RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 MT-ATP8P03928 68 aa12.49□□□□□ -0.41
CLDND1-201ENST00000341181 FAM229AH3BQW9 127 aa12.46□□□□□ -0.41
CLDND1-201ENST00000341181 SIGMAR1Q99720 223 aa12.46□□□□□ -0.42
CLDND1-201ENST00000341181 HERC2O95714 4834 aa12.45□□□□□ -0.42
CLDND1-201ENST00000341181 LINC01547P58512 204 aaPredicted RBP12.45□□□□□ -0.42
CLDND1-201ENST00000341181 C3orf22Q8N5N4 141 aa12.45□□□□□ -0.42
CLDND1-201ENST00000341181 JMJD7-PLA2G4BH0Y9G9 81 aa12.44□□□□□ -0.42
CLDND1-201ENST00000341181 FAM240AA0A1B0GVK7 77 aa12.43□□□□□ -0.42
CLDND1-201ENST00000341181 Q8N1X5 172 aa12.43□□□□□ -0.42
CLDND1-201ENST00000341181 Q8N377 158 aa12.43□□□□□ -0.42
CLDND1-201ENST00000341181 RBM3P98179 157 aaKnown RBP12.42□□□□□ -0.42
CLDND1-201ENST00000341181 PKHD1L1Q86WI1 4243 aa12.42□□□□□ -0.42
CLDND1-201ENST00000341181 PLA2G1BP04054 148 aaKnown RBP12.42□□□□□ -0.42
CLDND1-201ENST00000341181 MYCBP2O75592 4640 aa12.4□□□□□ -0.42
CLDND1-201ENST00000341181 NDUFV3P56181 108 aaKnown RBP12.4□□□□□ -0.42
CLDND1-201ENST00000341181 CCKP06307 115 aa12.39□□□□□ -0.43
CLDND1-201ENST00000341181 LINC00846Q9NV44 126 aa12.38□□□□□ -0.43
CLDND1-201ENST00000341181 ANAPC11Q9NYG5 84 aa12.38□□□□□ -0.43
CLDND1-201ENST00000341181 LRP1Q07954 4544 aaKnown RBP12.37□□□□□ -0.43
CLDND1-201ENST00000341181 SPRR4Q96PI1 79 aa12.37□□□□□ -0.43
CLDND1-201ENST00000341181 Q6ZQT0 140 aa12.36□□□□□ -0.43
CLDND1-201ENST00000341181 IGLV5-48A0A075B6I7 105 aa12.36□□□□□ -0.43
CLDND1-201ENST00000341181 ACYP1P07311 99 aa12.36□□□□□ -0.43
CLDND1-201ENST00000341181 SPINK6Q6UWN8 80 aa12.36□□□□□ -0.43
CLDND1-201ENST00000341181 KRTAP4-5Q9BYR2 181 aa12.36□□□□□ -0.43
CLDND1-201ENST00000341181 ABCA13Q86UQ4 5058 aa12.33□□□□□ -0.43
CLDND1-201ENST00000341181 DSCR8Q96T75 97 aa12.33□□□□□ -0.44
CLDND1-201ENST00000341181 H3BQ85 93 aa12.32□□□□□ -0.44
CLDND1-201ENST00000341181 KRTAP1-4P0C5Y4 121 aa12.32□□□□□ -0.44
CLDND1-201ENST00000341181 LOC110117498A0A087WWA1 95 aa12.31□□□□□ -0.44
CLDND1-201ENST00000341181 TRBV7-4A0A0J9YYF1 115 aa12.31□□□□□ -0.44
CLDND1-201ENST00000341181 FLG2Q5D862 2391 aaPredicted RBP12.3□□□□□ -0.44
CLDND1-201ENST00000341181 GHRHP01286 108 aa12.3□□□□□ -0.44
CLDND1-201ENST00000341181 ZNF706Q9Y5V0 76 aaPredicted RBP12.3□□□□□ -0.44
CLDND1-201ENST00000341181 LINC00483Q53H64 154 aa12.29□□□□□ -0.44
CLDND1-201ENST00000341181 SMIM29Q86T20 159 aa12.29□□□□□ -0.44
CLDND1-201ENST00000341181 SPRR1BP22528 89 aa12.28□□□□□ -0.44
CLDND1-201ENST00000341181 PCP4P48539 62 aa12.28□□□□□ -0.44
CLDND1-201ENST00000341181 FAT3Q8TDW7 4589 aa12.26□□□□□ -0.45
CLDND1-201ENST00000341181 A0A087X002 238 aa12.26□□□□□ -0.45
CLDND1-201ENST00000341181 A0A0G2JQZ4 141 aa12.25□□□□□ -0.45
CLDND1-201ENST00000341181 LINC00643Q86TS7 51 aa12.23□□□□□ -0.45
CLDND1-201ENST00000341181 C21orf62-AS1Q17RA5 79 aa12.22□□□□□ -0.45
CLDND1-201ENST00000341181 IGLV9-49A0A0B4J1Y8 123 aa12.21□□□□□ -0.45
CLDND1-201ENST00000341181 IGKV3D-7A0A0C4DH55 119 aa12.21□□□□□ -0.45
CLDND1-201ENST00000341181 KRTAP13-2Q52LG2 175 aa12.19□□□□□ -0.46
CLDND1-201ENST00000341181 PDE6GP18545 87 aa12.18□□□□□ -0.46
CLDND1-201ENST00000341181 TNXBP22105 4242 aa12.18□□□□□ -0.46
CLDND1-201ENST00000341181 PRR26Q8N8Z3 221 aa12.16□□□□□ -0.46
CLDND1-201ENST00000341181 A0A1W2PNM2 257 aa12.16□□□□□ -0.46
CLDND1-201ENST00000341181 MOBPQ13875 183 aa12.16□□□□□ -0.46
CLDND1-201ENST00000341181 FAM229BQ4G0N7 80 aa12.16□□□□□ -0.46
CLDND1-201ENST00000341181 TRBV7-7A0A0K0K1E9 115 aa12.15□□□□□ -0.47
CLDND1-201ENST00000341181 C9orf153Q5TBE3 101 aa12.15□□□□□ -0.47
CLDND1-201ENST00000341181 CRYGAP11844 174 aa12.13□□□□□ -0.47
CLDND1-201ENST00000341181 F8WEM9 126 aa12.13□□□□□ -0.47
CLDND1-201ENST00000341181 Q6ZVQ6 151 aa12.13□□□□□ -0.47
CLDND1-201ENST00000341181 UBL5Q9BZL1 73 aa12.12□□□□□ -0.47
CLDND1-201ENST00000341181 SCGB1A1P11684 91 aa12.11□□□□□ -0.47
CLDND1-201ENST00000341181 Q6JHZ5 121 aa12.1□□□□□ -0.47
CLDND1-201ENST00000341181 IGFL1Q6UW32 110 aa12.1□□□□□ -0.47
CLDND1-201ENST00000341181 PCLOQ9Y6V0 5065 aa12.09□□□□□ -0.47
CLDND1-201ENST00000341181 IGLV8-61A0A075B6I0 122 aa12.09□□□□□ -0.47
CLDND1-201ENST00000341181 A0A087WVE0 104 aa12.09□□□□□ -0.47
CLDND1-201ENST00000341181 Q6Q795 121 aa12.08□□□□□ -0.48
CLDND1-201ENST00000341181 Q8NBF4 154 aa12.08□□□□□ -0.48
CLDND1-201ENST00000341181 TYMSOSQ8TAI1 123 aa12.05□□□□□ -0.48
CLDND1-201ENST00000341181 IMUPQ9GZP8 106 aa12.03□□□□□ -0.48
CLDND1-201ENST00000341181 HIST1H4AP62805 103 aaKnown RBP12.02□□□□□ -0.49
CLDND1-201ENST00000341181 FAM236AA0A1B0GUQ0 79 aa12.01□□□□□ -0.49
CLDND1-201ENST00000341181 FAM236BA0A1B0GV22 79 aa12.01□□□□□ -0.49
CLDND1-201ENST00000341181 NREPQ16612 68 aa11.99□□□□□ -0.49
CLDND1-201ENST00000341181 HRCT1Q6UXD1 115 aa11.99□□□□□ -0.49
CLDND1-201ENST00000341181 MT1HL1P0DM35 61 aa11.98□□□□□ -0.49
CLDND1-201ENST00000341181 SSBP3-AS1Q7Z2R9 100 aa11.98□□□□□ -0.49
CLDND1-201ENST00000341181 KRTAP10-8P60410 259 aa11.98□□□□□ -0.49
CLDND1-201ENST00000341181 Q8N9L7 120 aa11.96□□□□□ -0.49
CLDND1-201ENST00000341181 ATP5EP2Q5VTU8 51 aa11.95□□□□□ -0.5
CLDND1-201ENST00000341181 A0A087WSZ3 146 aa11.94□□□□□ -0.5
CLDND1-201ENST00000341181 ANAPC13Q9BS18 74 aa11.92□□□□□ -0.5
CLDND1-201ENST00000341181 OXTP01178 125 aa11.92□□□□□ -0.5
CLDND1-201ENST00000341181 DEFB116Q30KQ4 102 aa11.91□□□□□ -0.5
CLDND1-201ENST00000341181 LINC00304Q8N9R0 145 aa11.91□□□□□ -0.5
CLDND1-201ENST00000341181 CXCL6P80162 114 aa11.91□□□□□ -0.5
CLDND1-201ENST00000341181 DMBT1Q9UGM3 2413 aaPredicted RBP11.9□□□□□ -0.5
CLDND1-201ENST00000341181 KRTAP29-1A8MX34 341 aaPredicted RBP11.89□□□□□ -0.51
CLDND1-201ENST00000341181 A0A1B0GW54 56 aa11.87□□□□□ -0.51
CLDND1-201ENST00000341181 BPY2O14599 106 aa11.87□□□□□ -0.51
CLDND1-201ENST00000341181 CD164Q04900 197 aa11.84□□□□□ -0.51
CLDND1-201ENST00000341181 C4orf48Q5BLP8 95 aa11.83□□□□□ -0.52
CLDND1-201ENST00000341181 IGKV4-1P06312 121 aa11.82□□□□□ -0.52
CLDND1-201ENST00000341181 DSCR10P59022 87 aa11.81□□□□□ -0.52
CLDND1-201ENST00000341181 SPINK1P00995 79 aa11.8□□□□□ -0.52
CLDND1-201ENST00000341181 SPAG11AQ6PDA7 123 aa11.78□□□□□ -0.52
CLDND1-201ENST00000341181 CCDC179H3BU77 68 aa11.78□□□□□ -0.52
CLDND1-201ENST00000341181 HERC1Q15751 4861 aa11.77□□□□□ -0.53
CLDND1-201ENST00000341181 K7EQZ3 153 aa11.77□□□□□ -0.53
CLDND1-201ENST00000341181 J3QL48 77 aa11.76□□□□□ -0.53
CLDND1-201ENST00000341181 ATOX1O00244 68 aa11.72□□□□□ -0.53
CLDND1-201ENST00000341181 LINC00472Q9H8W2 130 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms