RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 SMCPP49901 116 aaPredicted RBP16.45■□□□□ 0.22
CTDNEP1-201ENST00000318988 NDUFV3P56181 108 aaKnown RBP16.45■□□□□ 0.22
CTDNEP1-201ENST00000318988 F8WEM9 126 aa16.44■□□□□ 0.22
CTDNEP1-201ENST00000318988 C3orf22Q8N5N4 141 aa16.44■□□□□ 0.22
CTDNEP1-201ENST00000318988 BIRC6Q9NR09 4857 aa16.44■□□□□ 0.22
CTDNEP1-201ENST00000318988 ANAPC11Q9NYG5 84 aa16.43■□□□□ 0.22
CTDNEP1-201ENST00000318988 KRTAP17-1Q9BYP8 105 aa16.42■□□□□ 0.22
CTDNEP1-201ENST00000318988 LINC01600Q96MT4 127 aa16.4■□□□□ 0.22
CTDNEP1-201ENST00000318988 SMIM29Q86T20 159 aa16.4■□□□□ 0.22
CTDNEP1-201ENST00000318988 FAM229BQ4G0N7 80 aa16.38■□□□□ 0.21
CTDNEP1-201ENST00000318988 A0A1B0GV72 72 aa16.37■□□□□ 0.21
CTDNEP1-201ENST00000318988 KRTAP1-4P0C5Y4 121 aa16.36■□□□□ 0.21
CTDNEP1-201ENST00000318988 IGLV9-49A0A0B4J1Y8 123 aa16.35■□□□□ 0.21
CTDNEP1-201ENST00000318988 JMJD7-PLA2G4BH0Y9G9 81 aa16.35■□□□□ 0.21
CTDNEP1-201ENST00000318988 CRYGAP11844 174 aa16.34■□□□□ 0.21
CTDNEP1-201ENST00000318988 C9orf153Q5TBE3 101 aa16.34■□□□□ 0.21
CTDNEP1-201ENST00000318988 RBM3P98179 157 aaKnown RBP16.32■□□□□ 0.2
CTDNEP1-201ENST00000318988 ETDBQ3ZM63 59 aa16.3■□□□□ 0.2
CTDNEP1-201ENST00000318988 TEN1Q86WV5 123 aa16.3■□□□□ 0.2
CTDNEP1-201ENST00000318988 MOBPQ13875 183 aa16.28■□□□□ 0.2
CTDNEP1-201ENST00000318988 DSCR8Q96T75 97 aa16.28■□□□□ 0.2
CTDNEP1-201ENST00000318988 A0A087X002 238 aa16.27■□□□□ 0.2
CTDNEP1-201ENST00000318988 Q8NBF4 154 aa16.26■□□□□ 0.19
CTDNEP1-201ENST00000318988 PKHD1L1Q86WI1 4243 aa16.26■□□□□ 0.19
CTDNEP1-201ENST00000318988 OBSCN-AS1Q96MR7 158 aa16.25■□□□□ 0.19
CTDNEP1-201ENST00000318988 IGLV8-61A0A075B6I0 122 aa16.24■□□□□ 0.19
CTDNEP1-201ENST00000318988 Q6JHZ5 121 aa16.24■□□□□ 0.19
CTDNEP1-201ENST00000318988 C14orf132Q9NPU4 83 aa16.23■□□□□ 0.19
CTDNEP1-201ENST00000318988 PRR26Q8N8Z3 221 aa16.21■□□□□ 0.19
CTDNEP1-201ENST00000318988 KRTAP13-2Q52LG2 175 aa16.2■□□□□ 0.18
CTDNEP1-201ENST00000318988 SSBP3-AS1Q7Z2R9 100 aa16.19■□□□□ 0.18
CTDNEP1-201ENST00000318988 TYMSOSQ8TAI1 123 aa16.19■□□□□ 0.18
CTDNEP1-201ENST00000318988 KRTAP4-5Q9BYR2 181 aa16.19■□□□□ 0.18
CTDNEP1-201ENST00000318988 PDE6GP18545 87 aa16.18■□□□□ 0.18
CTDNEP1-201ENST00000318988 TRBV7-4A0A0J9YYF1 115 aa16.17■□□□□ 0.18
CTDNEP1-201ENST00000318988 IGFL1Q6UW32 110 aa16.16■□□□□ 0.18
CTDNEP1-201ENST00000318988 LOC110117498A0A087WWA1 95 aa16.14■□□□□ 0.18
CTDNEP1-201ENST00000318988 HERC2O95714 4834 aa16.12■□□□□ 0.17
CTDNEP1-201ENST00000318988 A0A0G2JQZ4 141 aa16.11■□□□□ 0.17
CTDNEP1-201ENST00000318988 C21orf62-AS1Q17RA5 79 aa16.11■□□□□ 0.17
CTDNEP1-201ENST00000318988 Q6ZQT0 140 aa16.11■□□□□ 0.17
CTDNEP1-201ENST00000318988 VPS25Q9BRG1 176 aa16.11■□□□□ 0.17
CTDNEP1-201ENST00000318988 CCKP06307 115 aa16.1■□□□□ 0.17
CTDNEP1-201ENST00000318988 C4orf48Q5BLP8 95 aa16.04■□□□□ 0.16
CTDNEP1-201ENST00000318988 HRCT1Q6UXD1 115 aa16.04■□□□□ 0.16
CTDNEP1-201ENST00000318988 A0A1W2PNM2 257 aa16.03■□□□□ 0.16
CTDNEP1-201ENST00000318988 OXTP01178 125 aa16.03■□□□□ 0.16
CTDNEP1-201ENST00000318988 FLG2Q5D862 2391 aaPredicted RBP16.01■□□□□ 0.15
CTDNEP1-201ENST00000318988 CD164Q04900 197 aa15.99■□□□□ 0.15
CTDNEP1-201ENST00000318988 Q6Q795 121 aa15.99■□□□□ 0.15
CTDNEP1-201ENST00000318988 LINC00304Q8N9R0 145 aa15.99■□□□□ 0.15
CTDNEP1-201ENST00000318988 J3QR89 54 aa15.98■□□□□ 0.15
CTDNEP1-201ENST00000318988 KRTAP10-8P60410 259 aa15.98■□□□□ 0.15
CTDNEP1-201ENST00000318988 SPAG11AQ6PDA7 123 aa15.96■□□□□ 0.15
CTDNEP1-201ENST00000318988 TRBV7-7A0A0K0K1E9 115 aa15.94■□□□□ 0.14
CTDNEP1-201ENST00000318988 A0A1B0GW54 56 aa15.94■□□□□ 0.14
CTDNEP1-201ENST00000318988 SPINK1P00995 79 aa15.91■□□□□ 0.14
CTDNEP1-201ENST00000318988 A0A087WSZ3 146 aa15.9■□□□□ 0.14
CTDNEP1-201ENST00000318988 KRTAP29-1A8MX34 341 aaPredicted RBP15.9■□□□□ 0.14
CTDNEP1-201ENST00000318988 LRP1Q07954 4544 aaKnown RBP15.89■□□□□ 0.13
CTDNEP1-201ENST00000318988 FAT3Q8TDW7 4589 aa15.89■□□□□ 0.13
CTDNEP1-201ENST00000318988 ACYP1P07311 99 aa15.86■□□□□ 0.13
CTDNEP1-201ENST00000318988 MT1HL1P0DM35 61 aa15.85■□□□□ 0.13
CTDNEP1-201ENST00000318988 SS18L2Q9UHA2 77 aa15.85■□□□□ 0.13
CTDNEP1-201ENST00000318988 K7ERU9 68 aa15.84■□□□□ 0.13
CTDNEP1-201ENST00000318988 LIMD2Q9BT23 127 aa15.84■□□□□ 0.13
CTDNEP1-201ENST00000318988 MYCBP2O75592 4640 aa15.84■□□□□ 0.13
CTDNEP1-201ENST00000318988 FAM240AA0A1B0GVK7 77 aa15.84■□□□□ 0.13
CTDNEP1-201ENST00000318988 ABCA13Q86UQ4 5058 aa15.82■□□□□ 0.12
CTDNEP1-201ENST00000318988 RPS29P62273 56 aaKnown RBP15.81■□□□□ 0.12
CTDNEP1-201ENST00000318988 J3QL48 77 aa15.79■□□□□ 0.12
CTDNEP1-201ENST00000318988 LINC00846Q9NV44 126 aa15.78■□□□□ 0.12
CTDNEP1-201ENST00000318988 TNXBP22105 4242 aa15.78■□□□□ 0.12
CTDNEP1-201ENST00000318988 NREPQ16612 68 aa15.77■□□□□ 0.11
CTDNEP1-201ENST00000318988 UBL5Q9BZL1 73 aa15.77■□□□□ 0.11
CTDNEP1-201ENST00000318988 Q5XG85 94 aa15.75■□□□□ 0.11
CTDNEP1-201ENST00000318988 Q6ZVQ6 151 aa15.69■□□□□ 0.1
CTDNEP1-201ENST00000318988 ASB16-AS1Q495Z4 193 aa15.68■□□□□ 0.1
CTDNEP1-201ENST00000318988 LINC00472Q9H8W2 130 aa15.61■□□□□ 0.09
CTDNEP1-201ENST00000318988 DMBT1Q9UGM3 2413 aaPredicted RBP15.6■□□□□ 0.09
CTDNEP1-201ENST00000318988 DEFB116Q30KQ4 102 aa15.59■□□□□ 0.09
CTDNEP1-201ENST00000318988 C1orf195Q5TG92 126 aa15.59■□□□□ 0.09
CTDNEP1-201ENST00000318988 Q96NJ1 140 aa15.58■□□□□ 0.08
CTDNEP1-201ENST00000318988 J3KT08 172 aa15.57■□□□□ 0.08
CTDNEP1-201ENST00000318988 BPY2O14599 106 aa15.57■□□□□ 0.08
CTDNEP1-201ENST00000318988 IGKV4-1P06312 121 aa15.56■□□□□ 0.08
CTDNEP1-201ENST00000318988 SIGMAR1Q99720 223 aa15.56■□□□□ 0.08
CTDNEP1-201ENST00000318988 LINC00643Q86TS7 51 aa15.54■□□□□ 0.08
CTDNEP1-201ENST00000318988 CDIP1Q9H305 208 aa15.53■□□□□ 0.08
CTDNEP1-201ENST00000318988 RETNLBQ9BQ08 111 aa15.53■□□□□ 0.08
CTDNEP1-201ENST00000318988 PCLOQ9Y6V0 5065 aa15.51■□□□□ 0.07
CTDNEP1-201ENST00000318988 ATP5EP2Q5VTU8 51 aa15.48■□□□□ 0.07
CTDNEP1-201ENST00000318988 CXCL6P80162 114 aa15.46■□□□□ 0.07
CTDNEP1-201ENST00000318988 IGKV3D-7A0A0C4DH55 119 aa15.45■□□□□ 0.06
CTDNEP1-201ENST00000318988 NDUFB1O75438 58 aa15.44■□□□□ 0.06
CTDNEP1-201ENST00000318988 A8MWP4 228 aa15.42■□□□□ 0.06
CTDNEP1-201ENST00000318988 FP248Q71RG6 208 aaPredicted RBP15.42■□□□□ 0.06
CTDNEP1-201ENST00000318988 DSCR10P59022 87 aa15.4■□□□□ 0.06
CTDNEP1-201ENST00000318988 PRR4Q16378 134 aa15.37■□□□□ 0.05
CTDNEP1-201ENST00000318988 IGHV6-1A0A0B4J1U7 121 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms