RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 NSD1Q96L73 2696 aaPredicted RBP3.84□□□□□ -1.79
PRKDC-201ENST00000314191 TNRC18O15417 2968 aaPredicted RBP3.84□□□□□ -1.79
PRKDC-201ENST00000314191 H7BZZ5 65 aa3.84□□□□□ -1.79
PRKDC-201ENST00000314191 ZFHX4Q86UP3 3567 aa3.83□□□□□ -1.8
PRKDC-201ENST00000314191 DCHS1Q96JQ0 3298 aa3.83□□□□□ -1.8
PRKDC-201ENST00000314191 A0A1B0GU69 56 aa3.83□□□□□ -1.8
PRKDC-201ENST00000314191 A0A1B0GVX0 72 aa3.82□□□□□ -1.8
PRKDC-201ENST00000314191 ACYP2P14621 99 aa3.82□□□□□ -1.8
PRKDC-201ENST00000314191 LCA10Q71F78 164 aa3.82□□□□□ -1.8
PRKDC-201ENST00000314191 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
PRKDC-201ENST00000314191 PLAC8Q9NZF1 115 aa3.81□□□□□ -1.8
PRKDC-201ENST00000314191 LOC400499M0QZD8 3231 aa3.81□□□□□ -1.8
PRKDC-201ENST00000314191 KRTAP4-16G5E9R7 235 aaPredicted RBP3.81□□□□□ -1.8
PRKDC-201ENST00000314191 SPINT4Q6UDR6 99 aa3.81□□□□□ -1.8
PRKDC-201ENST00000314191 Q96NJ1 140 aa3.81□□□□□ -1.8
PRKDC-201ENST00000314191 OCR1Q9BZK8 76 aa3.8□□□□□ -1.8
PRKDC-201ENST00000314191 CYSTM1Q9H1C7 97 aa3.8□□□□□ -1.8
PRKDC-201ENST00000314191 SPRR1BP22528 89 aa3.8□□□□□ -1.8
PRKDC-201ENST00000314191 FRYQ5TBA9 3013 aa3.8□□□□□ -1.8
PRKDC-201ENST00000314191 ATMQ13315 3056 aa3.8□□□□□ -1.8
PRKDC-201ENST00000314191 WDFY3Q8IZQ1 3526 aa3.8□□□□□ -1.8
PRKDC-201ENST00000314191 FAM229AH3BQW9 127 aa3.79□□□□□ -1.8
PRKDC-201ENST00000314191 RELNP78509 3460 aa3.79□□□□□ -1.8
PRKDC-201ENST00000314191 KRTAP11-1Q8IUC1 163 aa3.78□□□□□ -1.8
PRKDC-201ENST00000314191 LOC101927531A0A1B0GV80 90 aa3.78□□□□□ -1.8
PRKDC-201ENST00000314191 LINC00336Q6ZUF6 198 aa3.78□□□□□ -1.8
PRKDC-201ENST00000314191 ITPR3Q14573 2671 aa3.78□□□□□ -1.81
PRKDC-201ENST00000314191 KRTAP10-2P60368 255 aa3.77□□□□□ -1.81
PRKDC-201ENST00000314191 BOD1L1Q8NFC6 3051 aa3.77□□□□□ -1.81
PRKDC-201ENST00000314191 ADGRG4Q8IZF6 3080 aa3.77□□□□□ -1.81
PRKDC-201ENST00000314191 A8MUN3 132 aa3.77□□□□□ -1.81
PRKDC-201ENST00000314191 SETXQ7Z333 2677 aaKnown RBP3.77□□□□□ -1.81
PRKDC-201ENST00000314191 COA5Q86WW8 74 aa3.76□□□□□ -1.81
PRKDC-201ENST00000314191 IGLV8-61A0A075B6I0 122 aa3.76□□□□□ -1.81
PRKDC-201ENST00000314191 Q6ZR54 194 aa3.75□□□□□ -1.81
PRKDC-201ENST00000314191 LINC00472Q9H8W2 130 aa3.75□□□□□ -1.81
PRKDC-201ENST00000314191 C9orf92A6NGG3 77 aa3.75□□□□□ -1.81
PRKDC-201ENST00000314191 LINC00304Q8N9R0 145 aa3.75□□□□□ -1.81
PRKDC-201ENST00000314191 MMP24-AS1A0A0U1RRL7 71 aa3.75□□□□□ -1.81
PRKDC-201ENST00000314191 Q6ZRN7 208 aaPredicted RBP3.75□□□□□ -1.81
PRKDC-201ENST00000314191 ASPMQ8IZT6 3477 aa3.75□□□□□ -1.81
PRKDC-201ENST00000314191 H3BS24 57 aa3.75□□□□□ -1.81
PRKDC-201ENST00000314191 ITPR2Q14571 2701 aa3.75□□□□□ -1.81
PRKDC-201ENST00000314191 UQCR11O14957 56 aa3.75□□□□□ -1.81
PRKDC-201ENST00000314191 FRYLO94915 3013 aa3.74□□□□□ -1.81
PRKDC-201ENST00000314191 PRR26Q8N8Z3 221 aa3.74□□□□□ -1.81
PRKDC-201ENST00000314191 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
PRKDC-201ENST00000314191 ITPR1Q14643 2758 aa3.73□□□□□ -1.81
PRKDC-201ENST00000314191 KRTAP10-1P60331 282 aa3.73□□□□□ -1.81
PRKDC-201ENST00000314191 TEP1Q99973 2627 aaKnown RBP3.73□□□□□ -1.81
PRKDC-201ENST00000314191 COL12A1Q99715 3063 aa3.73□□□□□ -1.81
PRKDC-201ENST00000314191 FLNAP21333 2647 aaKnown RBP3.72□□□□□ -1.81
PRKDC-201ENST00000314191 KMT2BQ9UMN6 2715 aaPredicted RBP3.72□□□□□ -1.81
PRKDC-201ENST00000314191 IGSF10Q6WRI0 2623 aa3.72□□□□□ -1.81
PRKDC-201ENST00000314191 CDC42SE1Q9NRR8 79 aa3.71□□□□□ -1.81
PRKDC-201ENST00000314191 DMXL2Q8TDJ6 3036 aa3.71□□□□□ -1.82
PRKDC-201ENST00000314191 UBR5O95071 2799 aaPredicted RBP3.71□□□□□ -1.82
PRKDC-201ENST00000314191 Q1T7F1 81 aa3.71□□□□□ -1.82
PRKDC-201ENST00000314191 CRIPTQ9P021 101 aa3.71□□□□□ -1.82
PRKDC-201ENST00000314191 TEX15Q9BXT5 2789 aa3.71□□□□□ -1.82
PRKDC-201ENST00000314191 APCP25054 2843 aa3.7□□□□□ -1.82
PRKDC-201ENST00000314191 SPANXA2-OT1Q8N9U9 137 aa3.7□□□□□ -1.82
PRKDC-201ENST00000314191 RBM12B-AS1Q9P1G2 102 aa3.69□□□□□ -1.82
PRKDC-201ENST00000314191 DSPP15924 2871 aaKnown RBP3.69□□□□□ -1.82
PRKDC-201ENST00000314191 MIR22HGQ0VDD5 57 aa3.68□□□□□ -1.82
PRKDC-201ENST00000314191 LINC01554Q52M75 96 aa3.68□□□□□ -1.82
PRKDC-201ENST00000314191 Q8N9P0 234 aaPredicted RBP3.68□□□□□ -1.82
PRKDC-201ENST00000314191 DMXL1Q9Y485 3027 aa3.68□□□□□ -1.82
PRKDC-201ENST00000314191 LINC00483Q53H64 154 aa3.68□□□□□ -1.82
PRKDC-201ENST00000314191 OXTP01178 125 aa3.67□□□□□ -1.82
PRKDC-201ENST00000314191 KRTAP29-1A8MX34 341 aaPredicted RBP3.67□□□□□ -1.82
PRKDC-201ENST00000314191 Q8N1X5 172 aa3.67□□□□□ -1.82
PRKDC-201ENST00000314191 FAM229BQ4G0N7 80 aa3.66□□□□□ -1.82
PRKDC-201ENST00000314191 A0A087X002 238 aa3.66□□□□□ -1.82
PRKDC-201ENST00000314191 IGLV7-46A0A075B6I9 117 aa3.66□□□□□ -1.82
PRKDC-201ENST00000314191 NOTCH2NLQ7Z3S9 236 aa3.66□□□□□ -1.82
PRKDC-201ENST00000314191 KRTAP13-1Q8IUC0 172 aa3.65□□□□□ -1.82
PRKDC-201ENST00000314191 A0A0A0MQY5 61 aa3.65□□□□□ -1.82
PRKDC-201ENST00000314191 DMDP11532 3685 aa3.65□□□□□ -1.83
PRKDC-201ENST00000314191 LCE6AA0A183 80 aa3.65□□□□□ -1.83
PRKDC-201ENST00000314191 HRES1P13985 223 aa3.64□□□□□ -1.83
PRKDC-201ENST00000314191 Q5XG85 94 aa3.64□□□□□ -1.83
PRKDC-201ENST00000314191 FBN2P35556 2912 aa3.64□□□□□ -1.83
PRKDC-201ENST00000314191 CFAP47Q6ZTR5 3102 aa3.64□□□□□ -1.83
PRKDC-201ENST00000314191 LRBAP50851 2863 aa3.63□□□□□ -1.83
PRKDC-201ENST00000314191 FP248Q71RG6 208 aaPredicted RBP3.63□□□□□ -1.83
PRKDC-201ENST00000314191 DMAC1Q96GE9 116 aa3.63□□□□□ -1.83
PRKDC-201ENST00000314191 CAMK2N1Q7Z7J9 78 aa3.62□□□□□ -1.83
PRKDC-201ENST00000314191 Q75L30 129 aa3.62□□□□□ -1.83
PRKDC-201ENST00000314191 J3QL48 77 aa3.62□□□□□ -1.83
PRKDC-201ENST00000314191 Q5W150 140 aa3.61□□□□□ -1.83
PRKDC-201ENST00000314191 ASB16-AS1Q495Z4 193 aa3.61□□□□□ -1.83
PRKDC-201ENST00000314191 KRTAP13-2Q52LG2 175 aa3.6□□□□□ -1.83
PRKDC-201ENST00000314191 ZCCHC13Q8WW36 166 aaKnown RBP3.59□□□□□ -1.83
PRKDC-201ENST00000314191 NBEAQ8NFP9 2946 aa3.58□□□□□ -1.84
PRKDC-201ENST00000314191 NIPBLQ6KC79 2804 aaeCLIP3.58□□□□□ -1.841e-6■■□□□ 14.3
PRKDC-201ENST00000314191 TACC2O95359 2948 aa3.57□□□□□ -1.84
PRKDC-201ENST00000314191 LAMA5O15230 3695 aa3.56□□□□□ -1.84
PRKDC-201ENST00000314191 NBEAL2Q6ZNJ1 2754 aa3.55□□□□□ -1.84
PRKDC-201ENST00000314191 LINC01558Q9Y6Z2 57 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms