RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 Q8NDZ9 215 aa4.44□□□□□ -1.7
SOX6-201ENST00000316399 CHD9Q3L8U1 2897 aa4.44□□□□□ -1.7
SOX6-201ENST00000316399 A0A087X002 238 aa4.44□□□□□ -1.7
SOX6-201ENST00000316399 LCE6AA0A183 80 aa4.43□□□□□ -1.7
SOX6-201ENST00000316399 A0A1B0GU33 70 aa4.43□□□□□ -1.7
SOX6-201ENST00000316399 MAP1AP78559 2803 aaPredicted RBP4.43□□□□□ -1.7
SOX6-201ENST00000316399 RPS29P62273 56 aaKnown RBP4.43□□□□□ -1.7
SOX6-201ENST00000316399 Q5VV11 94 aa4.43□□□□□ -1.7
SOX6-201ENST00000316399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.41□□□□□ -1.7
SOX6-201ENST00000316399 A0A0G2JQZ4 141 aa4.41□□□□□ -1.7
SOX6-201ENST00000316399 FLNCQ14315 2725 aa4.41□□□□□ -1.7
SOX6-201ENST00000316399 KRTAP29-1A8MX34 341 aaPredicted RBP4.41□□□□□ -1.7
SOX6-201ENST00000316399 Q5W150 140 aa4.41□□□□□ -1.7
SOX6-201ENST00000316399 LINC01554Q52M75 96 aa4.4□□□□□ -1.7
SOX6-201ENST00000316399 TEX15Q9BXT5 2789 aa4.4□□□□□ -1.7
SOX6-201ENST00000316399 PRR26Q8N8Z3 221 aa4.4□□□□□ -1.71
SOX6-201ENST00000316399 J3QL48 77 aa4.38□□□□□ -1.71
SOX6-201ENST00000316399 CYSTM1Q9H1C7 97 aa4.38□□□□□ -1.71
SOX6-201ENST00000316399 COX6B2Q6YFQ2 88 aa4.37□□□□□ -1.71
SOX6-201ENST00000316399 Q8N1X5 172 aa4.37□□□□□ -1.71
SOX6-201ENST00000316399 ANAPC11Q9NYG5 84 aa4.36□□□□□ -1.71
SOX6-201ENST00000316399 C9orf92A6NGG3 77 aa4.36□□□□□ -1.71
SOX6-201ENST00000316399 NIPBLQ6KC79 2804 aaeCLIP4.35□□□□□ -1.71
SOX6-201ENST00000316399 ITPR2Q14571 2701 aa4.35□□□□□ -1.71
SOX6-201ENST00000316399 CSAG1Q6PB30 78 aa4.34□□□□□ -1.71
SOX6-201ENST00000316399 UBR5O95071 2799 aaPredicted RBP4.33□□□□□ -1.72
SOX6-201ENST00000316399 KRTAP1-5Q9BYS1 174 aa4.33□□□□□ -1.72
SOX6-201ENST00000316399 Q6ZSA8 131 aa4.33□□□□□ -1.72
SOX6-201ENST00000316399 OXTP01178 125 aa4.31□□□□□ -1.72
SOX6-201ENST00000316399 ITPR1Q14643 2758 aa4.31□□□□□ -1.72
SOX6-201ENST00000316399 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
SOX6-201ENST00000316399 S4R3F8 94 aa4.29□□□□□ -1.72
SOX6-201ENST00000316399 SPATA8Q6RVD6 105 aa4.29□□□□□ -1.72
SOX6-201ENST00000316399 RPL37P61927 97 aaKnown RBP4.27□□□□□ -1.73
SOX6-201ENST00000316399 SPINK7P58062 85 aa4.26□□□□□ -1.73
SOX6-201ENST00000316399 KRTAP13-1Q8IUC0 172 aa4.26□□□□□ -1.73
SOX6-201ENST00000316399 SEC61BP60468 96 aaKnown RBP4.26□□□□□ -1.73
SOX6-201ENST00000316399 ROMO1P60602 79 aa4.25□□□□□ -1.73
SOX6-201ENST00000316399 A0A0D9SG42 100 aa4.24□□□□□ -1.73
SOX6-201ENST00000316399 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
SOX6-201ENST00000316399 SMR3BP02814 79 aaPredicted RBP4.24□□□□□ -1.73
SOX6-201ENST00000316399 Q6ZRN7 208 aaPredicted RBP4.24□□□□□ -1.73
SOX6-201ENST00000316399 CHD7Q9P2D1 2997 aa4.23□□□□□ -1.73
SOX6-201ENST00000316399 NBEAL2Q6ZNJ1 2754 aa4.23□□□□□ -1.73
SOX6-201ENST00000316399 DSPP15924 2871 aaKnown RBP4.23□□□□□ -1.73
SOX6-201ENST00000316399 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
SOX6-201ENST00000316399 PANO1I0J062 215 aa4.22□□□□□ -1.73
SOX6-201ENST00000316399 A6NN06 94 aa4.21□□□□□ -1.74
SOX6-201ENST00000316399 KRTAP21-3Q3LHN1 58 aa4.21□□□□□ -1.74
SOX6-201ENST00000316399 HIVEP1P15822 2718 aa4.21□□□□□ -1.74
SOX6-201ENST00000316399 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
SOX6-201ENST00000316399 R4GN34 69 aa4.18□□□□□ -1.74
SOX6-201ENST00000316399 APCP25054 2843 aa4.17□□□□□ -1.74
SOX6-201ENST00000316399 M0QZ58 72 aa4.17□□□□□ -1.74
SOX6-201ENST00000316399 KRTAP10-1P60331 282 aa4.17□□□□□ -1.74
SOX6-201ENST00000316399 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
SOX6-201ENST00000316399 KRTAP7-1Q8IUC3 87 aa4.15□□□□□ -1.75
SOX6-201ENST00000316399 Q5VSD8 79 aa4.14□□□□□ -1.75
SOX6-201ENST00000316399 NOTCH2NLQ7Z3S9 236 aa4.13□□□□□ -1.75
SOX6-201ENST00000316399 KRTAP10-2P60368 255 aa4.13□□□□□ -1.75
SOX6-201ENST00000316399 H3BS24 57 aa4.09□□□□□ -1.75
SOX6-201ENST00000316399 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.76
SOX6-201ENST00000316399 A8MUU9 505 aa4.08□□□□□ -1.76
SOX6-201ENST00000316399 KRTAP13-2Q52LG2 175 aa4.08□□□□□ -1.76
SOX6-201ENST00000316399 C20orf166-AS1Q96NR2 134 aa4.08□□□□□ -1.76
SOX6-201ENST00000316399 MGAQ8IWI9 3026 aa4.07□□□□□ -1.76
SOX6-201ENST00000316399 KRTAP11-1Q8IUC1 163 aa4.06□□□□□ -1.76
SOX6-201ENST00000316399 DNAH12Q6ZR08 3092 aa4.05□□□□□ -1.76
SOX6-201ENST00000316399 SRCAPQ6ZRS2 3230 aa4.04□□□□□ -1.76
SOX6-201ENST00000316399 GOLGB1Q14789 3259 aaKnown RBP4.03□□□□□ -1.76
SOX6-201ENST00000316399 A0A0C4DFX4 3053 aa4.03□□□□□ -1.76
SOX6-201ENST00000316399 ADM2Q7Z4H4 148 aa4.03□□□□□ -1.76
SOX6-201ENST00000316399 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
SOX6-201ENST00000316399 M0R2T5 61 aa4.01□□□□□ -1.77
SOX6-201ENST00000316399 KALRNO60229 2985 aa4□□□□□ -1.77
SOX6-201ENST00000316399 NF1P21359 2839 aa4□□□□□ -1.77
SOX6-201ENST00000316399 TENM3Q9P273 2699 aa4□□□□□ -1.77
SOX6-201ENST00000316399 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
SOX6-201ENST00000316399 HTTP42858 3142 aa3.99□□□□□ -1.77
SOX6-201ENST00000316399 TENM4Q6N022 2769 aa3.99□□□□□ -1.77
SOX6-201ENST00000316399 PCNTO95613 3336 aa3.99□□□□□ -1.77
SOX6-201ENST00000316399 UTRNP46939 3433 aa3.98□□□□□ -1.77
SOX6-201ENST00000316399 CEP350Q5VT06 3117 aa3.98□□□□□ -1.77
SOX6-201ENST00000316399 FRYLO94915 3013 aa3.96□□□□□ -1.77
SOX6-201ENST00000316399 KRTAP1-4P0C5Y4 121 aa3.95□□□□□ -1.78
SOX6-201ENST00000316399 TENM1Q9UKZ4 2725 aa3.95□□□□□ -1.78
SOX6-201ENST00000316399 MXRA5Q9NR99 2828 aa3.94□□□□□ -1.78
SOX6-201ENST00000316399 ZANQ9Y493 2812 aa3.94□□□□□ -1.78
SOX6-201ENST00000316399 HRNRQ86YZ3 2850 aaPredicted RBP3.93□□□□□ -1.78
SOX6-201ENST00000316399 CELSR2Q9HCU4 2923 aa3.93□□□□□ -1.78
SOX6-201ENST00000316399 KRTAP16-1A8MUX0 517 aa3.93□□□□□ -1.78
SOX6-201ENST00000316399 TNP1P09430 55 aa3.9□□□□□ -1.79
SOX6-201ENST00000316399 RANBP2P49792 3224 aaKnown RBP3.89□□□□□ -1.79
SOX6-201ENST00000316399 TPRXLQ17RH7 258 aa3.88□□□□□ -1.79
SOX6-201ENST00000316399 LAMA2P24043 3122 aaKnown RBP3.88□□□□□ -1.79
SOX6-201ENST00000316399 LRBAP50851 2863 aa3.88□□□□□ -1.79
SOX6-201ENST00000316399 KRTAP13-3Q3SY46 172 aa3.87□□□□□ -1.79
SOX6-201ENST00000316399 A8MU10 97 aa3.87□□□□□ -1.79
SOX6-201ENST00000316399 NBEAQ8NFP9 2946 aa3.86□□□□□ -1.79
SOX6-201ENST00000316399 XP32Q5T750 250 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms