RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 PKIGQ9Y2B9 76 aa10.93□□□□□ -0.66
DDX28-201ENST00000332395 FUSP35637 526 aaKnown RBP eCLIP10.92□□□□□ -0.66
DDX28-201ENST00000332395 LINC00336Q6ZUF6 198 aa10.92□□□□□ -0.66
DDX28-201ENST00000332395 A0A1W2PNM2 257 aa10.92□□□□□ -0.66
DDX28-201ENST00000332395 BPY2O14599 106 aa10.91□□□□□ -0.66
DDX28-201ENST00000332395 SMIM29Q86T20 159 aa10.91□□□□□ -0.66
DDX28-201ENST00000332395 KRTAP11-1Q8IUC1 163 aa10.91□□□□□ -0.66
DDX28-201ENST00000332395 PRO0628Q9UI54 55 aa10.91□□□□□ -0.66
DDX28-201ENST00000332395 MEGF8Q7Z7M0 2845 aa10.91□□□□□ -0.66
DDX28-201ENST00000332395 A0A1B0GW54 56 aa10.9□□□□□ -0.66
DDX28-201ENST00000332395 TMEM254Q8TBM7 123 aa10.9□□□□□ -0.66
DDX28-201ENST00000332395 HIGD2AQ9BW72 106 aa10.9□□□□□ -0.66
DDX28-201ENST00000332395 Q8NBF4 154 aa10.89□□□□□ -0.67
DDX28-201ENST00000332395 LINC00474Q9P2X8 69 aa10.89□□□□□ -0.67
DDX28-201ENST00000332395 IGKV4-1P06312 121 aa10.87□□□□□ -0.67
DDX28-201ENST00000332395 PANO1I0J062 215 aa10.86□□□□□ -0.67
DDX28-201ENST00000332395 DNHD1Q96M86 4753 aa10.86□□□□□ -0.67
DDX28-201ENST00000332395 SPRR4Q96PI1 79 aa10.86□□□□□ -0.67
DDX28-201ENST00000332395 LINC00476Q8WZB0 136 aa10.85□□□□□ -0.67
DDX28-201ENST00000332395 Q8N9L7 120 aa10.84□□□□□ -0.67
DDX28-201ENST00000332395 H0Y9J4 135 aa10.84□□□□□ -0.67
DDX28-201ENST00000332395 OCR1Q9BZK8 76 aa10.84□□□□□ -0.67
DDX28-201ENST00000332395 A0A087WTM6 91 aa10.83□□□□□ -0.68
DDX28-201ENST00000332395 A0A0U1RQV1 116 aa10.83□□□□□ -0.68
DDX28-201ENST00000332395 IGFL1Q6UW32 110 aa10.8□□□□□ -0.68
DDX28-201ENST00000332395 SPACA4Q8TDM5 124 aa10.8□□□□□ -0.68
DDX28-201ENST00000332395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.8□□□□□ -0.68
DDX28-201ENST00000332395 UBE2AP49459 152 aa10.79□□□□□ -0.68
DDX28-201ENST00000332395 Q6ZR54 194 aa10.79□□□□□ -0.68
DDX28-201ENST00000332395 IGLV8-61A0A075B6I0 122 aa10.79□□□□□ -0.68
DDX28-201ENST00000332395 A0A0G2JQZ4 141 aa10.79□□□□□ -0.68
DDX28-201ENST00000332395 KMT2AQ03164 3969 aa10.78□□□□□ -0.68
DDX28-201ENST00000332395 DNAH2Q9P225 4427 aa10.78□□□□□ -0.68
DDX28-201ENST00000332395 FAM229BQ4G0N7 80 aa10.77□□□□□ -0.69
DDX28-201ENST00000332395 SPRR1BP22528 89 aa10.76□□□□□ -0.69
DDX28-201ENST00000332395 HECTD4Q9Y4D8 3996 aa10.75□□□□□ -0.69
DDX28-201ENST00000332395 RTL8CO15255 209 aa10.74□□□□□ -0.69
DDX28-201ENST00000332395 SRRM2Q9UQ35 2752 aaKnown RBP10.74□□□□□ -0.69
DDX28-201ENST00000332395 KRTAP13-1Q8IUC0 172 aa10.73□□□□□ -0.69
DDX28-201ENST00000332395 DNAH17Q9UFH2 4485 aa10.71□□□□□ -0.7
DDX28-201ENST00000332395 DSCR10P59022 87 aa10.69□□□□□ -0.7
DDX28-201ENST00000332395 C1orf134Q5TEV5 83 aa10.69□□□□□ -0.7
DDX28-201ENST00000332395 MPLKIPQ8TAP9 179 aa10.69□□□□□ -0.7
DDX28-201ENST00000332395 A0A087WSZ3 146 aa10.68□□□□□ -0.7
DDX28-201ENST00000332395 BRK1Q8WUW1 75 aa10.68□□□□□ -0.7
DDX28-201ENST00000332395 LCE6AA0A183 80 aa10.67□□□□□ -0.7
DDX28-201ENST00000332395 FAM30AQ9NZY2 134 aa10.67□□□□□ -0.7
DDX28-201ENST00000332395 K7EQZ3 153 aa10.65□□□□□ -0.7
DDX28-201ENST00000332395 LY6G6CO95867 125 aa10.65□□□□□ -0.7
DDX28-201ENST00000332395 FBN3Q75N90 2809 aa10.65□□□□□ -0.71
DDX28-201ENST00000332395 IGLV5-52A0A0A0MRZ9 124 aa10.65□□□□□ -0.71
DDX28-201ENST00000332395 TGP01266 2768 aa10.64□□□□□ -0.71
DDX28-201ENST00000332395 PLAC8Q9NZF1 115 aa10.63□□□□□ -0.71
DDX28-201ENST00000332395 SEC61GP60059 68 aa10.63□□□□□ -0.71
DDX28-201ENST00000332395 DEFB116Q30KQ4 102 aa10.62□□□□□ -0.71
DDX28-201ENST00000332395 hDV103S1A0JD37 113 aa10.61□□□□□ -0.71
DDX28-201ENST00000332395 PSORS1C2Q9UIG4 136 aa10.61□□□□□ -0.71
DDX28-201ENST00000332395 DNAH8Q96JB1 4490 aa10.6□□□□□ -0.71
DDX28-201ENST00000332395 ZCCHC13Q8WW36 166 aaKnown RBP10.59□□□□□ -0.71
DDX28-201ENST00000332395 DNAH6Q9C0G6 4158 aa10.57□□□□□ -0.72
DDX28-201ENST00000332395 LINC00483Q53H64 154 aa10.56□□□□□ -0.72
DDX28-201ENST00000332395 IGLV9-49A0A0B4J1Y8 123 aa10.55□□□□□ -0.72
DDX28-201ENST00000332395 HCG22E2RYF7 251 aa10.55□□□□□ -0.72
DDX28-201ENST00000332395 ZNF706Q9Y5V0 76 aaPredicted RBP10.55□□□□□ -0.72
DDX28-201ENST00000332395 FRAS1Q86XX4 4008 aa10.53□□□□□ -0.72
DDX28-201ENST00000332395 C1orf195Q5TG92 126 aa10.53□□□□□ -0.72
DDX28-201ENST00000332395 C1orf64Q8NEQ6 169 aa10.53□□□□□ -0.72
DDX28-201ENST00000332395 ZNF861PO60384 105 aa10.53□□□□□ -0.72
DDX28-201ENST00000332395 WWC2-AS2Q96NR7 200 aa10.53□□□□□ -0.72
DDX28-201ENST00000332395 V9GYY9 64 aa10.53□□□□□ -0.72
DDX28-201ENST00000332395 RPL37AP61513 92 aaKnown RBP10.52□□□□□ -0.72
DDX28-201ENST00000332395 Q1T7F1 81 aa10.52□□□□□ -0.72
DDX28-201ENST00000332395 LINC00472Q9H8W2 130 aa10.52□□□□□ -0.72
DDX28-201ENST00000332395 KRTAP21-3Q3LHN1 58 aa10.49□□□□□ -0.73
DDX28-201ENST00000332395 CYP4F30PQ9H0H9 118 aa10.49□□□□□ -0.73
DDX28-201ENST00000332395 ALMS1Q8TCU4 4167 aa10.48□□□□□ -0.73
DDX28-201ENST00000332395 KRTAP10-2P60368 255 aa10.48□□□□□ -0.73
DDX28-201ENST00000332395 DNAH5Q8TE73 4624 aa10.47□□□□□ -0.73
DDX28-201ENST00000332395 WFDC13Q8IUB5 93 aa10.47□□□□□ -0.73
DDX28-201ENST00000332395 DNAH11Q96DT5 4516 aa10.47□□□□□ -0.73
DDX28-201ENST00000332395 A8MWP4 228 aa10.46□□□□□ -0.73
DDX28-201ENST00000332395 PRR15Q8IV56 129 aa10.46□□□□□ -0.73
DDX28-201ENST00000332395 ANAPC11Q9NYG5 84 aa10.45□□□□□ -0.74
DDX28-201ENST00000332395 MOBPQ13875 183 aa10.45□□□□□ -0.74
DDX28-201ENST00000332395 IGLV7-43P04211 117 aa10.44□□□□□ -0.74
DDX28-201ENST00000332395 KRTAP29-1A8MX34 341 aaPredicted RBP10.42□□□□□ -0.74
DDX28-201ENST00000332395 CIRBP-AS1Q8TBR5 109 aa10.42□□□□□ -0.74
DDX28-201ENST00000332395 NDUFB1O75438 58 aa10.41□□□□□ -0.74
DDX28-201ENST00000332395 CASC2Q6XLA1 102 aa10.4□□□□□ -0.74
DDX28-201ENST00000332395 Q96NJ1 140 aa10.4□□□□□ -0.74
DDX28-201ENST00000332395 TRAV22A0A0B4J277 110 aa10.39□□□□□ -0.75
DDX28-201ENST00000332395 PRR4Q16378 134 aa10.39□□□□□ -0.75
DDX28-201ENST00000332395 HYDINQ4G0P3 5121 aa10.38□□□□□ -0.75
DDX28-201ENST00000332395 FAT2Q9NYQ8 4349 aa10.38□□□□□ -0.75
DDX28-201ENST00000332395 PKD1P98161 4303 aa10.37□□□□□ -0.75
DDX28-201ENST00000332395 PSPHP1O15172 72 aa10.36□□□□□ -0.75
DDX28-201ENST00000332395 MP68P56378 58 aa10.36□□□□□ -0.75
DDX28-201ENST00000332395 Q6ZSA8 131 aa10.35□□□□□ -0.75
DDX28-201ENST00000332395 KRTAP10-1P60331 282 aa10.34□□□□□ -0.75
DDX28-201ENST00000332395 MMP24-AS1A0A0U1RRL7 71 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms