RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 A0A1B0GU33 70 aa5.38□□□□□ -1.55
SSBP2-201ENST00000320672 EPG5Q9HCE0 2579 aa5.38□□□□□ -1.55
SSBP2-201ENST00000320672 KRTAP10-1P60331 282 aa5.38□□□□□ -1.55
SSBP2-201ENST00000320672 LCA10Q71F78 164 aa5.37□□□□□ -1.55
SSBP2-201ENST00000320672 MMP24-AS1A0A0U1RRL7 71 aa5.37□□□□□ -1.55
SSBP2-201ENST00000320672 USP24Q9UPU5 2620 aa5.36□□□□□ -1.55
SSBP2-201ENST00000320672 COL6A3P12111 3177 aa5.35□□□□□ -1.55
SSBP2-201ENST00000320672 SPATA8Q6RVD6 105 aa5.35□□□□□ -1.55
SSBP2-201ENST00000320672 MGAQ8IWI9 3026 aa5.35□□□□□ -1.55
SSBP2-201ENST00000320672 CSAG1Q6PB30 78 aa5.34□□□□□ -1.55
SSBP2-201ENST00000320672 CFAP47Q6ZTR5 3102 aa5.34□□□□□ -1.56
SSBP2-201ENST00000320672 SPEGQ15772 3267 aa5.33□□□□□ -1.56
SSBP2-201ENST00000320672 Q5W150 140 aa5.33□□□□□ -1.56
SSBP2-201ENST00000320672 Q5VSD8 79 aa5.33□□□□□ -1.56
SSBP2-201ENST00000320672 S4R3F8 94 aa5.33□□□□□ -1.56
SSBP2-201ENST00000320672 CR1P17927 2039 aa5.32□□□□□ -1.56
SSBP2-201ENST00000320672 TRANK1O15050 2925 aa5.32□□□□□ -1.56
SSBP2-201ENST00000320672 ZCCHC13Q8WW36 166 aaKnown RBP5.31□□□□□ -1.56
SSBP2-201ENST00000320672 A0A087X002 238 aa5.31□□□□□ -1.56
SSBP2-201ENST00000320672 FP248Q71RG6 208 aaPredicted RBP5.31□□□□□ -1.56
SSBP2-201ENST00000320672 NOTCH2NLQ7Z3S9 236 aa5.31□□□□□ -1.56
SSBP2-201ENST00000320672 Q5XG85 94 aa5.3□□□□□ -1.56
SSBP2-201ENST00000320672 FLNBO75369 2602 aaKnown RBP5.3□□□□□ -1.56
SSBP2-201ENST00000320672 Q1T7F1 81 aa5.3□□□□□ -1.56
SSBP2-201ENST00000320672 OXTP01178 125 aa5.3□□□□□ -1.56
SSBP2-201ENST00000320672 LUZP6Q538Z0 58 aa5.27□□□□□ -1.57
SSBP2-201ENST00000320672 KRTAP11-1Q8IUC1 163 aa5.27□□□□□ -1.57
SSBP2-201ENST00000320672 PLAC8Q9NZF1 115 aa5.26□□□□□ -1.57
SSBP2-201ENST00000320672 R4GN34 69 aa5.25□□□□□ -1.57
SSBP2-201ENST00000320672 SPANXA2-OT1Q8N9U9 137 aa5.25□□□□□ -1.57
SSBP2-201ENST00000320672 AKAP13Q12802 2813 aa5.25□□□□□ -1.57
SSBP2-201ENST00000320672 Q5VV11 94 aa5.25□□□□□ -1.57
SSBP2-201ENST00000320672 KRTAP26-1Q6PEX3 210 aa5.24□□□□□ -1.57
SSBP2-201ENST00000320672 H3BS24 57 aa5.24□□□□□ -1.57
SSBP2-201ENST00000320672 ATRQ13535 2644 aa5.23□□□□□ -1.57
SSBP2-201ENST00000320672 M0QZ58 72 aa5.23□□□□□ -1.57
SSBP2-201ENST00000320672 A8MU10 97 aa5.22□□□□□ -1.57
SSBP2-201ENST00000320672 LAMA1P25391 3075 aa5.22□□□□□ -1.57
SSBP2-201ENST00000320672 LINC00472Q9H8W2 130 aa5.22□□□□□ -1.57
SSBP2-201ENST00000320672 REV3LO60673 3130 aa5.22□□□□□ -1.57
SSBP2-201ENST00000320672 ADM2Q7Z4H4 148 aa5.21□□□□□ -1.58
SSBP2-201ENST00000320672 NBEAQ8NFP9 2946 aa5.2□□□□□ -1.58
SSBP2-201ENST00000320672 LINC01558Q9Y6Z2 57 aa5.19□□□□□ -1.58
SSBP2-201ENST00000320672 FRYQ5TBA9 3013 aa5.19□□□□□ -1.58
SSBP2-201ENST00000320672 SPRR1AP35321 89 aa5.19□□□□□ -1.58
SSBP2-201ENST00000320672 Q75L30 129 aa5.18□□□□□ -1.58
SSBP2-201ENST00000320672 Q6ZR54 194 aa5.16□□□□□ -1.58
SSBP2-201ENST00000320672 LINC00483Q53H64 154 aa5.16□□□□□ -1.58
SSBP2-201ENST00000320672 EYSQ5T1H1 3165 aa5.15□□□□□ -1.58
SSBP2-201ENST00000320672 CENPEQ02224 2701 aa5.14□□□□□ -1.59
SSBP2-201ENST00000320672 ITPR3Q14573 2671 aa5.14□□□□□ -1.59
SSBP2-201ENST00000320672 DMAC1Q96GE9 116 aa5.13□□□□□ -1.59
SSBP2-201ENST00000320672 ATMQ13315 3056 aa5.13□□□□□ -1.59
SSBP2-201ENST00000320672 USP34Q70CQ2 3546 aa5.13□□□□□ -1.59
SSBP2-201ENST00000320672 FRYLO94915 3013 aa5.13□□□□□ -1.59
SSBP2-201ENST00000320672 SPTBN5Q9NRC6 3674 aaKnown RBP5.12□□□□□ -1.59
SSBP2-201ENST00000320672 LCE6AA0A183 80 aa5.12□□□□□ -1.59
SSBP2-201ENST00000320672 MYO15AQ9UKN7 3530 aa5.12□□□□□ -1.59
SSBP2-201ENST00000320672 DSPP15924 2871 aaKnown RBP5.12□□□□□ -1.59
SSBP2-201ENST00000320672 BOD1L1Q8NFC6 3051 aa5.12□□□□□ -1.59
SSBP2-201ENST00000320672 FLNAP21333 2647 aaKnown RBP5.11□□□□□ -1.59
SSBP2-201ENST00000320672 DMXL2Q8TDJ6 3036 aa5.11□□□□□ -1.59
SSBP2-201ENST00000320672 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
SSBP2-201ENST00000320672 KRTAP7-1Q8IUC3 87 aa5.1□□□□□ -1.59
SSBP2-201ENST00000320672 MAST4O15021 2626 aa5.09□□□□□ -1.59
SSBP2-201ENST00000320672 MAP1AP78559 2803 aaPredicted RBP5.09□□□□□ -1.6
SSBP2-201ENST00000320672 RPL37P61927 97 aaKnown RBP5.08□□□□□ -1.6
SSBP2-201ENST00000320672 ZNF292O60281 2723 aa5.08□□□□□ -1.6
SSBP2-201ENST00000320672 A0A1B0GVY2 172 aa5.08□□□□□ -1.6
SSBP2-201ENST00000320672 CHD6Q8TD26 2715 aa5.07□□□□□ -1.6
SSBP2-201ENST00000320672 ROMO1P60602 79 aa5.06□□□□□ -1.6
SSBP2-201ENST00000320672 TACC2O95359 2948 aa5.06□□□□□ -1.6
SSBP2-201ENST00000320672 ADGRG4Q8IZF6 3080 aa5.06□□□□□ -1.6
SSBP2-201ENST00000320672 SEC61BP60468 96 aaKnown RBP5.06□□□□□ -1.6
SSBP2-201ENST00000320672 KALRNO60229 2985 aa5.05□□□□□ -1.6
SSBP2-201ENST00000320672 SPRR1BP22528 89 aa5.05□□□□□ -1.6
SSBP2-201ENST00000320672 TEP1Q99973 2627 aaKnown RBP5.03□□□□□ -1.6
SSBP2-201ENST00000320672 KRTAP4-16G5E9R7 235 aaPredicted RBP5.02□□□□□ -1.61
SSBP2-201ENST00000320672 PLAC4Q8WY50 150 aa5.02□□□□□ -1.61
SSBP2-201ENST00000320672 NBEAL2Q6ZNJ1 2754 aa5.02□□□□□ -1.61
SSBP2-201ENST00000320672 CRYBG3Q68DQ2 2970 aa5.02□□□□□ -1.61
SSBP2-201ENST00000320672 CFAP46Q8IYW2 2715 aa5.01□□□□□ -1.61
SSBP2-201ENST00000320672 KRTAP13-2Q52LG2 175 aa5□□□□□ -1.61
SSBP2-201ENST00000320672 KRTAP29-1A8MX34 341 aaPredicted RBP5□□□□□ -1.61
SSBP2-201ENST00000320672 TEX15Q9BXT5 2789 aa4.99□□□□□ -1.61
SSBP2-201ENST00000320672 COL12A1Q99715 3063 aa4.99□□□□□ -1.61
SSBP2-201ENST00000320672 C20orf166-AS1Q96NR2 134 aa4.98□□□□□ -1.61
SSBP2-201ENST00000320672 ZZEF1O43149 2961 aa4.97□□□□□ -1.61
SSBP2-201ENST00000320672 HELZ2Q9BYK8 2649 aaKnown RBP4.97□□□□□ -1.61
SSBP2-201ENST00000320672 A8MUU9 505 aa4.96□□□□□ -1.62
SSBP2-201ENST00000320672 ASH1LQ9NR48 2969 aaKnown RBP4.96□□□□□ -1.62
SSBP2-201ENST00000320672 C10orf95Q9H7T3 257 aa4.95□□□□□ -1.62
SSBP2-201ENST00000320672 GCN1Q92616 2671 aaKnown RBP4.94□□□□□ -1.62
SSBP2-201ENST00000320672 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
SSBP2-201ENST00000320672 Q6ZRN7 208 aaPredicted RBP4.93□□□□□ -1.62
SSBP2-201ENST00000320672 SETXQ7Z333 2677 aaKnown RBP4.92□□□□□ -1.62
SSBP2-201ENST00000320672 IGSF10Q6WRI0 2623 aa4.92□□□□□ -1.62
SSBP2-201ENST00000320672 LRBAP50851 2863 aa4.91□□□□□ -1.62
SSBP2-201ENST00000320672 DCHS1Q96JQ0 3298 aa4.91□□□□□ -1.62
SSBP2-201ENST00000320672 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms