RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 HECTD4Q9Y4D8 3996 aa9.87□□□□□ -0.83
CCDC144A-202ENST00000340621 F8WEM9 126 aa9.87□□□□□ -0.83
CCDC144A-202ENST00000340621 BPY2O14599 106 aa9.87□□□□□ -0.83
CCDC144A-202ENST00000340621 CYSTM1Q9H1C7 97 aa9.87□□□□□ -0.83
CCDC144A-202ENST00000340621 SPACA4Q8TDM5 124 aa9.87□□□□□ -0.83
CCDC144A-202ENST00000340621 FBN3Q75N90 2809 aa9.85□□□□□ -0.83
CCDC144A-202ENST00000340621 UBE2AP49459 152 aa9.85□□□□□ -0.83
CCDC144A-202ENST00000340621 IGFL1Q6UW32 110 aa9.85□□□□□ -0.83
CCDC144A-202ENST00000340621 IGKV4-1P06312 121 aa9.84□□□□□ -0.83
CCDC144A-202ENST00000340621 BCE1O60756 84 aa9.84□□□□□ -0.83
CCDC144A-202ENST00000340621 IGLV8-61A0A075B6I0 122 aa9.83□□□□□ -0.84
CCDC144A-202ENST00000340621 RTL8CO15255 209 aa9.82□□□□□ -0.84
CCDC144A-202ENST00000340621 TGP01266 2768 aa9.82□□□□□ -0.84
CCDC144A-202ENST00000340621 TRAV7A0A075B6U4 112 aa9.81□□□□□ -0.84
CCDC144A-202ENST00000340621 DNAH17Q9UFH2 4485 aa9.81□□□□□ -0.84
CCDC144A-202ENST00000340621 SPRR1BP22528 89 aa9.8□□□□□ -0.84
CCDC144A-202ENST00000340621 KRTAP13-1Q8IUC0 172 aa9.8□□□□□ -0.84
CCDC144A-202ENST00000340621 C1orf134Q5TEV5 83 aa9.79□□□□□ -0.84
CCDC144A-202ENST00000340621 LY6G6CO95867 125 aa9.78□□□□□ -0.84
CCDC144A-202ENST00000340621 C20orf197Q8N268 126 aa9.77□□□□□ -0.85
CCDC144A-202ENST00000340621 TMEM258P61165 79 aa9.76□□□□□ -0.85
CCDC144A-202ENST00000340621 DSCR10P59022 87 aa9.75□□□□□ -0.85
CCDC144A-202ENST00000340621 A0A087WSZ3 146 aa9.74□□□□□ -0.85
CCDC144A-202ENST00000340621 IGLV5-52A0A0A0MRZ9 124 aa9.74□□□□□ -0.85
CCDC144A-202ENST00000340621 RPS28P62857 69 aaKnown RBP9.74□□□□□ -0.85
CCDC144A-202ENST00000340621 DNAH8Q96JB1 4490 aa9.73□□□□□ -0.85
CCDC144A-202ENST00000340621 DEFB116Q30KQ4 102 aa9.72□□□□□ -0.85
CCDC144A-202ENST00000340621 PLAC8Q9NZF1 115 aa9.72□□□□□ -0.85
CCDC144A-202ENST00000340621 PSORS1C2Q9UIG4 136 aa9.71□□□□□ -0.85
CCDC144A-202ENST00000340621 K7EQZ3 153 aa9.7□□□□□ -0.86
CCDC144A-202ENST00000340621 J3KT08 172 aa9.69□□□□□ -0.86
CCDC144A-202ENST00000340621 OCR1Q9BZK8 76 aa9.68□□□□□ -0.86
CCDC144A-202ENST00000340621 FRAS1Q86XX4 4008 aa9.67□□□□□ -0.86
CCDC144A-202ENST00000340621 SNURFQ9Y675 71 aa9.67□□□□□ -0.86
CCDC144A-202ENST00000340621 KLKP1Q107X0 134 aa9.66□□□□□ -0.86
CCDC144A-202ENST00000340621 WWC2-AS2Q96NR7 200 aa9.65□□□□□ -0.86
CCDC144A-202ENST00000340621 DNAH6Q9C0G6 4158 aa9.64□□□□□ -0.87
CCDC144A-202ENST00000340621 IGLV9-49A0A0B4J1Y8 123 aa9.64□□□□□ -0.87
CCDC144A-202ENST00000340621 DNAH11Q96DT5 4516 aa9.64□□□□□ -0.87
CCDC144A-202ENST00000340621 KRTAP21-3Q3LHN1 58 aa9.63□□□□□ -0.87
CCDC144A-202ENST00000340621 LINC00483Q53H64 154 aa9.63□□□□□ -0.87
CCDC144A-202ENST00000340621 HYDINQ4G0P3 5121 aa9.62□□□□□ -0.87
CCDC144A-202ENST00000340621 H7BZZ5 65 aa9.62□□□□□ -0.87
CCDC144A-202ENST00000340621 ZNF861PO60384 105 aa9.62□□□□□ -0.87
CCDC144A-202ENST00000340621 KRTAP10-2P60368 255 aa9.62□□□□□ -0.87
CCDC144A-202ENST00000340621 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
CCDC144A-202ENST00000340621 DNAH5Q8TE73 4624 aa9.62□□□□□ -0.87
CCDC144A-202ENST00000340621 FAM30AQ9NZY2 134 aa9.62□□□□□ -0.87
CCDC144A-202ENST00000340621 TMEM254Q8TBM7 123 aa9.6□□□□□ -0.87
CCDC144A-202ENST00000340621 ANAPC11Q9NYG5 84 aa9.6□□□□□ -0.87
CCDC144A-202ENST00000340621 LINC00472Q9H8W2 130 aa9.6□□□□□ -0.87
CCDC144A-202ENST00000340621 HCG22E2RYF7 251 aa9.59□□□□□ -0.87
CCDC144A-202ENST00000340621 ZNF706Q9Y5V0 76 aaPredicted RBP9.59□□□□□ -0.87
CCDC144A-202ENST00000340621 ALMS1Q8TCU4 4167 aa9.56□□□□□ -0.88
CCDC144A-202ENST00000340621 CIRBP-AS1Q8TBR5 109 aa9.55□□□□□ -0.88
CCDC144A-202ENST00000340621 A0A0U1RQV1 116 aa9.55□□□□□ -0.88
CCDC144A-202ENST00000340621 IGLV7-43P04211 117 aa9.55□□□□□ -0.88
CCDC144A-202ENST00000340621 HRCT1Q6UXD1 115 aa9.55□□□□□ -0.88
CCDC144A-202ENST00000340621 PKD1P98161 4303 aa9.54□□□□□ -0.88
CCDC144A-202ENST00000340621 NDUFC1O43677 76 aa9.54□□□□□ -0.88
CCDC144A-202ENST00000340621 WFDC13Q8IUB5 93 aa9.54□□□□□ -0.88
CCDC144A-202ENST00000340621 FAT2Q9NYQ8 4349 aa9.54□□□□□ -0.88
CCDC144A-202ENST00000340621 MOBPQ13875 183 aa9.54□□□□□ -0.88
CCDC144A-202ENST00000340621 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
CCDC144A-202ENST00000340621 A8MWP4 228 aa9.52□□□□□ -0.88
CCDC144A-202ENST00000340621 FAM236DA0A1B0GTK5 79 aa9.52□□□□□ -0.89
CCDC144A-202ENST00000340621 FAM236CP0DP71 79 aa9.52□□□□□ -0.89
CCDC144A-202ENST00000340621 C5orf47Q569G3 176 aa9.51□□□□□ -0.89
CCDC144A-202ENST00000340621 LCE6AA0A183 80 aa9.51□□□□□ -0.89
CCDC144A-202ENST00000340621 KRTAP29-1A8MX34 341 aaPredicted RBP9.5□□□□□ -0.89
CCDC144A-202ENST00000340621 KRTAP10-1P60331 282 aa9.49□□□□□ -0.89
CCDC144A-202ENST00000340621 Q96NJ1 140 aa9.49□□□□□ -0.89
CCDC144A-202ENST00000340621 LRP1BQ9NZR2 4599 aa9.49□□□□□ -0.89
CCDC144A-202ENST00000340621 OXTP01178 125 aa9.48□□□□□ -0.89
CCDC144A-202ENST00000340621 CASC2Q6XLA1 102 aa9.47□□□□□ -0.89
CCDC144A-202ENST00000340621 Q6ZSA8 131 aa9.46□□□□□ -0.89
CCDC144A-202ENST00000340621 SERP1Q9Y6X1 66 aa9.45□□□□□ -0.9
CCDC144A-202ENST00000340621 ATP5EP56381 51 aaPredicted RBP9.44□□□□□ -0.9
CCDC144A-202ENST00000340621 NDUFB1O75438 58 aa9.42□□□□□ -0.9
CCDC144A-202ENST00000340621 MMP24-AS1A0A0U1RRL7 71 aa9.41□□□□□ -0.9
CCDC144A-202ENST00000340621 ZCCHC13Q8WW36 166 aaKnown RBP9.41□□□□□ -0.9
CCDC144A-202ENST00000340621 SACSQ9NZJ4 4579 aa9.38□□□□□ -0.91
CCDC144A-202ENST00000340621 hDV103S1A0JD37 113 aa9.36□□□□□ -0.91
CCDC144A-202ENST00000340621 Q5XG85 94 aa9.35□□□□□ -0.91
CCDC144A-202ENST00000340621 IGHV6-1A0A0B4J1U7 121 aa9.34□□□□□ -0.91
CCDC144A-202ENST00000340621 SSBP3-AS1Q7Z2R9 100 aa9.34□□□□□ -0.91
CCDC144A-202ENST00000340621 MP68P56378 58 aa9.33□□□□□ -0.92
CCDC144A-202ENST00000340621 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
CCDC144A-202ENST00000340621 ASB16-AS1Q495Z4 193 aa9.33□□□□□ -0.92
CCDC144A-202ENST00000340621 C8orf17Q9NRJ1 99 aa9.33□□□□□ -0.92
CCDC144A-202ENST00000340621 A0A087X002 238 aa9.33□□□□□ -0.92
CCDC144A-202ENST00000340621 A0A1B0GVX0 72 aa9.33□□□□□ -0.92
CCDC144A-202ENST00000340621 VPS13BQ7Z7G8 4022 aa9.32□□□□□ -0.92
CCDC144A-202ENST00000340621 LINC00208Q96KT6 92 aa9.32□□□□□ -0.92
CCDC144A-202ENST00000340621 H0Y9P7 68 aa9.31□□□□□ -0.92
CCDC144A-202ENST00000340621 CDK2AP2O75956 126 aa9.31□□□□□ -0.92
CCDC144A-202ENST00000340621 PKHD1P08F94 4074 aa9.31□□□□□ -0.92
CCDC144A-202ENST00000340621 CD164Q04900 197 aa9.31□□□□□ -0.92
CCDC144A-202ENST00000340621 KRTAP13-2Q52LG2 175 aa9.3□□□□□ -0.92
CCDC144A-202ENST00000340621 SMIM26A0A096LP01 95 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms