RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 IGLV7-46A0A075B6I9 117 aa7.81□□□□□ -1.16
FN1-202ENST00000336916 FRYQ5TBA9 3013 aa7.81□□□□□ -1.16
FN1-202ENST00000336916 LINC00483Q53H64 154 aa7.8□□□□□ -1.16
FN1-202ENST00000336916 XIRP2A4UGR9 3374 aa7.8□□□□□ -1.16
FN1-202ENST00000336916 UTP20O75691 2785 aaKnown RBP7.79□□□□□ -1.16
FN1-202ENST00000336916 WDFY4Q6ZS81 3184 aa7.78□□□□□ -1.16
FN1-202ENST00000336916 RANBP2P49792 3224 aaKnown RBP7.78□□□□□ -1.16
FN1-202ENST00000336916 H7BZZ5 65 aa7.77□□□□□ -1.17
FN1-202ENST00000336916 TRIOO75962 3097 aa7.77□□□□□ -1.17
FN1-202ENST00000336916 PLAC8Q9NZF1 115 aa7.76□□□□□ -1.17
FN1-202ENST00000336916 NBEAL2Q6ZNJ1 2754 aa7.76□□□□□ -1.17
FN1-202ENST00000336916 UBR5O95071 2799 aaPredicted RBP7.75□□□□□ -1.17
FN1-202ENST00000336916 CHD9Q3L8U1 2897 aa7.75□□□□□ -1.17
FN1-202ENST00000336916 SEC61BP60468 96 aaKnown RBP7.75□□□□□ -1.17
FN1-202ENST00000336916 KTN1-AS1Q86SY8 53 aa7.74□□□□□ -1.17
FN1-202ENST00000336916 M0R2T5 61 aa7.73□□□□□ -1.17
FN1-202ENST00000336916 TNP2Q05952 138 aa7.71□□□□□ -1.17
FN1-202ENST00000336916 A0A1W2PNM2 257 aa7.71□□□□□ -1.17
FN1-202ENST00000336916 Q1T7F1 81 aa7.7□□□□□ -1.18
FN1-202ENST00000336916 LINC01554Q52M75 96 aa7.7□□□□□ -1.18
FN1-202ENST00000336916 ANAPC11Q9NYG5 84 aa7.7□□□□□ -1.18
FN1-202ENST00000336916 CAMK2N1Q7Z7J9 78 aa7.7□□□□□ -1.18
FN1-202ENST00000336916 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
FN1-202ENST00000336916 LAMA3Q16787 3333 aa7.69□□□□□ -1.18
FN1-202ENST00000336916 OCR1Q9BZK8 76 aa7.67□□□□□ -1.18
FN1-202ENST00000336916 EIF4EBP3O60516 100 aaPredicted RBP7.67□□□□□ -1.18
FN1-202ENST00000336916 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
FN1-202ENST00000336916 LCA10Q71F78 164 aa7.66□□□□□ -1.18
FN1-202ENST00000336916 Q8N1X5 172 aa7.66□□□□□ -1.18
FN1-202ENST00000336916 ITPR1Q14643 2758 aa7.65□□□□□ -1.18
FN1-202ENST00000336916 A0A1B0GU33 70 aa7.65□□□□□ -1.18
FN1-202ENST00000336916 S4R3F8 94 aa7.65□□□□□ -1.18
FN1-202ENST00000336916 ZCCHC13Q8WW36 166 aaKnown RBP7.65□□□□□ -1.19
FN1-202ENST00000336916 FLNCQ14315 2725 aa7.64□□□□□ -1.19
FN1-202ENST00000336916 HTTP42858 3142 aa7.63□□□□□ -1.19
FN1-202ENST00000336916 LRBAP50851 2863 aa7.63□□□□□ -1.19
FN1-202ENST00000336916 FP248Q71RG6 208 aaPredicted RBP7.63□□□□□ -1.19
FN1-202ENST00000336916 A0A0D9SG42 100 aa7.62□□□□□ -1.19
FN1-202ENST00000336916 PRR26Q8N8Z3 221 aa7.62□□□□□ -1.19
FN1-202ENST00000336916 KALRNO60229 2985 aa7.62□□□□□ -1.19
FN1-202ENST00000336916 SPRR1AP35321 89 aa7.62□□□□□ -1.19
FN1-202ENST00000336916 OXTP01178 125 aa7.62□□□□□ -1.19
FN1-202ENST00000336916 USP34Q70CQ2 3546 aa7.62□□□□□ -1.19
FN1-202ENST00000336916 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.6□□□□□ -1.19
FN1-202ENST00000336916 SPRR1BP22528 89 aa7.59□□□□□ -1.19
FN1-202ENST00000336916 CELSR3Q9NYQ7 3312 aa7.58□□□□□ -1.2
FN1-202ENST00000336916 Q75L30 129 aa7.58□□□□□ -1.2
FN1-202ENST00000336916 A0A0G2JQZ4 141 aa7.55□□□□□ -1.2
FN1-202ENST00000336916 LAMA1P25391 3075 aa7.54□□□□□ -1.2
FN1-202ENST00000336916 LCE6AA0A183 80 aa7.54□□□□□ -1.2
FN1-202ENST00000336916 R4GN34 69 aa7.52□□□□□ -1.21
FN1-202ENST00000336916 CRYBG3Q68DQ2 2970 aa7.52□□□□□ -1.21
FN1-202ENST00000336916 Q5VSD8 79 aa7.51□□□□□ -1.21
FN1-202ENST00000336916 REV3LO60673 3130 aa7.5□□□□□ -1.21
FN1-202ENST00000336916 BRCA2P51587 3418 aa7.5□□□□□ -1.21
FN1-202ENST00000336916 ZZEF1O43149 2961 aa7.49□□□□□ -1.21
FN1-202ENST00000336916 ASH1LQ9NR48 2969 aaKnown RBP7.49□□□□□ -1.21
FN1-202ENST00000336916 TENM1Q9UKZ4 2725 aa7.48□□□□□ -1.21
FN1-202ENST00000336916 LINC00472Q9H8W2 130 aa7.48□□□□□ -1.21
FN1-202ENST00000336916 MMP24-AS1A0A0U1RRL7 71 aa7.47□□□□□ -1.21
FN1-202ENST00000336916 HIVEP1P15822 2718 aa7.46□□□□□ -1.21
FN1-202ENST00000336916 RPS29P62273 56 aaKnown RBP7.45□□□□□ -1.22
FN1-202ENST00000336916 SPINK7P58062 85 aa7.45□□□□□ -1.22
FN1-202ENST00000336916 NIPBLQ6KC79 2804 aaeCLIP7.44□□□□□ -1.22
FN1-202ENST00000336916 TACC2O95359 2948 aa7.43□□□□□ -1.22
FN1-202ENST00000336916 LINC01558Q9Y6Z2 57 aa7.43□□□□□ -1.22
FN1-202ENST00000336916 CDH23Q9H251 3354 aa7.43□□□□□ -1.22
FN1-202ENST00000336916 Q5W150 140 aa7.43□□□□□ -1.22
FN1-202ENST00000336916 UNC80Q8N2C7 3258 aa7.42□□□□□ -1.22
FN1-202ENST00000336916 CELSR2Q9HCU4 2923 aa7.41□□□□□ -1.22
FN1-202ENST00000336916 NBEAQ8NFP9 2946 aa7.4□□□□□ -1.22
FN1-202ENST00000336916 DMXL2Q8TDJ6 3036 aa7.39□□□□□ -1.23
FN1-202ENST00000336916 NF1P21359 2839 aa7.39□□□□□ -1.23
FN1-202ENST00000336916 DNAH14Q0VDD8 3507 aa7.38□□□□□ -1.23
FN1-202ENST00000336916 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
FN1-202ENST00000336916 ASB16-AS1Q495Z4 193 aa7.38□□□□□ -1.23
FN1-202ENST00000336916 KRTAP21-3Q3LHN1 58 aa7.37□□□□□ -1.23
FN1-202ENST00000336916 TNRC18O15417 2968 aaPredicted RBP7.37□□□□□ -1.23
FN1-202ENST00000336916 COL12A1Q99715 3063 aa7.35□□□□□ -1.23
FN1-202ENST00000336916 BOD1L1Q8NFC6 3051 aa7.34□□□□□ -1.23
FN1-202ENST00000336916 Q8N9P0 234 aaPredicted RBP7.34□□□□□ -1.23
FN1-202ENST00000336916 COL6A3P12111 3177 aa7.34□□□□□ -1.23
FN1-202ENST00000336916 RPL37P61927 97 aaKnown RBP7.34□□□□□ -1.23
FN1-202ENST00000336916 Q6ZR54 194 aa7.34□□□□□ -1.24
FN1-202ENST00000336916 FREM2Q5SZK8 3169 aa7.33□□□□□ -1.24
FN1-202ENST00000336916 A0A0A0MQY5 61 aa7.33□□□□□ -1.24
FN1-202ENST00000336916 KRTAP26-1Q6PEX3 210 aa7.3□□□□□ -1.24
FN1-202ENST00000336916 KRTAP10-1P60331 282 aa7.29□□□□□ -1.24
FN1-202ENST00000336916 ADGRG4Q8IZF6 3080 aa7.29□□□□□ -1.24
FN1-202ENST00000336916 ROMO1P60602 79 aa7.28□□□□□ -1.24
FN1-202ENST00000336916 KRTAP1-5Q9BYS1 174 aa7.28□□□□□ -1.24
FN1-202ENST00000336916 M0QZ58 72 aa7.25□□□□□ -1.25
FN1-202ENST00000336916 Q5XG85 94 aa7.24□□□□□ -1.25
FN1-202ENST00000336916 H1FX-AS1Q4G0G2 97 aa7.24□□□□□ -1.25
FN1-202ENST00000336916 KRTAP4-16G5E9R7 235 aaPredicted RBP7.23□□□□□ -1.25
FN1-202ENST00000336916 DCHS2Q6V1P9 2916 aa7.22□□□□□ -1.25
FN1-202ENST00000336916 VCANP13611 3396 aa7.22□□□□□ -1.25
FN1-202ENST00000336916 KRTAP10-2P60368 255 aa7.22□□□□□ -1.25
FN1-202ENST00000336916 PANO1I0J062 215 aa7.22□□□□□ -1.25
FN1-202ENST00000336916 ZANQ9Y493 2812 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms