215 aa9.55□□□□□ -0.88
RTL6-201ENST00000341255 ROMO1P60602 79 aa9.54□□□□□ -0.88
RTL6-201ENST00000341255 H1FX-AS1Q4G0G2 97 aa9.53□□□□□ -0.88
RTL6-201ENST00000341255 TRIOO75962 3097 aa9.52□□□□□ -0.88
RTL6-201ENST00000341255 NSD1Q96L73 2696 aaPredicted RBP9.52□□□□□ -0.89
RTL6-201ENST00000341255 BAHCC1Q9P281 2608 aa9.51□□□□□ -0.89
RTL6-201ENST00000341255 BRCA2P51587 3418 aa9.51□□□□□ -0.89
RTL6-201ENST00000341255 PRUNE2Q8WUY3 3088 aa9.49□□□□□ -0.89
RTL6-201ENST00000341255 A0A087X002 238 aa9.47□□□□□ -0.89
RTL6-201ENST00000341255 NOTCH2NLQ7Z3S9 236 aa9.47□□□□□ -0.89
RTL6-201ENST00000341255 SPATA8Q6RVD6 105 aa9.46□□□□□ -0.9
RTL6-201ENST00000341255 FRYQ5TBA9 3013 aa9.44□□□□□ -0.9
RTL6-201ENST00000341255 A0A0A0MQY5 61 aa9.44□□□□□ -0.9
RTL6-201ENST00000341255 ASB16-AS1Q495Z4 193 aa9.43□□□□□ -0.9
RTL6-201ENST00000341255 VPS13AQ96RL7 3174 aa9.41□□□□□ -0.9
RTL6-201ENST00000341255 ITPR2Q14571 2701 aa9.41□□□□□ -0.9
RTL6-201ENST00000341255 ITPR1Q14643 2758 aa9.41□□□□□ -0.9
RTL6-201ENST00000341255 UNC80Q8N2C7 3258 aa9.41□□□□□ -0.9
RTL6-201ENST00000341255 KRTAP11-1Q8IUC1 163 aa9.38□□□□□ -0.91
RTL6-201ENST00000341255 XIRP2A4UGR9 3374 aa9.38□□□□□ -0.91
RTL6-201ENST00000341255 FREM2Q5SZK8 3169 aa9.38□□□□□ -0.91
RTL6-201ENST00000341255 M0QZ58 72 aa9.37□□□□□ -0.91
RTL6-201ENST00000341255 A6NN06 94 aa9.36□□□□□ -0.91
RTL6-201ENST00000341255 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
RTL6-201ENST00000341255 Q6ZRN7 208 aaPredicted RBP9.32□□□□□ -0.92
RTL6-201ENST00000341255 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
RTL6-201ENST00000341255 FLNCQ14315 2725 aa9.31□□□□□ -0.92
RTL6-201ENST00000341255 TACC2O95359 2948 aa9.28□□□□□ -0.92
RTL6-201ENST00000341255 RPS29P62273 56 aaKnown RBP9.26□□□□□ -0.93
RTL6-201ENST00000341255 A8MU10 97 aa9.25□□□□□ -0.93
RTL6-201ENST00000341255 CELSR3Q9NYQ7 3312 aa9.24□□□□□ -0.93
RTL6-201ENST00000341255 KALRNO60229 2985 aa9.24□□□□□ -0.93
RTL6-201ENST00000341255 KRTAP25-1Q3LHN0 102 aa9.21□□□□□ -0.93
RTL6-201ENST00000341255 ATMQ13315 3056 aa9.19□□□□□ -0.94
RTL6-201ENST00000341255 UTP20O75691 2785 aaKnown RBP9.19□□□□□ -0.94
RTL6-201ENST00000341255 DMXL2Q8TDJ6 3036 aa9.18□□□□□ -0.94
RTL6-201ENST00000341255 KRTAP13-1Q8IUC0 172 aa9.17□□□□□ -0.94
RTL6-201ENST00000341255 CDH23Q9H251 3354 aa9.17□□□□□ -0.94
RTL6-201ENST00000341255 NBEAQ8NFP9 2946 aa9.15□□□□□ -0.94
RTL6-201ENST00000341255 HIVEP1P15822 2718 aa9.15□□□□□ -0.94
RTL6-201ENST00000341255 COL12A1Q99715 3063 aa9.15□□□□□ -0.94
RTL6-201ENST00000341255 PLAC4Q8WY50 150 aa9.15□□□□□ -0.95
RTL6-201ENST00000341255 KRTAP13-2Q52LG2 175 aa9.14□□□□□ -0.95
RTL6-201ENST00000341255 REV3LO60673 3130 aa9.13□□□□□ -0.95
RTL6-201ENST00000341255 KMT2BQ9UMN6 2715 aaPredicted RBP9.12□□□□□ -0.95
RTL6-201ENST00000341255 APCP25054 2843 aa9.1□□□□□ -0.95
RTL6-201ENST00000341255 NIPBLQ6KC79 2804 aaeCLIP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms