RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 FP248Q71RG6 208 aaPredicted RBP10.61□□□□□ -0.71
SMCHD1-201ENST00000320876 CASC10Q5T4H9 136 aa10.59□□□□□ -0.71
SMCHD1-201ENST00000320876 S4R3F8 94 aa10.58□□□□□ -0.72
SMCHD1-201ENST00000320876 PRAC1Q96KF2 57 aa10.57□□□□□ -0.72
SMCHD1-201ENST00000320876 KMT2BQ9UMN6 2715 aaPredicted RBP10.52□□□□□ -0.72
SMCHD1-201ENST00000320876 A0A096LNT2 108 aa10.52□□□□□ -0.73
SMCHD1-201ENST00000320876 ZCCHC13Q8WW36 166 aaKnown RBP10.52□□□□□ -0.73
SMCHD1-201ENST00000320876 MMP24-AS1A0A0U1RRL7 71 aa10.52□□□□□ -0.73
SMCHD1-201ENST00000320876 KRTAP10-3P60369 221 aa10.51□□□□□ -0.73
SMCHD1-201ENST00000320876 MAP1AP78559 2803 aaPredicted RBP10.49□□□□□ -0.73
SMCHD1-201ENST00000320876 CYSTM1Q9H1C7 97 aa10.48□□□□□ -0.73
SMCHD1-201ENST00000320876 SPINK7P58062 85 aa10.48□□□□□ -0.73
SMCHD1-201ENST00000320876 STAB2Q8WWQ8 2551 aa10.46□□□□□ -0.74
SMCHD1-201ENST00000320876 ROMO1P60602 79 aa10.45□□□□□ -0.74
SMCHD1-201ENST00000320876 Q5W150 140 aa10.44□□□□□ -0.74
SMCHD1-201ENST00000320876 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
SMCHD1-201ENST00000320876 ASB16-AS1Q495Z4 193 aa10.42□□□□□ -0.74
SMCHD1-201ENST00000320876 M0R2T5 61 aa10.41□□□□□ -0.74
SMCHD1-201ENST00000320876 R4GN34 69 aa10.39□□□□□ -0.75
SMCHD1-201ENST00000320876 TNP2Q05952 138 aa10.38□□□□□ -0.75
SMCHD1-201ENST00000320876 LINC00472Q9H8W2 130 aa10.38□□□□□ -0.75
SMCHD1-201ENST00000320876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.38□□□□□ -0.75
SMCHD1-201ENST00000320876 APCP25054 2843 aa10.37□□□□□ -0.75
SMCHD1-201ENST00000320876 LAMA2P24043 3122 aaKnown RBP10.37□□□□□ -0.75
SMCHD1-201ENST00000320876 ITPR2Q14571 2701 aa10.35□□□□□ -0.75
SMCHD1-201ENST00000320876 RPL37P61927 97 aaKnown RBP10.35□□□□□ -0.75
SMCHD1-201ENST00000320876 TEP1Q99973 2627 aaKnown RBP10.35□□□□□ -0.75
SMCHD1-201ENST00000320876 SPRR1AP35321 89 aa10.35□□□□□ -0.75
SMCHD1-201ENST00000320876 PLAC8Q9NZF1 115 aa10.31□□□□□ -0.76
SMCHD1-201ENST00000320876 NBEAL2Q6ZNJ1 2754 aa10.28□□□□□ -0.76
SMCHD1-201ENST00000320876 H1FX-AS1Q4G0G2 97 aa10.27□□□□□ -0.77
SMCHD1-201ENST00000320876 ZNF292O60281 2723 aa10.25□□□□□ -0.77
SMCHD1-201ENST00000320876 SPRR1BP22528 89 aa10.25□□□□□ -0.77
SMCHD1-201ENST00000320876 SETXQ7Z333 2677 aaKnown RBP10.24□□□□□ -0.77
SMCHD1-201ENST00000320876 OXTP01178 125 aa10.23□□□□□ -0.77
SMCHD1-201ENST00000320876 Q8NDZ9 215 aa10.23□□□□□ -0.77
SMCHD1-201ENST00000320876 Q6ZR54 194 aa10.21□□□□□ -0.78
SMCHD1-201ENST00000320876 KRTAP16-1A8MUX0 517 aa10.19□□□□□ -0.78
SMCHD1-201ENST00000320876 KRTAP1-3Q8IUG1 177 aa10.18□□□□□ -0.78
SMCHD1-201ENST00000320876 KRTAP26-1Q6PEX3 210 aa10.16□□□□□ -0.78
SMCHD1-201ENST00000320876 MGAQ8IWI9 3026 aa10.16□□□□□ -0.78
SMCHD1-201ENST00000320876 M0QZ58 72 aa10.15□□□□□ -0.78
SMCHD1-201ENST00000320876 TRANK1O15050 2925 aa10.13□□□□□ -0.79
SMCHD1-201ENST00000320876 SEC61BP60468 96 aaKnown RBP10.13□□□□□ -0.79
SMCHD1-201ENST00000320876 BAHCC1Q9P281 2608 aa10.12□□□□□ -0.79
SMCHD1-201ENST00000320876 ITPR1Q14643 2758 aa10.12□□□□□ -0.79
SMCHD1-201ENST00000320876 KRTAP1-1Q07627 177 aa10.11□□□□□ -0.79
SMCHD1-201ENST00000320876 CHD7Q9P2D1 2997 aa10.1□□□□□ -0.79
SMCHD1-201ENST00000320876 UTP20O75691 2785 aaKnown RBP10.08□□□□□ -0.8
SMCHD1-201ENST00000320876 FRYQ5TBA9 3013 aa10.07□□□□□ -0.8
SMCHD1-201ENST00000320876 DSPP15924 2871 aaKnown RBP10.05□□□□□ -0.8
SMCHD1-201ENST00000320876 SPATA8Q6RVD6 105 aa10.05□□□□□ -0.8
SMCHD1-201ENST00000320876 ADM2Q7Z4H4 148 aa10.04□□□□□ -0.8
SMCHD1-201ENST00000320876 XIRP2A4UGR9 3374 aa10.03□□□□□ -0.8
SMCHD1-201ENST00000320876 VPS13AQ96RL7 3174 aa10.02□□□□□ -0.81
SMCHD1-201ENST00000320876 PLAC4Q8WY50 150 aa10.01□□□□□ -0.81
SMCHD1-201ENST00000320876 PANO1I0J062 215 aa10.01□□□□□ -0.81
SMCHD1-201ENST00000320876 NSD1Q96L73 2696 aaPredicted RBP10□□□□□ -0.81
SMCHD1-201ENST00000320876 KRTAP25-1Q3LHN0 102 aa9.98□□□□□ -0.81
SMCHD1-201ENST00000320876 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
SMCHD1-201ENST00000320876 A6NN06 94 aa9.96□□□□□ -0.82
SMCHD1-201ENST00000320876 KRTAP29-1A8MX34 341 aaPredicted RBP9.94□□□□□ -0.82
SMCHD1-201ENST00000320876 TRIOO75962 3097 aa9.94□□□□□ -0.82
SMCHD1-201ENST00000320876 KALRNO60229 2985 aa9.92□□□□□ -0.82
SMCHD1-201ENST00000320876 MKI67P46013 3256 aaKnown RBP9.92□□□□□ -0.82
SMCHD1-201ENST00000320876 KRTAP4-16G5E9R7 235 aaPredicted RBP9.9□□□□□ -0.82
SMCHD1-201ENST00000320876 IGSF10Q6WRI0 2623 aa9.89□□□□□ -0.83
SMCHD1-201ENST00000320876 Q5VSD8 79 aa9.89□□□□□ -0.83
SMCHD1-201ENST00000320876 LRBAP50851 2863 aa9.87□□□□□ -0.83
SMCHD1-201ENST00000320876 KRTAP1-5Q9BYS1 174 aa9.87□□□□□ -0.83
SMCHD1-201ENST00000320876 FREM2Q5SZK8 3169 aa9.83□□□□□ -0.84
SMCHD1-201ENST00000320876 FRYLO94915 3013 aa9.81□□□□□ -0.84
SMCHD1-201ENST00000320876 C20orf166-AS1Q96NR2 134 aa9.81□□□□□ -0.84
SMCHD1-201ENST00000320876 NDUFAF8A1L188 74 aa9.78□□□□□ -0.84
SMCHD1-201ENST00000320876 PRUNE2Q8WUY3 3088 aa9.77□□□□□ -0.85
SMCHD1-201ENST00000320876 RANBP2P49792 3224 aaKnown RBP9.75□□□□□ -0.85
SMCHD1-201ENST00000320876 WDFY4Q6ZS81 3184 aa9.75□□□□□ -0.85
SMCHD1-201ENST00000320876 ASH1LQ9NR48 2969 aaKnown RBP9.75□□□□□ -0.85
SMCHD1-201ENST00000320876 LCE6AA0A183 80 aa9.75□□□□□ -0.85
SMCHD1-201ENST00000320876 CHD9Q3L8U1 2897 aa9.75□□□□□ -0.85
SMCHD1-201ENST00000320876 KRTAP10-1P60331 282 aa9.74□□□□□ -0.85
SMCHD1-201ENST00000320876 RPS29P62273 56 aaKnown RBP9.73□□□□□ -0.85
SMCHD1-201ENST00000320876 CELSR3Q9NYQ7 3312 aa9.73□□□□□ -0.85
SMCHD1-201ENST00000320876 A0A087X002 238 aa9.71□□□□□ -0.85
SMCHD1-201ENST00000320876 A8MUU9 505 aa9.7□□□□□ -0.86
SMCHD1-201ENST00000320876 KRTAP10-2P60368 255 aa9.69□□□□□ -0.86
SMCHD1-201ENST00000320876 A8MU10 97 aa9.67□□□□□ -0.86
SMCHD1-201ENST00000320876 TACC2O95359 2948 aa9.66□□□□□ -0.86
SMCHD1-201ENST00000320876 NOTCH2NLQ7Z3S9 236 aa9.65□□□□□ -0.86
SMCHD1-201ENST00000320876 REV3LO60673 3130 aa9.65□□□□□ -0.86
SMCHD1-201ENST00000320876 HIVEP1P15822 2718 aa9.64□□□□□ -0.87
SMCHD1-201ENST00000320876 NBEAQ8NFP9 2946 aa9.62□□□□□ -0.87
SMCHD1-201ENST00000320876 DNAH14Q0VDD8 3507 aa9.61□□□□□ -0.87
SMCHD1-201ENST00000320876 LAMA3Q16787 3333 aa9.61□□□□□ -0.87
SMCHD1-201ENST00000320876 FLNCQ14315 2725 aa9.56□□□□□ -0.88
SMCHD1-201ENST00000320876 BRCA2P51587 3418 aa9.55□□□□□ -0.88
SMCHD1-201ENST00000320876 DMXL2Q8TDJ6 3036 aa9.54□□□□□ -0.88
SMCHD1-201ENST00000320876 C10orf95Q9H7T3 257 aa9.52□□□□□ -0.89
SMCHD1-201ENST00000320876 COL12A1Q99715 3063 aa9.51□□□□□ -0.89
SMCHD1-201ENST00000320876 TNP1P09430 55 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms