RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 PLA2G1BP04054 148 aaKnown RBP11.04□□□□□ -0.64
SYNE4-201ENST00000324444 ERC2-IT1O76042 136 aa11.02□□□□□ -0.65
SYNE4-201ENST00000324444 ETDBQ3ZM63 59 aa11.02□□□□□ -0.65
SYNE4-201ENST00000324444 DEFB105AQ8NG35 78 aa11.02□□□□□ -0.65
SYNE4-201ENST00000324444 LAMTOR3Q9UHA4 124 aa11.02□□□□□ -0.65
SYNE4-201ENST00000324444 RPL37AP61513 92 aaKnown RBP11□□□□□ -0.65
SYNE4-201ENST00000324444 C21orf62-AS1Q17RA5 79 aa11□□□□□ -0.65
SYNE4-201ENST00000324444 Q8N377 158 aa10.99□□□□□ -0.65
SYNE4-201ENST00000324444 SPRR1BP22528 89 aa10.98□□□□□ -0.65
SYNE4-201ENST00000324444 NDUFV3P56181 108 aaKnown RBP10.98□□□□□ -0.65
SYNE4-201ENST00000324444 ST20-AS1Q8NBB2 130 aa10.98□□□□□ -0.65
SYNE4-201ENST00000324444 J3QR89 54 aa10.97□□□□□ -0.65
SYNE4-201ENST00000324444 LINC01547P58512 204 aaPredicted RBP10.97□□□□□ -0.65
SYNE4-201ENST00000324444 F8WEM9 126 aa10.96□□□□□ -0.65
SYNE4-201ENST00000324444 PDE6GP18545 87 aa10.95□□□□□ -0.66
SYNE4-201ENST00000324444 RBM3P98179 157 aaKnown RBP10.95□□□□□ -0.66
SYNE4-201ENST00000324444 GAGE2AQ6NT46 116 aa10.94□□□□□ -0.66
SYNE4-201ENST00000324444 OBSCN-AS1Q96MR7 158 aa10.94□□□□□ -0.66
SYNE4-201ENST00000324444 SPRR4Q96PI1 79 aa10.94□□□□□ -0.66
SYNE4-201ENST00000324444 DSCR8Q96T75 97 aa10.92□□□□□ -0.66
SYNE4-201ENST00000324444 LINC00483Q53H64 154 aa10.91□□□□□ -0.66
SYNE4-201ENST00000324444 SPINK6Q6UWN8 80 aa10.9□□□□□ -0.66
SYNE4-201ENST00000324444 J3QL48 77 aa10.9□□□□□ -0.67
SYNE4-201ENST00000324444 K7ERU9 68 aa10.9□□□□□ -0.67
SYNE4-201ENST00000324444 KRTAP10-4P60372 401 aaPredicted RBP10.9□□□□□ -0.67
SYNE4-201ENST00000324444 LOC110117498A0A087WWA1 95 aa10.87□□□□□ -0.67
SYNE4-201ENST00000324444 SMIM29Q86T20 159 aa10.87□□□□□ -0.67
SYNE4-201ENST00000324444 PKHD1L1Q86WI1 4243 aa10.86□□□□□ -0.67
SYNE4-201ENST00000324444 Q6JHZ5 121 aa10.85□□□□□ -0.67
SYNE4-201ENST00000324444 C14orf132Q9NPU4 83 aa10.85□□□□□ -0.67
SYNE4-201ENST00000324444 IGLV8-61A0A075B6I0 122 aa10.84□□□□□ -0.67
SYNE4-201ENST00000324444 TRBV7-4A0A0J9YYF1 115 aa10.84□□□□□ -0.67
SYNE4-201ENST00000324444 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
SYNE4-201ENST00000324444 FAM229BQ4G0N7 80 aa10.83□□□□□ -0.68
SYNE4-201ENST00000324444 C3orf22Q8N5N4 141 aa10.83□□□□□ -0.68
SYNE4-201ENST00000324444 LRP1Q07954 4544 aaKnown RBP10.82□□□□□ -0.68
SYNE4-201ENST00000324444 ACYP1P07311 99 aa10.82□□□□□ -0.68
SYNE4-201ENST00000324444 A0A1B0GV72 72 aa10.81□□□□□ -0.68
SYNE4-201ENST00000324444 CCKP06307 115 aa10.81□□□□□ -0.68
SYNE4-201ENST00000324444 A0A1B0GW54 56 aa10.8□□□□□ -0.68
SYNE4-201ENST00000324444 FAM240AA0A1B0GVK7 77 aa10.79□□□□□ -0.68
SYNE4-201ENST00000324444 Q6ZQT0 140 aa10.79□□□□□ -0.68
SYNE4-201ENST00000324444 C9orf153Q5TBE3 101 aa10.77□□□□□ -0.68
SYNE4-201ENST00000324444 Q8NBF4 154 aa10.77□□□□□ -0.68
SYNE4-201ENST00000324444 FAT3Q8TDW7 4589 aa10.77□□□□□ -0.69
SYNE4-201ENST00000324444 IGLV9-49A0A0B4J1Y8 123 aa10.76□□□□□ -0.69
SYNE4-201ENST00000324444 OXTP01178 125 aa10.76□□□□□ -0.69
SYNE4-201ENST00000324444 CRYGAP11844 174 aa10.76□□□□□ -0.69
SYNE4-201ENST00000324444 SSBP3-AS1Q7Z2R9 100 aa10.76□□□□□ -0.69
SYNE4-201ENST00000324444 IGFL1Q6UW32 110 aa10.72□□□□□ -0.69
SYNE4-201ENST00000324444 VPS25Q9BRG1 176 aa10.72□□□□□ -0.69
SYNE4-201ENST00000324444 MOBPQ13875 183 aa10.71□□□□□ -0.69
SYNE4-201ENST00000324444 KRTAP1-4P0C5Y4 121 aa10.7□□□□□ -0.7
SYNE4-201ENST00000324444 Q6Q795 121 aa10.7□□□□□ -0.7
SYNE4-201ENST00000324444 ANAPC11Q9NYG5 84 aa10.7□□□□□ -0.7
SYNE4-201ENST00000324444 A0A1W2PNM2 257 aa10.65□□□□□ -0.7
SYNE4-201ENST00000324444 CD164Q04900 197 aa10.65□□□□□ -0.7
SYNE4-201ENST00000324444 UBL5Q9BZL1 73 aa10.65□□□□□ -0.7
SYNE4-201ENST00000324444 TYMSOSQ8TAI1 123 aa10.64□□□□□ -0.71
SYNE4-201ENST00000324444 A0A087X002 238 aa10.63□□□□□ -0.71
SYNE4-201ENST00000324444 HMCN2Q8NDA2 5059 aa10.6□□□□□ -0.71
SYNE4-201ENST00000324444 KRTAP13-2Q52LG2 175 aa10.6□□□□□ -0.71
SYNE4-201ENST00000324444 C4orf48Q5BLP8 95 aa10.6□□□□□ -0.71
SYNE4-201ENST00000324444 LINC00846Q9NV44 126 aa10.6□□□□□ -0.71
SYNE4-201ENST00000324444 SS18L2Q9UHA2 77 aa10.6□□□□□ -0.71
SYNE4-201ENST00000324444 TRBV7-7A0A0K0K1E9 115 aa10.59□□□□□ -0.71
SYNE4-201ENST00000324444 MT1HL1P0DM35 61 aa10.58□□□□□ -0.72
SYNE4-201ENST00000324444 NREPQ16612 68 aa10.58□□□□□ -0.72
SYNE4-201ENST00000324444 SPAG11AQ6PDA7 123 aa10.57□□□□□ -0.72
SYNE4-201ENST00000324444 LINC00643Q86TS7 51 aa10.57□□□□□ -0.72
SYNE4-201ENST00000324444 A0A087WSZ3 146 aa10.55□□□□□ -0.72
SYNE4-201ENST00000324444 PRR26Q8N8Z3 221 aa10.55□□□□□ -0.72
SYNE4-201ENST00000324444 A0A0G2JQZ4 141 aa10.54□□□□□ -0.72
SYNE4-201ENST00000324444 ATP5EP2Q5VTU8 51 aa10.53□□□□□ -0.72
SYNE4-201ENST00000324444 Q6ZVQ6 151 aa10.53□□□□□ -0.72
SYNE4-201ENST00000324444 CDIP1Q9H305 208 aa10.53□□□□□ -0.72
SYNE4-201ENST00000324444 SPINK1P00995 79 aa10.52□□□□□ -0.72
SYNE4-201ENST00000324444 LIMD2Q9BT23 127 aa10.52□□□□□ -0.73
SYNE4-201ENST00000324444 TNXBP22105 4242 aa10.51□□□□□ -0.73
SYNE4-201ENST00000324444 HRCT1Q6UXD1 115 aa10.51□□□□□ -0.73
SYNE4-201ENST00000324444 RPS29P62273 56 aaKnown RBP10.5□□□□□ -0.73
SYNE4-201ENST00000324444 Q5XG85 94 aa10.5□□□□□ -0.73
SYNE4-201ENST00000324444 LINC00304Q8N9R0 145 aa10.5□□□□□ -0.73
SYNE4-201ENST00000324444 ASB16-AS1Q495Z4 193 aa10.47□□□□□ -0.73
SYNE4-201ENST00000324444 J3KT08 172 aa10.46□□□□□ -0.74
SYNE4-201ENST00000324444 CXCL6P80162 114 aa10.46□□□□□ -0.74
SYNE4-201ENST00000324444 BPY2O14599 106 aa10.45□□□□□ -0.74
SYNE4-201ENST00000324444 SIGMAR1Q99720 223 aa10.45□□□□□ -0.74
SYNE4-201ENST00000324444 KRTAP10-8P60410 259 aa10.42□□□□□ -0.74
SYNE4-201ENST00000324444 IMUPQ9GZP8 106 aa10.42□□□□□ -0.74
SYNE4-201ENST00000324444 LINC00472Q9H8W2 130 aa10.4□□□□□ -0.74
SYNE4-201ENST00000324444 UBR4Q5T4S7 5183 aa10.39□□□□□ -0.75
SYNE4-201ENST00000324444 IGKV3D-7A0A0C4DH55 119 aa10.37□□□□□ -0.75
SYNE4-201ENST00000324444 NDUFB1O75438 58 aa10.35□□□□□ -0.75
SYNE4-201ENST00000324444 MT-ATP8P03928 68 aa10.35□□□□□ -0.75
SYNE4-201ENST00000324444 IGKV4-1P06312 121 aa10.33□□□□□ -0.76
SYNE4-201ENST00000324444 A8MWP4 228 aa10.31□□□□□ -0.76
SYNE4-201ENST00000324444 HIST1H4AP62805 103 aaKnown RBP10.31□□□□□ -0.76
SYNE4-201ENST00000324444 Q96NJ1 140 aa10.31□□□□□ -0.76
SYNE4-201ENST00000324444 LRP2P98164 4655 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms